Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SMAD9O15198 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SMAD9O15198 RNU6-859P-201ENST00000362728 107 ntBASIC2.38□□□□□ -2.03
SMAD9O15198 Y_RNA.142-201ENST00000363491 102 ntBASIC2.38□□□□□ -2.03
SMAD9O15198 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
SMAD9O15198 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
SMAD9O15198 RNU2-52P-201ENST00000410680 190 ntBASIC2.38□□□□□ -2.03
SMAD9O15198 NCOR1P3-201ENST00000420479 303 ntBASIC2.38□□□□□ -2.03
SMAD9O15198 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.38□□□□□ -2.03
SMAD9O15198 AL161788.1-201ENST00000441805 169 ntBASIC2.38□□□□□ -2.03
SMAD9O15198 AC108938.1-201ENST00000451204 136 ntBASIC2.38□□□□□ -2.03
SMAD9O15198 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.38□□□□□ -2.03
SMAD9O15198 RPS3P1-201ENST00000456781 192 ntBASIC2.38□□□□□ -2.03
SMAD9O15198 AC116337.1-201ENST00000509680 687 ntBASIC2.38□□□□□ -2.03
SMAD9O15198 Y_RNA.702-201ENST00000516843 96 ntBASIC2.38□□□□□ -2.03
SMAD9O15198 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.38□□□□□ -2.03
SMAD9O15198 IMMP1LP2-201ENST00000552954 492 ntBASIC2.38□□□□□ -2.03
SMAD9O15198 AC021231.3-201ENST00000558497 370 ntBASIC2.38□□□□□ -2.03
SMAD9O15198 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.38□□□□□ -2.03
SMAD9O15198 MIR4635-201ENST00000583759 79 ntBASIC2.38□□□□□ -2.03
SMAD9O15198 AC060766.3-201ENST00000591442 263 ntBASIC2.38□□□□□ -2.03
SMAD9O15198 MIR6715A-201ENST00000615929 79 ntBASIC2.38□□□□□ -2.03
SMAD9O15198 AC092794.2-201ENST00000620933 563 ntBASIC2.38□□□□□ -2.03
SMAD9O15198 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SMAD9O15198 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.38□□□□□ -2.03
SMAD9O15198 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SMAD9O15198 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.38□□□□□ -2.03
SMAD9O15198 RNU4-82P-201ENST00000362443 140 ntBASIC2.37□□□□□ -2.03
SMAD9O15198 Y_RNA.339-201ENST00000365325 102 ntBASIC2.37□□□□□ -2.03
SMAD9O15198 RNU6-968P-201ENST00000384076 107 ntBASIC2.37□□□□□ -2.03
SMAD9O15198 SNORA36A-201ENST00000384221 132 ntBASIC2.37□□□□□ -2.03
SMAD9O15198 RN7SKP158-201ENST00000410453 326 ntBASIC2.37□□□□□ -2.03
SMAD9O15198 HMGB3P2-201ENST00000411913 584 ntBASIC2.37□□□□□ -2.03
SMAD9O15198 OOSP1P1-201ENST00000423265 274 ntBASIC2.37□□□□□ -2.03
SMAD9O15198 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.37□□□□□ -2.03
SMAD9O15198 AP000705.1-201ENST00000454567 350 ntBASIC2.37□□□□□ -2.03
SMAD9O15198 MTND4P17-201ENST00000470444 350 ntBASIC2.37□□□□□ -2.03
SMAD9O15198 AC091951.2-201ENST00000500762 203 ntBASIC2.37□□□□□ -2.03
SMAD9O15198 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.37□□□□□ -2.03
SMAD9O15198 Y_RNA.691-201ENST00000516611 103 ntBASIC2.37□□□□□ -2.03
SMAD9O15198 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.37□□□□□ -2.03
SMAD9O15198 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.37□□□□□ -2.03
SMAD9O15198 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.37□□□□□ -2.03
SMAD9O15198 AC063943.3-201ENST00000615562 356 ntBASIC2.37□□□□□ -2.03
SMAD9O15198 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SMAD9O15198 RNU6-784P-201ENST00000384330 106 ntBASIC2.36□□□□□ -2.03
SMAD9O15198 RNU6-601P-201ENST00000384540 107 ntBASIC2.36□□□□□ -2.03
SMAD9O15198 RNU6-1274P-201ENST00000384557 107 ntBASIC2.36□□□□□ -2.03
SMAD9O15198 MIR29B2-201ENST00000385055 81 ntBASIC2.36□□□□□ -2.03
SMAD9O15198 MIR524-201ENST00000385242 87 ntBASIC2.36□□□□□ -2.03
SMAD9O15198 SNORA26.3-201ENST00000391119 136 ntBASIC2.36□□□□□ -2.03
SMAD9O15198 USP9YP30-201ENST00000430729 455 ntBASIC2.36□□□□□ -2.03
SMAD9O15198 ARL5AP4-201ENST00000430731 512 ntBASIC2.36□□□□□ -2.03
SMAD9O15198 HMGB3P3-201ENST00000510526 400 ntBASIC2.36□□□□□ -2.03
SMAD9O15198 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.36□□□□□ -2.03
SMAD9O15198 RNU6-507P-201ENST00000516045 100 ntBASIC2.36□□□□□ -2.03
SMAD9O15198 RNU6-1016P-201ENST00000516689 94 ntBASIC2.36□□□□□ -2.03
SMAD9O15198 RNA5SP82-201ENST00000516707 92 ntBASIC2.36□□□□□ -2.03
SMAD9O15198 RNU6-567P-201ENST00000516746 107 ntBASIC2.36□□□□□ -2.03
SMAD9O15198 AC105029.1-201ENST00000520250 669 ntBASIC2.36□□□□□ -2.03
SMAD9O15198 AC009127.3-201ENST00000570531 403 ntBASIC2.36□□□□□ -2.03
SMAD9O15198 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.36□□□□□ -2.03
SMAD9O15198 MIR3923-201ENST00000579521 83 ntBASIC2.36□□□□□ -2.03
SMAD9O15198 FGF7P1-201ENST00000582820 288 ntBASIC2.36□□□□□ -2.03
SMAD9O15198 MIR4273-201ENST00000582824 84 ntBASIC2.36□□□□□ -2.03
SMAD9O15198 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.36□□□□□ -2.03
SMAD9O15198 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.36□□□□□ -2.03
SMAD9O15198 AL450472.1-202ENST00000637286 180 ntBASIC2.36□□□□□ -2.03
SMAD9O15198 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SMAD9O15198 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.36□□□□□ -2.03
SMAD9O15198 Z82195.2-201ENST00000612348 18351 ntBASIC2.36□□□□□ -2.03
SMAD9O15198 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
SMAD9O15198 RNU6-1059P-201ENST00000363752 98 ntBASIC2.35□□□□□ -2.03
SMAD9O15198 RNU6-593P-201ENST00000364716 112 ntBASIC2.35□□□□□ -2.03
SMAD9O15198 RNU6-1009P-201ENST00000390996 107 ntBASIC2.35□□□□□ -2.03
SMAD9O15198 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.35□□□□□ -2.03
SMAD9O15198 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.35□□□□□ -2.03
SMAD9O15198 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.35□□□□□ -2.03
SMAD9O15198 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.35□□□□□ -2.03
SMAD9O15198 AC093019.1-201ENST00000443135 252 ntBASIC2.35□□□□□ -2.03
SMAD9O15198 Y_RNA.635-201ENST00000459041 101 ntBASIC2.35□□□□□ -2.03
SMAD9O15198 TRBV12-1-201ENST00000479785 344 ntBASIC2.35□□□□□ -2.03
SMAD9O15198 AC145146.1-201ENST00000496370 254 ntBASIC2.35□□□□□ -2.03
SMAD9O15198 RNU6-875P-201ENST00000516488 106 ntBASIC2.35□□□□□ -2.03
SMAD9O15198 MRPS36P4-201ENST00000534436 298 ntBASIC2.35□□□□□ -2.03
SMAD9O15198 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.35□□□□□ -2.03
SMAD9O15198 AC109446.1-201ENST00000566172 220 ntBASIC2.35□□□□□ -2.03
SMAD9O15198 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.35□□□□□ -2.03
SMAD9O15198 AL078605.1-201ENST00000603529 500 ntBASIC2.35□□□□□ -2.03
SMAD9O15198 Z98751.3-201ENST00000604447 521 ntBASIC2.35□□□□□ -2.03
SMAD9O15198 SNORD14A-201ENST00000606526 91 ntBASIC2.35□□□□□ -2.03
SMAD9O15198 AC104260.1-201ENST00000616660 539 ntBASIC2.35□□□□□ -2.03
SMAD9O15198 AC099654.5-201ENST00000636479 350 ntBASIC2.35□□□□□ -2.03
SMAD9O15198 ZNF271P-202ENST00000465539 1970 ntBASIC2.35□□□□□ -2.03
SMAD9O15198 AC069528.2-201ENST00000624849 1991 ntBASIC2.35□□□□□ -2.03
SMAD9O15198 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SMAD9O15198 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
SMAD9O15198 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
SMAD9O15198 AC233981.2-201ENST00000611524 1614 ntBASIC2.35□□□□□ -2.03
SMAD9O15198 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms