Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 AC015911.1-201ENST00000495111 156 ntBASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 AL133373.1-201ENST00000497098 94 ntBASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 AC116562.3-201ENST00000506136 177 ntBASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 AC074344.1-201ENST00000512823 224 ntBASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 Y_RNA.672-201ENST00000516289 104 ntBASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 AC068587.5-201ENST00000528506 175 ntBASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 AC090115.3-201ENST00000553218 849 ntBASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 MIR4781-201ENST00000585250 76 ntBASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 AC005771.1-201ENST00000585581 349 ntBASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 AC008751.2-201ENST00000597885 980 ntBASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 AC090578.1-201ENST00000604955 591 ntBASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.8□□□□□ -2.28
TRAV41A0A0B4J266 AC106754.1-201ENST00000562632 1513 ntBASIC0.79□□□□□ -2.28
TRAV41A0A0B4J266 RNA5SP327-201ENST00000362494 101 ntBASIC0.79□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-862P-201ENST00000362804 105 ntBASIC0.79□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-1141P-201ENST00000364520 107 ntBASIC0.79□□□□□ -2.28
TRAV41A0A0B4J266 RNU5E-5P-201ENST00000365379 116 ntBASIC0.79□□□□□ -2.28
TRAV41A0A0B4J266 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.79□□□□□ -2.28
TRAV41A0A0B4J266 SNORA32.2-201ENST00000384049 122 ntBASIC0.79□□□□□ -2.28
TRAV41A0A0B4J266 SNORA29-201ENST00000384183 140 ntBASIC0.79□□□□□ -2.28
TRAV41A0A0B4J266 MIR520A-201ENST00000384862 85 ntBASIC0.79□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-550P-201ENST00000391057 101 ntBASIC0.79□□□□□ -2.28
TRAV41A0A0B4J266 EBAG9P1-201ENST00000418955 543 ntBASIC0.79□□□□□ -2.28
TRAV41A0A0B4J266 TAF9P1-201ENST00000445421 515 ntBASIC0.79□□□□□ -2.28
TRAV41A0A0B4J266 GAPDHP17-201ENST00000449858 1001 ntBASIC0.79□□□□□ -2.28
TRAV41A0A0B4J266 TAF9P2-201ENST00000454958 515 ntBASIC0.79□□□□□ -2.28
TRAV41A0A0B4J266 RPS23P4-201ENST00000487908 423 ntBASIC0.79□□□□□ -2.28
TRAV41A0A0B4J266 RNA5SP404-201ENST00000517118 132 ntBASIC0.79□□□□□ -2.28
TRAV41A0A0B4J266 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
TRAV41A0A0B4J266 SUMO2P18-201ENST00000518873 252 ntBASIC0.79□□□□□ -2.28
TRAV41A0A0B4J266 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.79□□□□□ -2.28
TRAV41A0A0B4J266 HMGB1P33-201ENST00000563485 527 ntBASIC0.79□□□□□ -2.28
TRAV41A0A0B4J266 AC109446.1-201ENST00000566172 220 ntBASIC0.79□□□□□ -2.28
TRAV41A0A0B4J266 AC015688.6-201ENST00000577737 104 ntBASIC0.79□□□□□ -2.28
TRAV41A0A0B4J266 MIR3937-201ENST00000580135 106 ntBASIC0.79□□□□□ -2.28
TRAV41A0A0B4J266 MIR3136-201ENST00000583498 78 ntBASIC0.79□□□□□ -2.28
TRAV41A0A0B4J266 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.79□□□□□ -2.28
TRAV41A0A0B4J266 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.79□□□□□ -2.28
TRAV41A0A0B4J266 TUSC7.1-201ENST00000610969 165 ntBASIC0.79□□□□□ -2.28
TRAV41A0A0B4J266 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.79□□□□□ -2.28
TRAV41A0A0B4J266 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.79□□□□□ -2.28
TRAV41A0A0B4J266 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.79□□□□□ -2.28
TRAV41A0A0B4J266 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
TRAV41A0A0B4J266 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 RNU4-38P-201ENST00000364472 129 ntBASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-715P-201ENST00000365204 103 ntBASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 Y_RNA.367-201ENST00000365544 101 ntBASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 SNORA20.2-201ENST00000383922 131 ntBASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 SNORA26.3-201ENST00000391119 136 ntBASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 MRPL35P1-201ENST00000404272 572 ntBASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-387P-201ENST00000411331 105 ntBASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 MRPL35P3-201ENST00000421557 364 ntBASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 AC244670.1-201ENST00000436879 112 ntBASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 Z73417.1-201ENST00000447373 778 ntBASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 USP9YP12-201ENST00000450481 570 ntBASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 ZNF114P1-201ENST00000453500 292 ntBASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 AL162395.1-201ENST00000457882 422 ntBASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 RNA5SP269-201ENST00000459032 137 ntBASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 MTCO2P6-201ENST00000463134 685 ntBASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 AC010531.2-201ENST00000465012 153 ntBASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-377P-201ENST00000515965 102 ntBASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 RNU7-40P-201ENST00000516397 64 ntBASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 RNU6-1098P-201ENST00000516772 96 ntBASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 RNU2-46P-201ENST00000517038 113 ntBASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 AC090572.1-201ENST00000519251 160 ntBASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 AP001893.2-201ENST00000526949 202 ntBASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 AC022878.1-201ENST00000530684 149 ntBASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 AC023050.3-201ENST00000541142 333 ntBASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 AC021231.3-201ENST00000558497 370 ntBASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 AC078795.3-201ENST00000602913 472 ntBASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 AL590229.1-201ENST00000603497 542 ntBASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 AC069114.2-201ENST00000604699 304 ntBASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 AP000240.1-201ENST00000609910 452 ntBASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 AC083806.3-201ENST00000614016 455 ntBASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 AC011155.2-201ENST00000623202 216 ntBASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 AL450472.1-202ENST00000637286 180 ntBASIC0.78□□□□□ -2.28
TRAV41A0A0B4J266 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.78□□□□□ -2.29
TRAV41A0A0B4J266 AC010615.1-201ENST00000594254 1764 ntBASIC0.78□□□□□ -2.29
TRAV41A0A0B4J266 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
TRAV41A0A0B4J266 SNORA63D-201ENST00000364359 132 ntBASIC0.77□□□□□ -2.29
TRAV41A0A0B4J266 RNU6-1065P-201ENST00000384513 106 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms