Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 AC000403.1-201ENST00000613696 3585 ntBASIC7.23□□□□□ -1.25
MSH5O43196 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
MSH5O43196 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
MSH5O43196 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
MSH5O43196 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
MSH5O43196 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
MSH5O43196 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
MSH5O43196 Y_RNA.36-201ENST00000362602 112 ntBASIC7.22□□□□□ -1.25
MSH5O43196 RNU6-1235P-201ENST00000384559 107 ntBASIC7.22□□□□□ -1.25
MSH5O43196 MIR153-1-201ENST00000384914 90 ntBASIC7.22□□□□□ -1.25
MSH5O43196 RNA5SP91-201ENST00000390902 119 ntBASIC7.22□□□□□ -1.25
MSH5O43196 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC7.22□□□□□ -1.25
MSH5O43196 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC7.22□□□□□ -1.25
MSH5O43196 RNU6-498P-201ENST00000459468 107 ntBASIC7.22□□□□□ -1.25
MSH5O43196 RNU6-1282P-201ENST00000516735 96 ntBASIC7.22□□□□□ -1.25
MSH5O43196 MIR4330-201ENST00000579077 105 ntBASIC7.22□□□□□ -1.25
MSH5O43196 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC7.22□□□□□ -1.25
MSH5O43196 MIR3934-201ENST00000579806 107 ntBASIC7.22□□□□□ -1.25
MSH5O43196 MIR4697-201ENST00000582977 78 ntBASIC7.22□□□□□ -1.25
MSH5O43196 SNRPGP15-201ENST00000600149 222 ntBASIC7.22□□□□□ -1.25
MSH5O43196 AC103810.6-201ENST00000606708 136 ntBASIC7.22□□□□□ -1.25
MSH5O43196 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC7.22□□□□□ -1.25
MSH5O43196 MIR378J-201ENST00000611988 109 ntBASIC7.22□□□□□ -1.25
MSH5O43196 AC092634.7-201ENST00000621022 103 ntBASIC7.22□□□□□ -1.25
MSH5O43196 AP000346.3-201ENST00000622821 210 ntBASIC7.22□□□□□ -1.25
MSH5O43196 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
MSH5O43196 MAPK10-349ENST00000641767 3661 ntBASIC7.22□□□□□ -1.25
MSH5O43196 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC7.22□□□□□ -1.25
MSH5O43196 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
MSH5O43196 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
MSH5O43196 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
MSH5O43196 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
MSH5O43196 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
MSH5O43196 SCARNA15-201ENST00000607520 4325 ntBASIC7.21□□□□□ -1.25
MSH5O43196 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
MSH5O43196 Y_RNA.241-201ENST00000364470 117 ntBASIC7.21□□□□□ -1.26
MSH5O43196 SNORA11-201ENST00000408789 128 ntBASIC7.21□□□□□ -1.26
MSH5O43196 CRIP1P1-201ENST00000427567 185 ntBASIC7.21□□□□□ -1.26
MSH5O43196 AC012616.1-201ENST00000600294 197 ntBASIC7.21□□□□□ -1.26
MSH5O43196 FAM25E-202ENST00000608562 189 ntBASIC7.21□□□□□ -1.26
MSH5O43196 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC7.21□□□□□ -1.26
MSH5O43196 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC7.21□□□□□ -1.26
MSH5O43196 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC7.21□□□□□ -1.26
MSH5O43196 USP8P1-201ENST00000494673 3183 ntBASIC7.21□□□□□ -1.26
MSH5O43196 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
MSH5O43196 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
MSH5O43196 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
MSH5O43196 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
MSH5O43196 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
MSH5O43196 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
MSH5O43196 AC009487.4-201ENST00000624969 3585 ntBASIC7.2□□□□□ -1.26
MSH5O43196 BCORP1-203ENST00000513194 5093 ntBASIC7.2□□□□□ -1.26
MSH5O43196 RNU6-446P-201ENST00000362827 106 ntBASIC7.2□□□□□ -1.26
MSH5O43196 RNA5SP335-201ENST00000363817 110 ntBASIC7.2□□□□□ -1.26
MSH5O43196 RNU2-7P-201ENST00000410794 178 ntBASIC7.2□□□□□ -1.26
MSH5O43196 RNU6-177P-201ENST00000411257 104 ntBASIC7.2□□□□□ -1.26
MSH5O43196 RPL23AP93-201ENST00000440847 484 ntBASIC7.2□□□□□ -1.26
MSH5O43196 MIR2117-201ENST00000516780 80 ntBASIC7.2□□□□□ -1.26
MSH5O43196 AP004607.2-201ENST00000533949 322 ntBASIC7.2□□□□□ -1.26
MSH5O43196 AC069240.1-201ENST00000548774 375 ntBASIC7.2□□□□□ -1.26
MSH5O43196 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC7.2□□□□□ -1.26
MSH5O43196 MIR4512-201ENST00000583257 77 ntBASIC7.2□□□□□ -1.26
MSH5O43196 AC008739.2-201ENST00000597006 317 ntBASIC7.2□□□□□ -1.26
MSH5O43196 AC007496.3-201ENST00000624987 3443 ntBASIC7.2□□□□□ -1.26
MSH5O43196 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC7.2□□□□□ -1.26
MSH5O43196 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC7.2□□□□□ -1.26
MSH5O43196 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
MSH5O43196 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
MSH5O43196 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC7.2□□□□□ -1.26
MSH5O43196 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
MSH5O43196 AC083899.1-201ENST00000454465 3819 ntBASIC7.19□□□□□ -1.26
MSH5O43196 AL450345.1-202ENST00000605741 3881 ntBASIC7.19□□□□□ -1.26
MSH5O43196 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
MSH5O43196 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
MSH5O43196 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
MSH5O43196 Y_RNA.267-201ENST00000364679 109 ntBASIC7.19□□□□□ -1.26
MSH5O43196 RNU6ATAC7P-201ENST00000408111 127 ntBASIC7.19□□□□□ -1.26
MSH5O43196 AC114755.2-201ENST00000413520 361 ntBASIC7.19□□□□□ -1.26
MSH5O43196 AC015818.7-201ENST00000428754 109 ntBASIC7.19□□□□□ -1.26
MSH5O43196 RN7SL447P-201ENST00000494711 245 ntBASIC7.19□□□□□ -1.26
MSH5O43196 uc_338.18-201ENST00000615451 175 ntBASIC7.19□□□□□ -1.26
MSH5O43196 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
MSH5O43196 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC7.19□□□□□ -1.26
MSH5O43196 AL034549.2-201ENST00000618285 3373 ntBASIC7.19□□□□□ -1.26
MSH5O43196 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
MSH5O43196 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
MSH5O43196 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
MSH5O43196 AC022893.2-201ENST00000564832 3296 ntBASIC7.18□□□□□ -1.26
MSH5O43196 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
MSH5O43196 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC7.18□□□□□ -1.26
MSH5O43196 U3.2-201ENST00000362981 210 ntBASIC7.18□□□□□ -1.26
MSH5O43196 RNU6-1019P-201ENST00000364424 107 ntBASIC7.18□□□□□ -1.26
MSH5O43196 Y_RNA.448-201ENST00000384185 108 ntBASIC7.18□□□□□ -1.26
MSH5O43196 AC107083.1-201ENST00000439643 279 ntBASIC7.18□□□□□ -1.26
MSH5O43196 PTMAP3-201ENST00000447474 330 ntBASIC7.18□□□□□ -1.26
MSH5O43196 AC110768.1-201ENST00000509222 400 ntBASIC7.18□□□□□ -1.26
MSH5O43196 RNU6-881P-201ENST00000516813 102 ntBASIC7.18□□□□□ -1.26
MSH5O43196 AC092490.3-201ENST00000545370 572 ntBASIC7.18□□□□□ -1.26
MSH5O43196 RN7SL52P-201ENST00000584271 284 ntBASIC7.18□□□□□ -1.26
MSH5O43196 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms