Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RNU6-743P-201ENST00000364151 106 ntBASIC1.87□□□□□ -2.11
PDLIM1O00151 RNU4-56P-201ENST00000364700 142 ntBASIC1.87□□□□□ -2.11
PDLIM1O00151 Y_RNA.373-201ENST00000365600 103 ntBASIC1.87□□□□□ -2.11
PDLIM1O00151 SNORA64-201ENST00000384674 134 ntBASIC1.87□□□□□ -2.11
PDLIM1O00151 EIF4E2P1-201ENST00000393781 255 ntBASIC1.87□□□□□ -2.11
PDLIM1O00151 AL079342.1-201ENST00000401460 267 ntBASIC1.87□□□□□ -2.11
PDLIM1O00151 AL023284.1-201ENST00000403956 276 ntBASIC1.87□□□□□ -2.11
PDLIM1O00151 SNORA11.4-201ENST00000408823 129 ntBASIC1.87□□□□□ -2.11
PDLIM1O00151 AL139156.1-201ENST00000412785 841 ntBASIC1.87□□□□□ -2.11
PDLIM1O00151 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.87□□□□□ -2.11
PDLIM1O00151 MTCO1P20-201ENST00000425366 358 ntBASIC1.87□□□□□ -2.11
PDLIM1O00151 SNAP23P1-201ENST00000433229 246 ntBASIC1.87□□□□□ -2.11
PDLIM1O00151 ERLEC1P1-201ENST00000433806 578 ntBASIC1.87□□□□□ -2.11
PDLIM1O00151 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.87□□□□□ -2.11
PDLIM1O00151 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.87□□□□□ -2.11
PDLIM1O00151 AC083904.1-201ENST00000487828 231 ntBASIC1.87□□□□□ -2.11
PDLIM1O00151 RNU6-720P-201ENST00000516363 108 ntBASIC1.87□□□□□ -2.11
PDLIM1O00151 AC104576.1-201ENST00000524225 88 ntBASIC1.87□□□□□ -2.11
PDLIM1O00151 MIR3136-201ENST00000583498 78 ntBASIC1.87□□□□□ -2.11
PDLIM1O00151 MIR5692C1-201ENST00000585309 91 ntBASIC1.87□□□□□ -2.11
PDLIM1O00151 AC005034.5-201ENST00000604219 466 ntBASIC1.87□□□□□ -2.11
PDLIM1O00151 AP001836.1-201ENST00000604675 523 ntBASIC1.87□□□□□ -2.11
PDLIM1O00151 AL034555.1-201ENST00000604816 211 ntBASIC1.87□□□□□ -2.11
PDLIM1O00151 RNU6-89P-201ENST00000606519 100 ntBASIC1.87□□□□□ -2.11
PDLIM1O00151 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.87□□□□□ -2.11
PDLIM1O00151 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.87□□□□□ -2.11
PDLIM1O00151 MIR219B-201ENST00000637023 88 ntBASIC1.87□□□□□ -2.11
PDLIM1O00151 AC068137.3-201ENST00000639191 341 ntBASIC1.87□□□□□ -2.11
PDLIM1O00151 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
PDLIM1O00151 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
PDLIM1O00151 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.86□□□□□ -2.11
PDLIM1O00151 Y_RNA.38-201ENST00000362617 102 ntBASIC1.86□□□□□ -2.11
PDLIM1O00151 SNORD32A-201ENST00000364805 84 ntBASIC1.86□□□□□ -2.11
PDLIM1O00151 Y_RNA.504-201ENST00000384481 104 ntBASIC1.86□□□□□ -2.11
PDLIM1O00151 MIR181A1-201ENST00000385026 110 ntBASIC1.86□□□□□ -2.11
PDLIM1O00151 OOSP1P1-201ENST00000423265 274 ntBASIC1.86□□□□□ -2.11
PDLIM1O00151 AC078809.1-201ENST00000427601 140 ntBASIC1.86□□□□□ -2.11
PDLIM1O00151 MRPS10P2-201ENST00000431226 381 ntBASIC1.86□□□□□ -2.11
PDLIM1O00151 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.86□□□□□ -2.11
PDLIM1O00151 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.86□□□□□ -2.11
PDLIM1O00151 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.86□□□□□ -2.11
PDLIM1O00151 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.86□□□□□ -2.11
PDLIM1O00151 AL137159.1-201ENST00000452808 512 ntBASIC1.86□□□□□ -2.11
PDLIM1O00151 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.86□□□□□ -2.11
PDLIM1O00151 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.86□□□□□ -2.11
PDLIM1O00151 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
PDLIM1O00151 RPL39P5-202ENST00000512505 151 ntBASIC1.86□□□□□ -2.11
PDLIM1O00151 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.86□□□□□ -2.11
PDLIM1O00151 AP005597.4-201ENST00000526762 229 ntBASIC1.86□□□□□ -2.11
PDLIM1O00151 AC022616.8-201ENST00000533569 253 ntBASIC1.86□□□□□ -2.11
PDLIM1O00151 AC016957.1-201ENST00000534895 309 ntBASIC1.86□□□□□ -2.11
PDLIM1O00151 NDUFA5P6-201ENST00000542110 379 ntBASIC1.86□□□□□ -2.11
PDLIM1O00151 AL157687.1-201ENST00000554853 619 ntBASIC1.86□□□□□ -2.11
PDLIM1O00151 HSBP1P1-201ENST00000555205 166 ntBASIC1.86□□□□□ -2.11
PDLIM1O00151 AC233702.2-202ENST00000562547 291 ntBASIC1.86□□□□□ -2.11
PDLIM1O00151 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.86□□□□□ -2.11
PDLIM1O00151 SNRPGP19-201ENST00000603826 189 ntBASIC1.86□□□□□ -2.11
PDLIM1O00151 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.86□□□□□ -2.11
PDLIM1O00151 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.86□□□□□ -2.11
PDLIM1O00151 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.86□□□□□ -2.11
PDLIM1O00151 FER-210ENST00000628534 558 ntTSL 5 BASIC1.86□□□□□ -2.11
PDLIM1O00151 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.86□□□□□ -2.11
PDLIM1O00151 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
PDLIM1O00151 ZNF702P-202ENST00000434269 1966 ntBASIC1.85□□□□□ -2.11
PDLIM1O00151 Y_RNA.3-201ENST00000362331 103 ntBASIC1.85□□□□□ -2.11
PDLIM1O00151 SNORD115-3-201ENST00000363100 82 ntBASIC1.85□□□□□ -2.11
PDLIM1O00151 RNU6-1090P-201ENST00000364065 94 ntBASIC1.85□□□□□ -2.11
PDLIM1O00151 RNU6-142P-201ENST00000384019 107 ntBASIC1.85□□□□□ -2.11
PDLIM1O00151 RNU6-214P-201ENST00000384130 107 ntBASIC1.85□□□□□ -2.11
PDLIM1O00151 SNORD116-4-201ENST00000384733 96 ntBASIC1.85□□□□□ -2.11
PDLIM1O00151 MIR514A2-201ENST00000385131 88 ntBASIC1.85□□□□□ -2.11
PDLIM1O00151 MIR514A3-201ENST00000385132 88 ntBASIC1.85□□□□□ -2.11
PDLIM1O00151 HMGN2P39-201ENST00000398005 273 ntBASIC1.85□□□□□ -2.11
PDLIM1O00151 MIR450B-201ENST00000401182 78 ntBASIC1.85□□□□□ -2.11
PDLIM1O00151 RNU6-908P-201ENST00000410160 94 ntBASIC1.85□□□□□ -2.11
PDLIM1O00151 RN7SKP32-201ENST00000410167 303 ntBASIC1.85□□□□□ -2.11
PDLIM1O00151 RNU4-26P-201ENST00000410270 107 ntBASIC1.85□□□□□ -2.11
PDLIM1O00151 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.85□□□□□ -2.11
PDLIM1O00151 CBX3P6-201ENST00000430257 527 ntBASIC1.85□□□□□ -2.11
PDLIM1O00151 AL359672.1-201ENST00000442302 409 ntBASIC1.85□□□□□ -2.11
PDLIM1O00151 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.85□□□□□ -2.11
PDLIM1O00151 RPL9P9-202ENST00000466501 579 ntBASIC1.85□□□□□ -2.11
PDLIM1O00151 AC145146.1-201ENST00000496370 254 ntBASIC1.85□□□□□ -2.11
PDLIM1O00151 AC016632.1-201ENST00000503994 196 ntBASIC1.85□□□□□ -2.11
PDLIM1O00151 HSPE1P18-201ENST00000517602 280 ntBASIC1.85□□□□□ -2.11
PDLIM1O00151 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.85□□□□□ -2.11
PDLIM1O00151 MTND1P35-201ENST00000526739 508 ntBASIC1.85□□□□□ -2.11
PDLIM1O00151 TRAV32-201ENST00000553993 340 ntBASIC1.85□□□□□ -2.11
PDLIM1O00151 MIR5089-201ENST00000580047 84 ntBASIC1.85□□□□□ -2.11
PDLIM1O00151 MIR4298-201ENST00000584380 73 ntBASIC1.85□□□□□ -2.11
PDLIM1O00151 AL109918.3-201ENST00000603072 338 ntBASIC1.85□□□□□ -2.11
PDLIM1O00151 SNRPGP17-201ENST00000603780 214 ntBASIC1.85□□□□□ -2.11
PDLIM1O00151 AC018889.1-201ENST00000605372 397 ntBASIC1.85□□□□□ -2.11
PDLIM1O00151 AC064836.2-201ENST00000609491 462 ntBASIC1.85□□□□□ -2.11
PDLIM1O00151 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
PDLIM1O00151 AP000560.1-201ENST00000624150 1937 ntBASIC1.85□□□□□ -2.11
PDLIM1O00151 ZNF355P-201ENST00000427301 3216 ntBASIC1.85□□□□□ -2.11
PDLIM1O00151 AC092268.1-201ENST00000342691 405 ntBASIC1.84□□□□□ -2.11
PDLIM1O00151 Y_RNA.9-201ENST00000362354 101 ntBASIC1.84□□□□□ -2.11
PDLIM1O00151 RNU4-15P-201ENST00000362613 141 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms