Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 HMGB3P17-201ENST00000504195 649 ntBASIC1.86□□□□□ -2.11
NPIPA2E9PIF3 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.86□□□□□ -2.11
NPIPA2E9PIF3 MIR449C-201ENST00000516047 92 ntBASIC1.86□□□□□ -2.11
NPIPA2E9PIF3 RNU6-1069P-201ENST00000516612 133 ntBASIC1.86□□□□□ -2.11
NPIPA2E9PIF3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.86□□□□□ -2.11
NPIPA2E9PIF3 AP005597.4-201ENST00000526762 229 ntBASIC1.86□□□□□ -2.11
NPIPA2E9PIF3 AC007375.1-201ENST00000554513 578 ntBASIC1.86□□□□□ -2.11
NPIPA2E9PIF3 HMGB1P33-201ENST00000563485 527 ntBASIC1.86□□□□□ -2.11
NPIPA2E9PIF3 MIR5002-201ENST00000584713 97 ntBASIC1.86□□□□□ -2.11
NPIPA2E9PIF3 MIR5692C1-201ENST00000585309 91 ntBASIC1.86□□□□□ -2.11
NPIPA2E9PIF3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.86□□□□□ -2.11
NPIPA2E9PIF3 AL109918.3-201ENST00000603072 338 ntBASIC1.86□□□□□ -2.11
NPIPA2E9PIF3 AL034555.1-201ENST00000604816 211 ntBASIC1.86□□□□□ -2.11
NPIPA2E9PIF3 AC012557.2-201ENST00000605919 418 ntBASIC1.86□□□□□ -2.11
NPIPA2E9PIF3 AC064836.2-201ENST00000609491 462 ntBASIC1.86□□□□□ -2.11
NPIPA2E9PIF3 AC068944.2-201ENST00000610373 403 ntBASIC1.86□□□□□ -2.11
NPIPA2E9PIF3 AC009318.2-201ENST00000610917 651 ntBASIC1.86□□□□□ -2.11
NPIPA2E9PIF3 AL359314.1-201ENST00000616913 261 ntBASIC1.86□□□□□ -2.11
NPIPA2E9PIF3 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
NPIPA2E9PIF3 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
NPIPA2E9PIF3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 OR4G1P-203ENST00000641984 1631 ntBASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 RNU6-623P-201ENST00000363143 105 ntBASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 Y_RNA.504-201ENST00000384481 104 ntBASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 RNU6-1106P-201ENST00000390845 107 ntBASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 AC096920.1-201ENST00000423991 241 ntBASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 CBX3P6-201ENST00000430257 527 ntBASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 IFNA20P-201ENST00000436840 528 ntBASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 AL353689.1-201ENST00000438895 199 ntBASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 SEPT14P3-201ENST00000439401 183 ntBASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 MTCO2P3-201ENST00000442543 421 ntBASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 AL732372.2-207ENST00000445840 183 ntBASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 SEPT14P2-201ENST00000453405 183 ntBASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 RPL23AP3-201ENST00000453844 468 ntBASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 PRELID3BP1-201ENST00000457142 540 ntBASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 RNU6-1208P-201ENST00000459588 107 ntBASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 AC091885.1-201ENST00000506658 268 ntBASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 SEPT14P4-201ENST00000513445 186 ntBASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 SNORA19.2-201ENST00000516013 114 ntBASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 RNU2-44P-201ENST00000516795 194 ntBASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 RNU1-40P-201ENST00000516816 164 ntBASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 RNU1-97P-201ENST00000516872 164 ntBASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 AC087854.1-201ENST00000519706 414 ntBASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 FO082796.1-201ENST00000523795 183 ntBASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 ANP32BP3-201ENST00000559213 706 ntBASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 AC010525.2-201ENST00000590920 195 ntBASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 VN1R107P-201ENST00000601784 209 ntBASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 AL162413.1-201ENST00000603198 110 ntBASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 AC009314.1-201ENST00000603871 304 ntBASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 AC005034.5-201ENST00000604219 466 ntBASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 AP001836.1-201ENST00000604675 523 ntBASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 RNU6-89P-201ENST00000606519 100 ntBASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 MIR1248-201ENST00000629190 106 ntBASIC1.85□□□□□ -2.11
NPIPA2E9PIF3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
NPIPA2E9PIF3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
NPIPA2E9PIF3 RNA5SP276-201ENST00000362580 94 ntBASIC1.84□□□□□ -2.11
NPIPA2E9PIF3 Y_RNA.38-201ENST00000362617 102 ntBASIC1.84□□□□□ -2.11
NPIPA2E9PIF3 RNU6-1090P-201ENST00000364065 94 ntBASIC1.84□□□□□ -2.11
NPIPA2E9PIF3 Y_RNA.373-201ENST00000365600 103 ntBASIC1.84□□□□□ -2.11
NPIPA2E9PIF3 SNORA36A-201ENST00000384221 132 ntBASIC1.84□□□□□ -2.11
NPIPA2E9PIF3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
NPIPA2E9PIF3 MIR1262-201ENST00000408276 93 ntBASIC1.84□□□□□ -2.11
NPIPA2E9PIF3 SRIP3-201ENST00000413200 219 ntBASIC1.84□□□□□ -2.11
NPIPA2E9PIF3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.84□□□□□ -2.11
NPIPA2E9PIF3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.84□□□□□ -2.11
NPIPA2E9PIF3 AC025033.1-201ENST00000463883 194 ntBASIC1.84□□□□□ -2.11
NPIPA2E9PIF3 AC022447.4-201ENST00000504053 364 ntBASIC1.84□□□□□ -2.11
NPIPA2E9PIF3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.84□□□□□ -2.11
NPIPA2E9PIF3 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.84□□□□□ -2.11
NPIPA2E9PIF3 RNU6-548P-201ENST00000517083 115 ntBASIC1.84□□□□□ -2.11
NPIPA2E9PIF3 TRAV32-201ENST00000553993 340 ntBASIC1.84□□□□□ -2.11
NPIPA2E9PIF3 AC018889.1-201ENST00000605372 397 ntBASIC1.84□□□□□ -2.11
NPIPA2E9PIF3 Y_RNA.167-201ENST00000363735 109 ntBASIC1.83□□□□□ -2.12
NPIPA2E9PIF3 Y_RNA.231-201ENST00000364358 102 ntBASIC1.83□□□□□ -2.12
NPIPA2E9PIF3 RNU6-142P-201ENST00000384019 107 ntBASIC1.83□□□□□ -2.12
NPIPA2E9PIF3 MIR514A2-201ENST00000385131 88 ntBASIC1.83□□□□□ -2.12
NPIPA2E9PIF3 MIR514A3-201ENST00000385132 88 ntBASIC1.83□□□□□ -2.12
NPIPA2E9PIF3 RNA5SP465-201ENST00000391195 109 ntBASIC1.83□□□□□ -2.12
NPIPA2E9PIF3 BTF3L4P2-201ENST00000392798 346 ntBASIC1.83□□□□□ -2.12
NPIPA2E9PIF3 AC019129.1-201ENST00000403786 261 ntBASIC1.83□□□□□ -2.12
NPIPA2E9PIF3 RNU6-908P-201ENST00000410160 94 ntBASIC1.83□□□□□ -2.12
NPIPA2E9PIF3 AL158823.1-201ENST00000418441 478 ntBASIC1.83□□□□□ -2.12
NPIPA2E9PIF3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.83□□□□□ -2.12
NPIPA2E9PIF3 AC027124.2-201ENST00000428249 105 ntBASIC1.83□□□□□ -2.12
NPIPA2E9PIF3 C8orf59P1-201ENST00000429930 303 ntBASIC1.83□□□□□ -2.12
NPIPA2E9PIF3 MRPS10P2-201ENST00000431226 381 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms