Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
AP3D1O14617 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
AP3D1O14617 AP006437.1-201ENST00000641440 3685 ntBASIC2.33□□□□□ -2.04
AP3D1O14617 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
AP3D1O14617 RNU5B-2P-201ENST00000363036 113 ntBASIC2.33□□□□□ -2.04
AP3D1O14617 RNU6-743P-201ENST00000364151 106 ntBASIC2.33□□□□□ -2.04
AP3D1O14617 SNORD116-11-201ENST00000383882 92 ntBASIC2.33□□□□□ -2.04
AP3D1O14617 SNORA29-201ENST00000384183 140 ntBASIC2.33□□□□□ -2.04
AP3D1O14617 RNU6-831P-201ENST00000384548 107 ntBASIC2.33□□□□□ -2.04
AP3D1O14617 MIR521-1-201ENST00000384902 87 ntBASIC2.33□□□□□ -2.04
AP3D1O14617 MIR518A2-201ENST00000384966 87 ntBASIC2.33□□□□□ -2.04
AP3D1O14617 Y_RNA.599-201ENST00000410489 109 ntBASIC2.33□□□□□ -2.04
AP3D1O14617 Y_RNA.619-201ENST00000410951 90 ntBASIC2.33□□□□□ -2.04
AP3D1O14617 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.33□□□□□ -2.04
AP3D1O14617 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.33□□□□□ -2.04
AP3D1O14617 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.33□□□□□ -2.04
AP3D1O14617 MIR449C-201ENST00000516047 92 ntBASIC2.33□□□□□ -2.04
AP3D1O14617 HSPE1P18-201ENST00000517602 280 ntBASIC2.33□□□□□ -2.04
AP3D1O14617 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.33□□□□□ -2.04
AP3D1O14617 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.33□□□□□ -2.04
AP3D1O14617 AC109446.1-201ENST00000566172 220 ntBASIC2.33□□□□□ -2.04
AP3D1O14617 MIR4319-201ENST00000577285 85 ntBASIC2.33□□□□□ -2.04
AP3D1O14617 SNORA59B-202ENST00000578183 701 ntBASIC2.33□□□□□ -2.04
AP3D1O14617 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.32□□□□□ -2.04
AP3D1O14617 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.32□□□□□ -2.04
AP3D1O14617 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.32□□□□□ -2.04
AP3D1O14617 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.32□□□□□ -2.04
AP3D1O14617 Y_RNA.151-201ENST00000363566 112 ntBASIC2.32□□□□□ -2.04
AP3D1O14617 RNU6-234P-201ENST00000365229 104 ntBASIC2.32□□□□□ -2.04
AP3D1O14617 U8.8-201ENST00000365399 135 ntBASIC2.32□□□□□ -2.04
AP3D1O14617 SNORD14D-201ENST00000384390 87 ntBASIC2.32□□□□□ -2.04
AP3D1O14617 SNORA80E-201ENST00000384744 137 ntBASIC2.32□□□□□ -2.04
AP3D1O14617 MIR29C-201ENST00000385231 88 ntBASIC2.32□□□□□ -2.04
AP3D1O14617 MIR208B-201ENST00000401172 77 ntBASIC2.32□□□□□ -2.04
AP3D1O14617 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.32□□□□□ -2.04
AP3D1O14617 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.32□□□□□ -2.04
AP3D1O14617 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.32□□□□□ -2.04
AP3D1O14617 AC245102.2-201ENST00000448956 180 ntBASIC2.32□□□□□ -2.04
AP3D1O14617 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.32□□□□□ -2.04
AP3D1O14617 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.32□□□□□ -2.04
AP3D1O14617 AC093259.1-201ENST00000509755 300 ntBASIC2.32□□□□□ -2.04
AP3D1O14617 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.32□□□□□ -2.04
AP3D1O14617 AC107222.1-201ENST00000510899 637 ntBASIC2.32□□□□□ -2.04
AP3D1O14617 AC005741.1-201ENST00000511094 432 ntBASIC2.32□□□□□ -2.04
AP3D1O14617 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.32□□□□□ -2.04
AP3D1O14617 RNA5SP356-201ENST00000515972 94 ntBASIC2.32□□□□□ -2.04
AP3D1O14617 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.32□□□□□ -2.04
AP3D1O14617 AC078899.2-201ENST00000595282 212 ntBASIC2.32□□□□□ -2.04
AP3D1O14617 MIR3976-201ENST00000606807 139 ntBASIC2.32□□□□□ -2.04
AP3D1O14617 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.32□□□□□ -2.04
AP3D1O14617 AC092608.2-201ENST00000624427 218 ntBASIC2.32□□□□□ -2.04
AP3D1O14617 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
AP3D1O14617 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.32□□□□□ -2.04
AP3D1O14617 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
AP3D1O14617 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
AP3D1O14617 AC062016.1-201ENST00000355719 319 ntBASIC2.31□□□□□ -2.04
AP3D1O14617 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.31□□□□□ -2.04
AP3D1O14617 AL357139.1-201ENST00000407792 426 ntBASIC2.31□□□□□ -2.04
AP3D1O14617 RPS26P42-201ENST00000413485 326 ntBASIC2.31□□□□□ -2.04
AP3D1O14617 DAP3P1-201ENST00000441522 278 ntBASIC2.31□□□□□ -2.04
AP3D1O14617 AC108938.1-201ENST00000451204 136 ntBASIC2.31□□□□□ -2.04
AP3D1O14617 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.31□□□□□ -2.04
AP3D1O14617 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.31□□□□□ -2.04
AP3D1O14617 PCMTD1P1-201ENST00000455560 355 ntBASIC2.31□□□□□ -2.04
AP3D1O14617 AC130509.1-201ENST00000464158 433 ntBASIC2.31□□□□□ -2.04
AP3D1O14617 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.31□□□□□ -2.04
AP3D1O14617 MRPS36P4-201ENST00000534436 298 ntBASIC2.31□□□□□ -2.04
AP3D1O14617 PRELID2P1-201ENST00000552837 301 ntBASIC2.31□□□□□ -2.04
AP3D1O14617 AC018638.8-201ENST00000588755 281 ntBASIC2.31□□□□□ -2.04
AP3D1O14617 AC092794.1-201ENST00000612734 582 ntBASIC2.31□□□□□ -2.04
AP3D1O14617 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
AP3D1O14617 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.31□□□□□ -2.04
AP3D1O14617 Y_RNA.99-201ENST00000363138 105 ntBASIC2.3□□□□□ -2.04
AP3D1O14617 RNU6-968P-201ENST00000384076 107 ntBASIC2.3□□□□□ -2.04
AP3D1O14617 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
AP3D1O14617 AC063976.3-201ENST00000426849 329 ntBASIC2.3□□□□□ -2.04
AP3D1O14617 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.3□□□□□ -2.04
AP3D1O14617 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.3□□□□□ -2.04
AP3D1O14617 snoU13.6-201ENST00000458785 104 ntBASIC2.3□□□□□ -2.04
AP3D1O14617 AC069439.1-201ENST00000494739 167 ntBASIC2.3□□□□□ -2.04
AP3D1O14617 RNU6-991P-201ENST00000516168 107 ntBASIC2.3□□□□□ -2.04
AP3D1O14617 AF235103.2-201ENST00000525753 346 ntBASIC2.3□□□□□ -2.04
AP3D1O14617 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.3□□□□□ -2.04
AP3D1O14617 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.3□□□□□ -2.04
AP3D1O14617 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.3□□□□□ -2.04
AP3D1O14617 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
AP3D1O14617 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
AP3D1O14617 RNU6-1159P-201ENST00000362933 107 ntBASIC2.29□□□□□ -2.04
AP3D1O14617 RNA5SP456-201ENST00000364002 114 ntBASIC2.29□□□□□ -2.04
AP3D1O14617 RNU6-1164P-201ENST00000364428 107 ntBASIC2.29□□□□□ -2.04
AP3D1O14617 RNU6-1013P-201ENST00000384180 107 ntBASIC2.29□□□□□ -2.04
AP3D1O14617 RNU6-790P-201ENST00000384479 105 ntBASIC2.29□□□□□ -2.04
AP3D1O14617 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.29□□□□□ -2.04
AP3D1O14617 RNU2-41P-201ENST00000410991 178 ntBASIC2.29□□□□□ -2.04
AP3D1O14617 RNA5SP450-201ENST00000411206 102 ntBASIC2.29□□□□□ -2.04
AP3D1O14617 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.29□□□□□ -2.04
AP3D1O14617 NFU1P2-201ENST00000448700 469 ntBASIC2.29□□□□□ -2.04
AP3D1O14617 RNA5SP320-201ENST00000516263 124 ntBASIC2.29□□□□□ -2.04
AP3D1O14617 RNU6-1088P-201ENST00000516850 104 ntBASIC2.29□□□□□ -2.04
AP3D1O14617 MTND4LP26-201ENST00000518144 282 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms