Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 OR51A5P-201ENST00000415429 942 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 AL591704.2-201ENST00000421658 181 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 MTCO2P11-201ENST00000431069 680 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 AL445567.1-201ENST00000439121 144 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 ZNF114P1-201ENST00000453500 292 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 RPL39P36-201ENST00000490784 156 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 AC112206.3-201ENST00000514578 389 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 Y_RNA.695-201ENST00000516715 107 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 Y_RNA.717-201ENST00000517106 92 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 AC022616.3-201ENST00000523940 148 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 LRRC34P1-201ENST00000542742 915 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 MIR3913-1-201ENST00000577744 102 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 AC005786.1-201ENST00000588553 154 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 AP000860.1-201ENST00000605250 559 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 AL161423.1-201ENST00000613700 262 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 RMST_4.1-201ENST00000616886 107 ntBASIC0.78□□□□□ -2.28
COL6A6A6NMZ7 RNU6-486P-201ENST00000363116 107 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 RNU6-25P-201ENST00000383873 107 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 RNU6-48P-201ENST00000384161 107 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 RNU6-16P-201ENST00000384385 107 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 RNU6-393P-201ENST00000384475 107 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 RNU6-15P-201ENST00000384534 107 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 RNU6-29P-201ENST00000384637 107 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 RNU6-606P-201ENST00000384721 111 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 MIR578-201ENST00000384828 96 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 AL365338.1-201ENST00000422282 858 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 SKA2P1-201ENST00000425592 390 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 MED13P1-201ENST00000428342 171 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 MTND1P26-201ENST00000440488 538 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 AC006026.2-201ENST00000457376 180 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 MTCO2P29-201ENST00000465212 189 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 AC022616.6-201ENST00000520479 119 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 AP003392.2-201ENST00000527269 208 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 AP002453.2-201ENST00000533503 320 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 AC007834.2-201ENST00000536310 343 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 HSBP1P1-201ENST00000555205 166 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 MIR4528-201ENST00000577763 90 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 AP002360.4-201ENST00000606980 481 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 AL133173.2-201ENST00000614270 90 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 AC026585.1-201ENST00000619582 524 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 Z69908.1-201ENST00000622603 247 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 AC011155.2-201ENST00000623202 216 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 AC078883.4-201ENST00000623218 367 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 AC093648.1-201ENST00000623546 606 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 U6.114-201ENST00000636407 96 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 Y_RNA.22-201ENST00000362492 102 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 RNU6-1210P-201ENST00000363775 107 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 RNU6-809P-201ENST00000384461 107 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 RNA5SP390-201ENST00000410191 113 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 RNU4-46P-201ENST00000410818 138 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 RPL23AP95-201ENST00000426806 265 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 NDUFB1P2-201ENST00000449477 176 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 RPS29P15-201ENST00000458329 171 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 AC096745.1-201ENST00000509945 370 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 RNU6-377P-201ENST00000515965 102 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 Y_RNA.687-201ENST00000516558 91 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 NIFKP6-201ENST00000598115 845 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 MIR3529-201ENST00000637713 78 ntBASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC0.77□□□□□ -2.29
COL6A6A6NMZ7 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 OR4G2P-201ENST00000328113 903 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 Y_RNA.255-201ENST00000364581 97 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 RNU6-43P-201ENST00000384302 107 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 RNU6-39P-201ENST00000384344 107 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 SNORA12-201ENST00000391162 147 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 RNU6-332P-201ENST00000391193 108 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AF228730.1-201ENST00000397972 663 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AC098592.1-201ENST00000419352 333 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AC008267.5-201ENST00000424928 265 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AC244670.1-201ENST00000436879 112 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AC073614.1-201ENST00000438690 650 ntBASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.76□□□□□ -2.29
COL6A6A6NMZ7 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms