Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AC123900.1-201ENST00000420390 96 ntBASIC0.91□□□□□ -2.26
UBFD1O14562 MTND4P20-201ENST00000424125 869 ntBASIC0.91□□□□□ -2.26
UBFD1O14562 AC139712.2-201ENST00000424302 339 ntBASIC0.91□□□□□ -2.26
UBFD1O14562 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
UBFD1O14562 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.91□□□□□ -2.26
UBFD1O14562 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.91□□□□□ -2.26
UBFD1O14562 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.91□□□□□ -2.26
UBFD1O14562 C8orf59P1-201ENST00000429930 303 ntBASIC0.91□□□□□ -2.26
UBFD1O14562 AL512286.1-201ENST00000439244 400 ntBASIC0.91□□□□□ -2.26
UBFD1O14562 EPS15P1-201ENST00000448836 336 ntBASIC0.91□□□□□ -2.26
UBFD1O14562 RPS27AP8-201ENST00000452665 445 ntBASIC0.91□□□□□ -2.26
UBFD1O14562 AC112492.4-201ENST00000456549 352 ntBASIC0.91□□□□□ -2.26
UBFD1O14562 RNU1-131P-201ENST00000458943 161 ntBASIC0.91□□□□□ -2.26
UBFD1O14562 AC092991.1-201ENST00000477176 376 ntBASIC0.91□□□□□ -2.26
UBFD1O14562 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.91□□□□□ -2.26
UBFD1O14562 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC0.91□□□□□ -2.26
UBFD1O14562 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.91□□□□□ -2.26
UBFD1O14562 SNORA31.16-201ENST00000516773 139 ntBASIC0.91□□□□□ -2.26
UBFD1O14562 RNA5SP437-201ENST00000517249 129 ntBASIC0.91□□□□□ -2.26
UBFD1O14562 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.91□□□□□ -2.26
UBFD1O14562 RPL21P5-201ENST00000554662 472 ntBASIC0.91□□□□□ -2.26
UBFD1O14562 AC005668.1-201ENST00000571142 476 ntBASIC0.91□□□□□ -2.26
UBFD1O14562 MIR5692A1-201ENST00000580523 69 ntBASIC0.91□□□□□ -2.26
UBFD1O14562 HSPE1P19-201ENST00000603327 295 ntBASIC0.91□□□□□ -2.26
UBFD1O14562 AC016727.2-201ENST00000603988 621 ntBASIC0.91□□□□□ -2.26
UBFD1O14562 AC138749.5-201ENST00000611461 208 ntBASIC0.91□□□□□ -2.26
UBFD1O14562 AC116165.2-201ENST00000616705 206 ntBASIC0.91□□□□□ -2.26
UBFD1O14562 MIR8063-201ENST00000621930 81 ntBASIC0.91□□□□□ -2.26
UBFD1O14562 AL078595.3-201ENST00000623815 1166 ntBASIC0.91□□□□□ -2.26
UBFD1O14562 Z69720.2-201ENST00000624755 279 ntBASIC0.91□□□□□ -2.26
UBFD1O14562 SNORD98-201ENST00000636377 67 ntBASIC0.91□□□□□ -2.26
UBFD1O14562 AC099654.13-201ENST00000639774 207 ntBASIC0.91□□□□□ -2.26
UBFD1O14562 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.91□□□□□ -2.26
UBFD1O14562 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.9□□□□□ -2.26
UBFD1O14562 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.9□□□□□ -2.27
UBFD1O14562 RNU6-501P-201ENST00000364072 100 ntBASIC0.9□□□□□ -2.27
UBFD1O14562 SNORD115-7-201ENST00000365306 82 ntBASIC0.9□□□□□ -2.27
UBFD1O14562 RNU6-116P-201ENST00000384042 109 ntBASIC0.9□□□□□ -2.27
UBFD1O14562 MRPL42P2-201ENST00000403169 426 ntBASIC0.9□□□□□ -2.27
UBFD1O14562 MIR1267-201ENST00000408723 78 ntBASIC0.9□□□□□ -2.27
UBFD1O14562 RNU6-293P-201ENST00000411259 106 ntBASIC0.9□□□□□ -2.27
UBFD1O14562 UBE2V1P8-201ENST00000437166 265 ntBASIC0.9□□□□□ -2.27
UBFD1O14562 HSPE1P9-201ENST00000440046 311 ntBASIC0.9□□□□□ -2.27
UBFD1O14562 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.9□□□□□ -2.27
UBFD1O14562 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.9□□□□□ -2.27
UBFD1O14562 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.9□□□□□ -2.27
UBFD1O14562 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.9□□□□□ -2.27
UBFD1O14562 RAP1BP2-201ENST00000478270 544 ntBASIC0.9□□□□□ -2.27
UBFD1O14562 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.9□□□□□ -2.27
UBFD1O14562 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.9□□□□□ -2.27
UBFD1O14562 AC109446.1-201ENST00000566172 220 ntBASIC0.9□□□□□ -2.27
UBFD1O14562 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.9□□□□□ -2.27
UBFD1O14562 AC008752.3-201ENST00000588113 712 ntBASIC0.9□□□□□ -2.27
UBFD1O14562 AL451064.1-201ENST00000607718 471 ntBASIC0.9□□□□□ -2.27
UBFD1O14562 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
UBFD1O14562 AC009159.2-201ENST00000617603 606 ntBASIC0.9□□□□□ -2.27
UBFD1O14562 AC009878.1-201ENST00000621819 340 ntBASIC0.9□□□□□ -2.27
UBFD1O14562 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
UBFD1O14562 AC100821.1-201ENST00000523153 2479 ntBASIC0.89□□□□□ -2.27
UBFD1O14562 RNU6-428P-201ENST00000362942 107 ntBASIC0.89□□□□□ -2.27
UBFD1O14562 RNU6-414P-201ENST00000363705 104 ntBASIC0.89□□□□□ -2.27
UBFD1O14562 RNU6-169P-201ENST00000365336 107 ntBASIC0.89□□□□□ -2.27
UBFD1O14562 RNU6-43P-201ENST00000384302 107 ntBASIC0.89□□□□□ -2.27
UBFD1O14562 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.89□□□□□ -2.27
UBFD1O14562 AC245047.4-201ENST00000433189 144 ntBASIC0.89□□□□□ -2.27
UBFD1O14562 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.89□□□□□ -2.27
UBFD1O14562 JTBP1-201ENST00000441314 247 ntBASIC0.89□□□□□ -2.27
UBFD1O14562 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.89□□□□□ -2.27
UBFD1O14562 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.89□□□□□ -2.27
UBFD1O14562 OR2AQ1P-201ENST00000451972 200 ntBASIC0.89□□□□□ -2.27
UBFD1O14562 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
UBFD1O14562 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.89□□□□□ -2.27
UBFD1O14562 ARL2BPP4-201ENST00000506854 471 ntBASIC0.89□□□□□ -2.27
UBFD1O14562 SNORA3.4-201ENST00000515969 96 ntBASIC0.89□□□□□ -2.27
UBFD1O14562 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
UBFD1O14562 ZNF321P-202ENST00000550843 495 ntBASIC0.89□□□□□ -2.27
UBFD1O14562 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.89□□□□□ -2.27
UBFD1O14562 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.89□□□□□ -2.27
UBFD1O14562 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.89□□□□□ -2.27
UBFD1O14562 PCMTD1P2-201ENST00000565017 355 ntBASIC0.89□□□□□ -2.27
UBFD1O14562 AC005771.1-201ENST00000585581 349 ntBASIC0.89□□□□□ -2.27
UBFD1O14562 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.89□□□□□ -2.27
UBFD1O14562 AC012507.3-201ENST00000603556 477 ntBASIC0.89□□□□□ -2.27
UBFD1O14562 AC090578.1-201ENST00000604955 591 ntBASIC0.89□□□□□ -2.27
UBFD1O14562 AC211469.2-201ENST00000605461 205 ntBASIC0.89□□□□□ -2.27
UBFD1O14562 AC123912.5-201ENST00000605470 343 ntBASIC0.89□□□□□ -2.27
UBFD1O14562 AL391834.2-201ENST00000609982 546 ntBASIC0.89□□□□□ -2.27
UBFD1O14562 AC136475.10-201ENST00000620253 385 ntBASIC0.89□□□□□ -2.27
UBFD1O14562 ICE2P2-201ENST00000483823 2787 ntBASIC0.89□□□□□ -2.27
UBFD1O14562 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
UBFD1O14562 RNU6-179P-201ENST00000363350 107 ntBASIC0.88□□□□□ -2.27
UBFD1O14562 SNORA25.8-201ENST00000364831 128 ntBASIC0.88□□□□□ -2.27
UBFD1O14562 RNU6-45P-201ENST00000384471 107 ntBASIC0.88□□□□□ -2.27
UBFD1O14562 RPL23AP32-201ENST00000395315 459 ntBASIC0.88□□□□□ -2.27
UBFD1O14562 RPL37P10-201ENST00000412884 288 ntBASIC0.88□□□□□ -2.27
UBFD1O14562 MTCO3P41-201ENST00000414801 328 ntBASIC0.88□□□□□ -2.27
UBFD1O14562 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.88□□□□□ -2.27
UBFD1O14562 AL590135.1-201ENST00000422215 156 ntBASIC0.88□□□□□ -2.27
UBFD1O14562 AL354692.1-201ENST00000423044 315 ntBASIC0.88□□□□□ -2.27
UBFD1O14562 AC019205.3-201ENST00000424573 156 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms