Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 CYCSP39-201ENST00000565821 309 ntBASIC3.76□□□□□ -1.81
SRGAP3O43295 AC020895.1-201ENST00000595362 272 ntBASIC3.76□□□□□ -1.81
SRGAP3O43295 AC007318.2-201ENST00000620999 243 ntBASIC3.76□□□□□ -1.81
SRGAP3O43295 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SRGAP3O43295 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
SRGAP3O43295 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.76□□□□□ -1.81
SRGAP3O43295 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SRGAP3O43295 MIR411-201ENST00000362239 96 ntBASIC3.75□□□□□ -1.81
SRGAP3O43295 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
SRGAP3O43295 RNU6-1245P-201ENST00000411130 106 ntBASIC3.75□□□□□ -1.81
SRGAP3O43295 HSPE1P25-201ENST00000455484 251 ntBASIC3.75□□□□□ -1.81
SRGAP3O43295 AC006026.2-201ENST00000457376 180 ntBASIC3.75□□□□□ -1.81
SRGAP3O43295 S100A11P2-201ENST00000467589 312 ntBASIC3.75□□□□□ -1.81
SRGAP3O43295 AP000870.1-201ENST00000472927 406 ntBASIC3.75□□□□□ -1.81
SRGAP3O43295 RPL30P1-201ENST00000488676 339 ntBASIC3.75□□□□□ -1.81
SRGAP3O43295 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.75□□□□□ -1.81
SRGAP3O43295 RNU6-1183P-201ENST00000517054 60 ntBASIC3.75□□□□□ -1.81
SRGAP3O43295 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SRGAP3O43295 AP002392.1-201ENST00000537692 208 ntBASIC3.75□□□□□ -1.81
SRGAP3O43295 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
SRGAP3O43295 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.75□□□□□ -1.81
SRGAP3O43295 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.75□□□□□ -1.81
SRGAP3O43295 AC005000.2-201ENST00000605468 310 ntBASIC3.75□□□□□ -1.81
SRGAP3O43295 RPL23AP88-201ENST00000605759 454 ntBASIC3.75□□□□□ -1.81
SRGAP3O43295 AC107294.3-201ENST00000609211 526 ntBASIC3.75□□□□□ -1.81
SRGAP3O43295 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SRGAP3O43295 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.75□□□□□ -1.81
SRGAP3O43295 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
SRGAP3O43295 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
SRGAP3O43295 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
SRGAP3O43295 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
SRGAP3O43295 RNU6-545P-201ENST00000362681 104 ntBASIC3.74□□□□□ -1.81
SRGAP3O43295 RNU6-1286P-201ENST00000383871 107 ntBASIC3.74□□□□□ -1.81
SRGAP3O43295 RNU6-746P-201ENST00000384112 109 ntBASIC3.74□□□□□ -1.81
SRGAP3O43295 MIR493-201ENST00000385254 89 ntBASIC3.74□□□□□ -1.81
SRGAP3O43295 SNORA53-201ENST00000391141 249 ntBASIC3.74□□□□□ -1.81
SRGAP3O43295 PCNPP3-201ENST00000393579 471 ntBASIC3.74□□□□□ -1.81
SRGAP3O43295 RPL21P66-201ENST00000426566 466 ntBASIC3.74□□□□□ -1.81
SRGAP3O43295 AL512844.2-201ENST00000433990 593 ntBASIC3.74□□□□□ -1.81
SRGAP3O43295 AC016700.2-201ENST00000446011 156 ntBASIC3.74□□□□□ -1.81
SRGAP3O43295 HMGN2P21-201ENST00000447764 270 ntBASIC3.74□□□□□ -1.81
SRGAP3O43295 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.74□□□□□ -1.81
SRGAP3O43295 AC087477.1-201ENST00000465747 340 ntBASIC3.74□□□□□ -1.81
SRGAP3O43295 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.74□□□□□ -1.81
SRGAP3O43295 AC091874.1-201ENST00000511402 339 ntBASIC3.74□□□□□ -1.81
SRGAP3O43295 SNORA25.14-201ENST00000516481 132 ntBASIC3.74□□□□□ -1.81
SRGAP3O43295 RNA5SP380-201ENST00000517190 98 ntBASIC3.74□□□□□ -1.81
SRGAP3O43295 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.74□□□□□ -1.81
SRGAP3O43295 RMST_6.1-201ENST00000611980 203 ntBASIC3.74□□□□□ -1.81
SRGAP3O43295 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
SRGAP3O43295 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SRGAP3O43295 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SRGAP3O43295 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.74□□□□□ -1.81
SRGAP3O43295 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
SRGAP3O43295 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SRGAP3O43295 FTLP6-201ENST00000355274 422 ntBASIC3.73□□□□□ -1.81
SRGAP3O43295 MIR148B-201ENST00000362252 99 ntBASIC3.73□□□□□ -1.81
SRGAP3O43295 Y_RNA.44-201ENST00000362676 108 ntBASIC3.73□□□□□ -1.81
SRGAP3O43295 RNA5SP361-201ENST00000362686 118 ntBASIC3.73□□□□□ -1.81
SRGAP3O43295 Z98749.2-208ENST00000381646 500 ntBASIC3.73□□□□□ -1.81
SRGAP3O43295 RNU6-187P-201ENST00000384139 106 ntBASIC3.73□□□□□ -1.81
SRGAP3O43295 RNU6-318P-201ENST00000384283 103 ntBASIC3.73□□□□□ -1.81
SRGAP3O43295 RNU6-541P-201ENST00000384709 110 ntBASIC3.73□□□□□ -1.81
SRGAP3O43295 MIR153-2-201ENST00000385225 87 ntBASIC3.73□□□□□ -1.81
SRGAP3O43295 RNU4-30P-201ENST00000410245 143 ntBASIC3.73□□□□□ -1.81
SRGAP3O43295 EIF1AXP1-201ENST00000419267 435 ntBASIC3.73□□□□□ -1.81
SRGAP3O43295 FTH1P6-201ENST00000430768 320 ntBASIC3.73□□□□□ -1.81
SRGAP3O43295 AC005002.2-201ENST00000438228 269 ntBASIC3.73□□□□□ -1.81
SRGAP3O43295 AL392103.1-201ENST00000447000 198 ntBASIC3.73□□□□□ -1.81
SRGAP3O43295 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.73□□□□□ -1.81
SRGAP3O43295 SNRPGP7-201ENST00000469016 106 ntBASIC3.73□□□□□ -1.81
SRGAP3O43295 AC092185.1-201ENST00000491371 97 ntBASIC3.73□□□□□ -1.81
SRGAP3O43295 AF186996.7-201ENST00000492781 209 ntBASIC3.73□□□□□ -1.81
SRGAP3O43295 RNU1-103P-201ENST00000516502 125 ntBASIC3.73□□□□□ -1.81
SRGAP3O43295 LINC00933-203ENST00000559812 219 ntBASIC3.73□□□□□ -1.81
SRGAP3O43295 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.73□□□□□ -1.81
SRGAP3O43295 MIR3133-201ENST00000583157 78 ntBASIC3.73□□□□□ -1.81
SRGAP3O43295 AC024153.1-201ENST00000603103 365 ntBASIC3.73□□□□□ -1.81
SRGAP3O43295 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.73□□□□□ -1.81
SRGAP3O43295 AC037487.3-201ENST00000606668 112 ntBASIC3.73□□□□□ -1.81
SRGAP3O43295 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.73□□□□□ -1.81
SRGAP3O43295 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
SRGAP3O43295 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
SRGAP3O43295 AL079305.1-201ENST00000623159 3008 ntBASIC3.72□□□□□ -1.81
SRGAP3O43295 Y_RNA.76-201ENST00000362931 109 ntBASIC3.72□□□□□ -1.81
SRGAP3O43295 SNORD115-32-201ENST00000364079 82 ntBASIC3.72□□□□□ -1.81
SRGAP3O43295 SNORA7.2-201ENST00000364446 145 ntBASIC3.72□□□□□ -1.81
SRGAP3O43295 RNU1-140P-201ENST00000365040 165 ntBASIC3.72□□□□□ -1.81
SRGAP3O43295 RNU6-378P-201ENST00000384324 107 ntBASIC3.72□□□□□ -1.81
SRGAP3O43295 SNORA46-201ENST00000384762 135 ntBASIC3.72□□□□□ -1.81
SRGAP3O43295 RPS4XP3-201ENST00000398541 413 ntBASIC3.72□□□□□ -1.81
SRGAP3O43295 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.72□□□□□ -1.81
SRGAP3O43295 SNORD12B-201ENST00000410433 91 ntBASIC3.72□□□□□ -1.81
SRGAP3O43295 EIF1P2-201ENST00000428233 350 ntBASIC3.72□□□□□ -1.81
SRGAP3O43295 AC243964.1-201ENST00000441814 261 ntBASIC3.72□□□□□ -1.81
SRGAP3O43295 AL031659.1-201ENST00000447075 539 ntBASIC3.72□□□□□ -1.81
SRGAP3O43295 RPS29P2-201ENST00000479278 136 ntBASIC3.72□□□□□ -1.81
SRGAP3O43295 AC107393.1-201ENST00000512403 346 ntBASIC3.72□□□□□ -1.81
SRGAP3O43295 AC087441.2-201ENST00000529141 262 ntBASIC3.72□□□□□ -1.81
SRGAP3O43295 CBX3P4-201ENST00000538909 354 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms