Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AL031274.1-201ENST00000450334 232 ntBASIC2.17□□□□□ -2.06
RTCAO00442 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.17□□□□□ -2.06
RTCAO00442 UBE2DNL-203ENST00000474922 222 ntBASIC2.17□□□□□ -2.06
RTCAO00442 AC090255.1-201ENST00000495779 349 ntBASIC2.17□□□□□ -2.06
RTCAO00442 RNA5SP24-201ENST00000516478 95 ntBASIC2.17□□□□□ -2.06
RTCAO00442 RNU6-256P-201ENST00000516747 97 ntBASIC2.17□□□□□ -2.06
RTCAO00442 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.17□□□□□ -2.06
RTCAO00442 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.17□□□□□ -2.06
RTCAO00442 AC025423.5-201ENST00000550230 219 ntBASIC2.17□□□□□ -2.06
RTCAO00442 AC103996.1-201ENST00000555468 102 ntBASIC2.17□□□□□ -2.06
RTCAO00442 MIR4299-201ENST00000577899 72 ntBASIC2.17□□□□□ -2.06
RTCAO00442 MIR5007-201ENST00000583098 95 ntBASIC2.17□□□□□ -2.06
RTCAO00442 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.17□□□□□ -2.06
RTCAO00442 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.17□□□□□ -2.06
RTCAO00442 MIR6766-201ENST00000622641 72 ntBASIC2.17□□□□□ -2.06
RTCAO00442 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
RTCAO00442 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
RTCAO00442 AC009487.4-201ENST00000624969 3585 ntBASIC2.16□□□□□ -2.06
RTCAO00442 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
RTCAO00442 MTND4P23-201ENST00000447723 1363 ntBASIC2.16□□□□□ -2.06
RTCAO00442 MIR23A-201ENST00000385245 73 ntBASIC2.16□□□□□ -2.06
RTCAO00442 SNORA26.3-201ENST00000391119 136 ntBASIC2.16□□□□□ -2.06
RTCAO00442 RNA5SP212-201ENST00000391223 107 ntBASIC2.16□□□□□ -2.06
RTCAO00442 AL356432.1-201ENST00000405809 419 ntBASIC2.16□□□□□ -2.06
RTCAO00442 RNU2-32P-201ENST00000411193 191 ntBASIC2.16□□□□□ -2.06
RTCAO00442 RNU6-293P-201ENST00000411259 106 ntBASIC2.16□□□□□ -2.06
RTCAO00442 MTCO3P46-201ENST00000425787 232 ntBASIC2.16□□□□□ -2.06
RTCAO00442 AC078809.1-201ENST00000427601 140 ntBASIC2.16□□□□□ -2.06
RTCAO00442 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.16□□□□□ -2.06
RTCAO00442 RPL32P28-201ENST00000443577 397 ntBASIC2.16□□□□□ -2.06
RTCAO00442 RPL39P29-201ENST00000447779 157 ntBASIC2.16□□□□□ -2.06
RTCAO00442 RPL30P1-201ENST00000488676 339 ntBASIC2.16□□□□□ -2.06
RTCAO00442 AC079804.2-201ENST00000490376 200 ntBASIC2.16□□□□□ -2.06
RTCAO00442 AC022447.4-201ENST00000504053 364 ntBASIC2.16□□□□□ -2.06
RTCAO00442 AK3P2-201ENST00000507976 429 ntBASIC2.16□□□□□ -2.06
RTCAO00442 AC107222.1-201ENST00000510899 637 ntBASIC2.16□□□□□ -2.06
RTCAO00442 AC092436.3-201ENST00000511788 257 ntBASIC2.16□□□□□ -2.06
RTCAO00442 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.16□□□□□ -2.06
RTCAO00442 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.16□□□□□ -2.06
RTCAO00442 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.16□□□□□ -2.06
RTCAO00442 AC022616.8-201ENST00000533569 253 ntBASIC2.16□□□□□ -2.06
RTCAO00442 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.16□□□□□ -2.06
RTCAO00442 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.16□□□□□ -2.06
RTCAO00442 CPDP1-201ENST00000579660 283 ntBASIC2.16□□□□□ -2.06
RTCAO00442 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.16□□□□□ -2.06
RTCAO00442 AP001836.1-201ENST00000604675 523 ntBASIC2.16□□□□□ -2.06
RTCAO00442 BNIP3P10-201ENST00000605360 577 ntBASIC2.16□□□□□ -2.06
RTCAO00442 AC064836.2-201ENST00000609491 462 ntBASIC2.16□□□□□ -2.06
RTCAO00442 AC241585.2-209ENST00000638217 143 ntBASIC2.16□□□□□ -2.06
RTCAO00442 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RTCAO00442 Y_RNA.40-201ENST00000362645 93 ntBASIC2.15□□□□□ -2.07
RTCAO00442 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
RTCAO00442 RNU4-52P-201ENST00000384209 138 ntBASIC2.15□□□□□ -2.07
RTCAO00442 RNU6-692P-201ENST00000384496 107 ntBASIC2.15□□□□□ -2.07
RTCAO00442 RNU6-831P-201ENST00000384548 107 ntBASIC2.15□□□□□ -2.07
RTCAO00442 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
RTCAO00442 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
RTCAO00442 RNU6-1140P-201ENST00000410517 106 ntBASIC2.15□□□□□ -2.07
RTCAO00442 RNU2-48P-201ENST00000410694 191 ntBASIC2.15□□□□□ -2.07
RTCAO00442 SRIP3-201ENST00000413200 219 ntBASIC2.15□□□□□ -2.07
RTCAO00442 AC244636.1-201ENST00000421152 228 ntBASIC2.15□□□□□ -2.07
RTCAO00442 AL133396.1-201ENST00000432048 687 ntBASIC2.15□□□□□ -2.07
RTCAO00442 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.15□□□□□ -2.07
RTCAO00442 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.15□□□□□ -2.07
RTCAO00442 AC008628.2-201ENST00000502605 298 ntBASIC2.15□□□□□ -2.07
RTCAO00442 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.15□□□□□ -2.07
RTCAO00442 AC016256.1-201ENST00000547971 354 ntBASIC2.15□□□□□ -2.07
RTCAO00442 AC026371.1-201ENST00000551867 419 ntBASIC2.15□□□□□ -2.07
RTCAO00442 TRAV32-201ENST00000553993 340 ntBASIC2.15□□□□□ -2.07
RTCAO00442 MIR3672-201ENST00000584290 82 ntBASIC2.15□□□□□ -2.07
RTCAO00442 AL136221.1-201ENST00000621449 509 ntBASIC2.15□□□□□ -2.07
RTCAO00442 DUXAP9-208ENST00000622815 614 ntBASIC2.15□□□□□ -2.07
RTCAO00442 AC009033.1-201ENST00000624279 431 ntBASIC2.15□□□□□ -2.07
RTCAO00442 AC090517.3-201ENST00000625170 141 ntBASIC2.15□□□□□ -2.07
RTCAO00442 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.07
RTCAO00442 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
RTCAO00442 RNU6-1283P-201ENST00000365314 105 ntBASIC2.14□□□□□ -2.07
RTCAO00442 RNU6-1013P-201ENST00000384180 107 ntBASIC2.14□□□□□ -2.07
RTCAO00442 RNU6-43P-201ENST00000384302 107 ntBASIC2.14□□□□□ -2.07
RTCAO00442 RNU6-1274P-201ENST00000384557 107 ntBASIC2.14□□□□□ -2.07
RTCAO00442 MIR221-201ENST00000385135 110 ntBASIC2.14□□□□□ -2.07
RTCAO00442 RNU6-510P-201ENST00000391239 108 ntBASIC2.14□□□□□ -2.07
RTCAO00442 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.14□□□□□ -2.07
RTCAO00442 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.14□□□□□ -2.07
RTCAO00442 RPL31P58-201ENST00000469001 379 ntBASIC2.14□□□□□ -2.07
RTCAO00442 AC114801.2-201ENST00000503825 781 ntBASIC2.14□□□□□ -2.07
RTCAO00442 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.14□□□□□ -2.07
RTCAO00442 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.14□□□□□ -2.07
RTCAO00442 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.14□□□□□ -2.07
RTCAO00442 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.14□□□□□ -2.07
RTCAO00442 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.14□□□□□ -2.07
RTCAO00442 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.14□□□□□ -2.07
RTCAO00442 AL022345.1-201ENST00000607292 135 ntBASIC2.14□□□□□ -2.07
RTCAO00442 AL132822.1-201ENST00000617063 513 ntBASIC2.14□□□□□ -2.07
RTCAO00442 U1.36-201ENST00000620684 176 ntBASIC2.14□□□□□ -2.07
RTCAO00442 AC100810.6-201ENST00000638068 285 ntBASIC2.14□□□□□ -2.07
RTCAO00442 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
RTCAO00442 RNA5SP276-201ENST00000362580 94 ntBASIC2.13□□□□□ -2.07
RTCAO00442 Y_RNA.279-201ENST00000364763 95 ntBASIC2.13□□□□□ -2.07
RTCAO00442 SNORA51.11-201ENST00000384442 131 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms