Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RNA5SP129-201ENST00000410276 118 ntBASIC4.02□□□□□ -1.77
SOX1O00570 AC009963.1-201ENST00000417265 157 ntBASIC4.02□□□□□ -1.77
SOX1O00570 RPS27AP9-201ENST00000477681 438 ntBASIC4.02□□□□□ -1.77
SOX1O00570 DEFB117-201ENST00000602356 141 ntBASIC4.02□□□□□ -1.77
SOX1O00570 TEX41-243ENST00000614173 190 ntTSL 5 BASIC4.02□□□□□ -1.77
SOX1O00570 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SOX1O00570 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SOX1O00570 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.02□□□□□ -1.77
SOX1O00570 Y_RNA.75-201ENST00000362927 97 ntBASIC4.01□□□□□ -1.77
SOX1O00570 Y_RNA.81-201ENST00000362997 102 ntBASIC4.01□□□□□ -1.77
SOX1O00570 RNU4-84P-201ENST00000364200 139 ntBASIC4.01□□□□□ -1.77
SOX1O00570 RNU2-2P-201ENST00000410396 191 ntBASIC4.01□□□□□ -1.77
SOX1O00570 BPY2DP-201ENST00000422208 265 ntBASIC4.01□□□□□ -1.77
SOX1O00570 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.01□□□□□ -1.77
SOX1O00570 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.01□□□□□ -1.77
SOX1O00570 AC091179.3-201ENST00000474761 144 ntBASIC4.01□□□□□ -1.77
SOX1O00570 AC090525.1-201ENST00000479116 478 ntBASIC4.01□□□□□ -1.77
SOX1O00570 RPS29P20-201ENST00000489592 171 ntBASIC4.01□□□□□ -1.77
SOX1O00570 CYP4A27P-201ENST00000567218 190 ntBASIC4.01□□□□□ -1.77
SOX1O00570 MIR5680-201ENST00000577577 84 ntBASIC4.01□□□□□ -1.77
SOX1O00570 RNU2-4P-201ENST00000606190 192 ntBASIC4.01□□□□□ -1.77
SOX1O00570 U2.15-201ENST00000611544 191 ntBASIC4.01□□□□□ -1.77
SOX1O00570 U2.16-201ENST00000613119 191 ntBASIC4.01□□□□□ -1.77
SOX1O00570 U2.12-201ENST00000613778 191 ntBASIC4.01□□□□□ -1.77
SOX1O00570 U2.9-201ENST00000615427 191 ntBASIC4.01□□□□□ -1.77
SOX1O00570 U2.11-201ENST00000616345 191 ntBASIC4.01□□□□□ -1.77
SOX1O00570 U2.2-201ENST00000616535 191 ntBASIC4.01□□□□□ -1.77
SOX1O00570 U2.3-201ENST00000617785 191 ntBASIC4.01□□□□□ -1.77
SOX1O00570 U2.19-201ENST00000618602 191 ntBASIC4.01□□□□□ -1.77
SOX1O00570 RNU2-1-201ENST00000618664 191 ntBASIC4.01□□□□□ -1.77
SOX1O00570 U2.6-201ENST00000619225 191 ntBASIC4.01□□□□□ -1.77
SOX1O00570 U2.5-201ENST00000619465 191 ntBASIC4.01□□□□□ -1.77
SOX1O00570 U2.10-201ENST00000620268 191 ntBASIC4.01□□□□□ -1.77
SOX1O00570 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.01□□□□□ -1.77
SOX1O00570 MIR3674-201ENST00000636576 68 ntBASIC4.01□□□□□ -1.77
SOX1O00570 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.01□□□□□ -1.77
SOX1O00570 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SOX1O00570 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
SOX1O00570 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SOX1O00570 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SOX1O00570 AC007656.2-201ENST00000624902 4547 ntBASIC4□□□□□ -1.77
SOX1O00570 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4□□□□□ -1.77
SOX1O00570 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SOX1O00570 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SOX1O00570 RNU6-799P-201ENST00000363567 107 ntBASIC4□□□□□ -1.77
SOX1O00570 Y_RNA.215-201ENST00000364204 112 ntBASIC4□□□□□ -1.77
SOX1O00570 AL357075.1-201ENST00000404107 726 ntBASIC4□□□□□ -1.77
SOX1O00570 RN7SKP53-201ENST00000411337 315 ntBASIC4□□□□□ -1.77
SOX1O00570 RPL27AP5-201ENST00000469428 449 ntBASIC4□□□□□ -1.77
SOX1O00570 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4□□□□□ -1.77
SOX1O00570 SNORA31.16-201ENST00000516773 139 ntBASIC4□□□□□ -1.77
SOX1O00570 ACA59.2-201ENST00000517061 156 ntBASIC4□□□□□ -1.77
SOX1O00570 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4□□□□□ -1.77
SOX1O00570 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4□□□□□ -1.77
SOX1O00570 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4□□□□□ -1.77
SOX1O00570 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4□□□□□ -1.77
SOX1O00570 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4□□□□□ -1.77
SOX1O00570 AC009127.3-201ENST00000570531 403 ntBASIC4□□□□□ -1.77
SOX1O00570 AC006380.1-201ENST00000603598 186 ntBASIC4□□□□□ -1.77
SOX1O00570 SNRPGP20-201ENST00000604477 205 ntBASIC4□□□□□ -1.77
SOX1O00570 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SOX1O00570 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4□□□□□ -1.77
SOX1O00570 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4□□□□□ -1.77
SOX1O00570 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SOX1O00570 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4□□□□□ -1.77
SOX1O00570 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
SOX1O00570 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SOX1O00570 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4□□□□□ -1.77
SOX1O00570 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
SOX1O00570 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.99□□□□□ -1.77
SOX1O00570 Y_RNA.182-201ENST00000363880 111 ntBASIC3.99□□□□□ -1.77
SOX1O00570 RNU4-17P-201ENST00000365598 141 ntBASIC3.99□□□□□ -1.77
SOX1O00570 Y_RNA.412-201ENST00000384001 104 ntBASIC3.99□□□□□ -1.77
SOX1O00570 HDGFP1-201ENST00000405943 252 ntBASIC3.99□□□□□ -1.77
SOX1O00570 RNU6-735P-201ENST00000410612 107 ntBASIC3.99□□□□□ -1.77
SOX1O00570 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.99□□□□□ -1.77
SOX1O00570 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.99□□□□□ -1.77
SOX1O00570 AP000873.1-201ENST00000463987 400 ntBASIC3.99□□□□□ -1.77
SOX1O00570 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.99□□□□□ -1.77
SOX1O00570 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.99□□□□□ -1.77
SOX1O00570 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.99□□□□□ -1.77
SOX1O00570 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.99□□□□□ -1.77
SOX1O00570 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.99□□□□□ -1.77
SOX1O00570 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.99□□□□□ -1.77
SOX1O00570 MIR3684-201ENST00000579779 74 ntBASIC3.99□□□□□ -1.77
SOX1O00570 MIR3136-201ENST00000583498 78 ntBASIC3.99□□□□□ -1.77
SOX1O00570 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.99□□□□□ -1.77
SOX1O00570 AC002543.1-201ENST00000299783 1954 ntBASIC3.99□□□□□ -1.77
SOX1O00570 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SOX1O00570 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SOX1O00570 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SOX1O00570 AC068254.2-201ENST00000623938 3577 ntBASIC3.99□□□□□ -1.77
SOX1O00570 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
SOX1O00570 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.99□□□□□ -1.77
SOX1O00570 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SOX1O00570 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.98□□□□□ -1.77
SOX1O00570 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
SOX1O00570 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SOX1O00570 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SOX1O00570 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms