Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.79□□□□□ -2.12
TRIM49D1C9J1S8 RPL30P4-201ENST00000429309 333 ntBASIC1.79□□□□□ -2.12
TRIM49D1C9J1S8 AC003989.2-201ENST00000440224 169 ntBASIC1.79□□□□□ -2.12
TRIM49D1C9J1S8 MTND1P11-201ENST00000456661 876 ntBASIC1.79□□□□□ -2.12
TRIM49D1C9J1S8 snoU13.26-201ENST00000459452 105 ntBASIC1.79□□□□□ -2.12
TRIM49D1C9J1S8 SNRPGP7-201ENST00000469016 106 ntBASIC1.79□□□□□ -2.12
TRIM49D1C9J1S8 AC025465.4-201ENST00000513422 638 ntBASIC1.79□□□□□ -2.12
TRIM49D1C9J1S8 RNU7-193P-201ENST00000516723 65 ntBASIC1.79□□□□□ -2.12
TRIM49D1C9J1S8 AP004607.1-201ENST00000524456 203 ntBASIC1.79□□□□□ -2.12
TRIM49D1C9J1S8 AF235103.2-201ENST00000525753 346 ntBASIC1.79□□□□□ -2.12
TRIM49D1C9J1S8 COPS8P3-201ENST00000526024 482 ntBASIC1.79□□□□□ -2.12
TRIM49D1C9J1S8 AC010186.2-204ENST00000537668 439 ntBASIC1.79□□□□□ -2.12
TRIM49D1C9J1S8 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.79□□□□□ -2.12
TRIM49D1C9J1S8 MIR4742-201ENST00000581069 85 ntBASIC1.79□□□□□ -2.12
TRIM49D1C9J1S8 AC018638.8-201ENST00000588755 281 ntBASIC1.79□□□□□ -2.12
TRIM49D1C9J1S8 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.79□□□□□ -2.12
TRIM49D1C9J1S8 MIR7157-201ENST00000635801 60 ntBASIC1.79□□□□□ -2.12
TRIM49D1C9J1S8 AC241585.2-209ENST00000638217 143 ntBASIC1.79□□□□□ -2.12
TRIM49D1C9J1S8 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.78□□□□□ -2.12
TRIM49D1C9J1S8 RNU6-1317P-201ENST00000364582 104 ntBASIC1.78□□□□□ -2.12
TRIM49D1C9J1S8 RNU6-622P-201ENST00000384272 103 ntBASIC1.78□□□□□ -2.12
TRIM49D1C9J1S8 RNU6-95P-201ENST00000384697 107 ntBASIC1.78□□□□□ -2.12
TRIM49D1C9J1S8 MIR17-201ENST00000385012 84 ntBASIC1.78□□□□□ -2.12
TRIM49D1C9J1S8 MIR147B-201ENST00000390185 80 ntBASIC1.78□□□□□ -2.12
TRIM49D1C9J1S8 EIF4E2P1-201ENST00000393781 255 ntBASIC1.78□□□□□ -2.12
TRIM49D1C9J1S8 RNU6-293P-201ENST00000411259 106 ntBASIC1.78□□□□□ -2.12
TRIM49D1C9J1S8 VN1R36P-201ENST00000414936 291 ntBASIC1.78□□□□□ -2.12
TRIM49D1C9J1S8 AC096649.2-201ENST00000416186 393 ntBASIC1.78□□□□□ -2.12
TRIM49D1C9J1S8 CYCSP48-201ENST00000417124 323 ntBASIC1.78□□□□□ -2.12
TRIM49D1C9J1S8 AC008267.5-201ENST00000424928 265 ntBASIC1.78□□□□□ -2.12
TRIM49D1C9J1S8 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.78□□□□□ -2.12
TRIM49D1C9J1S8 AC243964.1-201ENST00000441814 261 ntBASIC1.78□□□□□ -2.12
TRIM49D1C9J1S8 AC007969.2-201ENST00000441891 191 ntBASIC1.78□□□□□ -2.12
TRIM49D1C9J1S8 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.78□□□□□ -2.12
TRIM49D1C9J1S8 RPS29P11-201ENST00000496507 171 ntBASIC1.78□□□□□ -2.12
TRIM49D1C9J1S8 HMGN1P12-201ENST00000499125 195 ntBASIC1.78□□□□□ -2.12
TRIM49D1C9J1S8 RNU6-256P-201ENST00000516747 97 ntBASIC1.78□□□□□ -2.12
TRIM49D1C9J1S8 AP005639.2-201ENST00000527592 928 ntBASIC1.78□□□□□ -2.12
TRIM49D1C9J1S8 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.78□□□□□ -2.12
TRIM49D1C9J1S8 AC007375.1-201ENST00000554513 578 ntBASIC1.78□□□□□ -2.12
TRIM49D1C9J1S8 PSMA3P-201ENST00000555485 635 ntBASIC1.78□□□□□ -2.12
TRIM49D1C9J1S8 MIR3122-201ENST00000577243 73 ntBASIC1.78□□□□□ -2.12
TRIM49D1C9J1S8 MIR3618-201ENST00000580330 88 ntBASIC1.78□□□□□ -2.12
TRIM49D1C9J1S8 MIR3199-1-201ENST00000582434 88 ntBASIC1.78□□□□□ -2.12
TRIM49D1C9J1S8 AC008749.1-201ENST00000597650 306 ntBASIC1.78□□□□□ -2.12
TRIM49D1C9J1S8 BNIP3P10-201ENST00000605360 577 ntBASIC1.78□□□□□ -2.12
TRIM49D1C9J1S8 AL161423.1-201ENST00000613700 262 ntBASIC1.78□□□□□ -2.12
TRIM49D1C9J1S8 AL138726.1-201ENST00000614873 333 ntBASIC1.78□□□□□ -2.12
TRIM49D1C9J1S8 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.78□□□□□ -2.12
TRIM49D1C9J1S8 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.78□□□□□ -2.12
TRIM49D1C9J1S8 ZNF355P-201ENST00000427301 3216 ntBASIC1.78□□□□□ -2.12
TRIM49D1C9J1S8 AC092881.1-201ENST00000638218 2733 ntBASIC1.77□□□□□ -2.13
TRIM49D1C9J1S8 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
TRIM49D1C9J1S8 SNORD114-1-201ENST00000362705 72 ntBASIC1.77□□□□□ -2.13
TRIM49D1C9J1S8 Y_RNA.135-201ENST00000363439 95 ntBASIC1.77□□□□□ -2.13
TRIM49D1C9J1S8 Y_RNA.151-201ENST00000363566 112 ntBASIC1.77□□□□□ -2.13
TRIM49D1C9J1S8 Y_RNA.279-201ENST00000364763 95 ntBASIC1.77□□□□□ -2.13
TRIM49D1C9J1S8 U3.13-201ENST00000364804 214 ntBASIC1.77□□□□□ -2.13
TRIM49D1C9J1S8 Y_RNA.301-201ENST00000364990 103 ntBASIC1.77□□□□□ -2.13
TRIM49D1C9J1S8 MIR487A-201ENST00000385009 80 ntBASIC1.77□□□□□ -2.13
TRIM49D1C9J1S8 SNORA46.1-201ENST00000391069 153 ntBASIC1.77□□□□□ -2.13
TRIM49D1C9J1S8 AC074117.2-201ENST00000417130 397 ntBASIC1.77□□□□□ -2.13
TRIM49D1C9J1S8 AL445685.2-201ENST00000422551 342 ntBASIC1.77□□□□□ -2.13
TRIM49D1C9J1S8 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.77□□□□□ -2.13
TRIM49D1C9J1S8 Z82205.1-201ENST00000428456 297 ntBASIC1.77□□□□□ -2.13
TRIM49D1C9J1S8 MTND3P9-201ENST00000429526 346 ntBASIC1.77□□□□□ -2.13
TRIM49D1C9J1S8 RNU7-138P-201ENST00000459479 64 ntBASIC1.77□□□□□ -2.13
TRIM49D1C9J1S8 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.77□□□□□ -2.13
TRIM49D1C9J1S8 AC007547.1-201ENST00000462177 490 ntBASIC1.77□□□□□ -2.13
TRIM49D1C9J1S8 AC103851.1-201ENST00000506833 274 ntBASIC1.77□□□□□ -2.13
TRIM49D1C9J1S8 AC107393.1-201ENST00000512403 346 ntBASIC1.77□□□□□ -2.13
TRIM49D1C9J1S8 RNU6-864P-201ENST00000516256 108 ntBASIC1.77□□□□□ -2.13
TRIM49D1C9J1S8 SNORA20.3-201ENST00000516880 132 ntBASIC1.77□□□□□ -2.13
TRIM49D1C9J1S8 HSPE1P18-201ENST00000517602 280 ntBASIC1.77□□□□□ -2.13
TRIM49D1C9J1S8 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.77□□□□□ -2.13
TRIM49D1C9J1S8 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.77□□□□□ -2.13
TRIM49D1C9J1S8 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.77□□□□□ -2.13
TRIM49D1C9J1S8 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.77□□□□□ -2.13
TRIM49D1C9J1S8 MIR3976-201ENST00000606807 139 ntBASIC1.77□□□□□ -2.13
TRIM49D1C9J1S8 AL162373.1-201ENST00000620433 407 ntBASIC1.77□□□□□ -2.13
TRIM49D1C9J1S8 AC009033.1-201ENST00000624279 431 ntBASIC1.77□□□□□ -2.13
TRIM49D1C9J1S8 AC099654.14-201ENST00000638599 341 ntBASIC1.77□□□□□ -2.13
TRIM49D1C9J1S8 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 SNORD113-7-201ENST00000363762 77 ntBASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 RNU6-82P-201ENST00000363970 107 ntBASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 RNU6-1329P-201ENST00000365664 107 ntBASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 RNU6-325P-201ENST00000411132 105 ntBASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 AC138393.2-201ENST00000414742 246 ntBASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 EIF4EP4-201ENST00000424916 578 ntBASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 AC013470.1-201ENST00000453438 462 ntBASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 PMCHL2-203ENST00000457791 237 ntBASIC1.76□□□□□ -2.13
TRIM49D1C9J1S8 RNA5SP233-201ENST00000459153 113 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms