Protein–RNA interactions for Protein: A0A0A0MS05

TRBV5-7, T-cell receptor beta variable 5-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-7A0A0A0MS05 RNU6-911P-201ENST00000516523 104 ntBASIC2.56□□□□□ -2
TRBV5-7A0A0A0MS05 SNORA40.14-201ENST00000516543 86 ntBASIC2.56□□□□□ -2
TRBV5-7A0A0A0MS05 RNU6-1198P-201ENST00000516904 67 ntBASIC2.56□□□□□ -2
TRBV5-7A0A0A0MS05 RNU6-1137P-201ENST00000517073 99 ntBASIC2.56□□□□□ -2
TRBV5-7A0A0A0MS05 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.56□□□□□ -2
TRBV5-7A0A0A0MS05 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.56□□□□□ -2
TRBV5-7A0A0A0MS05 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.56□□□□□ -2
TRBV5-7A0A0A0MS05 CYP4A27P-201ENST00000567218 190 ntBASIC2.56□□□□□ -2
TRBV5-7A0A0A0MS05 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.56□□□□□ -2
TRBV5-7A0A0A0MS05 MIR5188-201ENST00000583467 113 ntBASIC2.56□□□□□ -2
TRBV5-7A0A0A0MS05 AC008737.2-201ENST00000599446 118 ntBASIC2.56□□□□□ -2
TRBV5-7A0A0A0MS05 AC008739.3-201ENST00000603262 127 ntBASIC2.56□□□□□ -2
TRBV5-7A0A0A0MS05 AL138963.2-201ENST00000605137 226 ntBASIC2.56□□□□□ -2
TRBV5-7A0A0A0MS05 AL162373.1-201ENST00000620433 407 ntBASIC2.56□□□□□ -2
TRBV5-7A0A0A0MS05 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.56□□□□□ -2
TRBV5-7A0A0A0MS05 ZNF72P-201ENST00000425869 1908 ntBASIC2.56□□□□□ -2
TRBV5-7A0A0A0MS05 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 MIR22-201ENST00000362190 85 ntBASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 SNORD14.1-201ENST00000365609 90 ntBASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 Y_RNA.389-201ENST00000383924 113 ntBASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 SNORA54-201ENST00000384281 123 ntBASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 MIR181A2-201ENST00000384863 110 ntBASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 MIR670-201ENST00000390142 98 ntBASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 Y_RNA.645-201ENST00000391229 102 ntBASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 UBA52P6-201ENST00000399822 382 ntBASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 MIR1289-1-201ENST00000408836 144 ntBASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 RNU6-985P-201ENST00000410182 104 ntBASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 RPS26P42-201ENST00000413485 326 ntBASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 MTCO3P19-201ENST00000415864 321 ntBASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 AC113618.1-201ENST00000416747 285 ntBASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 USP9YP16-201ENST00000430287 407 ntBASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 AP000705.1-201ENST00000454567 350 ntBASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 USP9YP23-201ENST00000455085 407 ntBASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 MTND5P16-201ENST00000460269 1703 ntBASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 RN7SL601P-201ENST00000471221 293 ntBASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 Y_RNA.721-201ENST00000517207 102 ntBASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 AC027176.1-201ENST00000560204 514 ntBASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 AC090617.3-201ENST00000573670 475 ntBASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 MIR4444-1-201ENST00000581696 74 ntBASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 MIR4444-2-201ENST00000584390 74 ntBASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 AC016727.2-201ENST00000603988 621 ntBASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 AL670379.2-201ENST00000604983 252 ntBASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 MIR6075-201ENST00000620782 95 ntBASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 AC010329.5-201ENST00000623497 2174 ntBASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.55□□□□□ -2
TRBV5-7A0A0A0MS05 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 SNORA68.1-201ENST00000364537 132 ntBASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 Y_RNA.319-201ENST00000365138 92 ntBASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 U8.10-201ENST00000384260 133 ntBASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 Y_RNA.527-201ENST00000384573 102 ntBASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 SNORA48.8-201ENST00000391324 134 ntBASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 MIR208B-201ENST00000401172 77 ntBASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 RNU6-101P-201ENST00000410323 104 ntBASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 MICF-203ENST00000432679 129 ntBASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 RPS3P1-201ENST00000456781 192 ntBASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 RN7SL293P-201ENST00000481765 281 ntBASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 RNU6-764P-201ENST00000516396 105 ntBASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 Y_RNA.720-201ENST00000517166 92 ntBASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 MIR2355-201ENST00000517199 87 ntBASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 AC023043.3-201ENST00000593113 385 ntBASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 RPL30P11-203ENST00000598995 310 ntBASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 AC010620.2-201ENST00000600135 313 ntBASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 AC104695.3-201ENST00000604052 296 ntBASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 AC091953.5-201ENST00000622919 233 ntBASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 MIR7157-201ENST00000635801 60 ntBASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 AC026241.1-201ENST00000517873 2142 ntBASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
TRBV5-7A0A0A0MS05 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.53□□□□□ -2
TRBV5-7A0A0A0MS05 RNU6-222P-201ENST00000362438 107 ntBASIC2.53□□□□□ -2
TRBV5-7A0A0A0MS05 RNU6-137P-201ENST00000363680 108 ntBASIC2.53□□□□□ -2
TRBV5-7A0A0A0MS05 Y_RNA.455-201ENST00000384230 98 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms