Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AL355877.2-201ENST00000603670 358 ntBASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 RAC1P9-201ENST00000604990 392 ntBASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 AC098479.1-201ENST00000609225 154 ntBASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 AC010889.1-201ENST00000566193 2666 ntBASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC187A0A096LP49 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC187A0A096LP49 RNU6-227P-201ENST00000362865 103 ntBASIC2.98□□□□□ -1.93
CCDC187A0A096LP49 SNORD56.1-201ENST00000362913 68 ntBASIC2.98□□□□□ -1.93
CCDC187A0A096LP49 Y_RNA.117-201ENST00000363294 101 ntBASIC2.98□□□□□ -1.93
CCDC187A0A096LP49 RNU4-42P-201ENST00000364738 142 ntBASIC2.98□□□□□ -1.93
CCDC187A0A096LP49 SNORD14.1-201ENST00000365609 90 ntBASIC2.98□□□□□ -1.93
CCDC187A0A096LP49 RNU6-843P-201ENST00000384454 104 ntBASIC2.98□□□□□ -1.93
CCDC187A0A096LP49 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC187A0A096LP49 RNU6-174P-201ENST00000410406 106 ntBASIC2.98□□□□□ -1.93
CCDC187A0A096LP49 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.98□□□□□ -1.93
CCDC187A0A096LP49 PTGES3P4-201ENST00000426243 356 ntBASIC2.98□□□□□ -1.93
CCDC187A0A096LP49 AC009414.1-201ENST00000427200 443 ntBASIC2.98□□□□□ -1.93
CCDC187A0A096LP49 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC187A0A096LP49 FCF1P4-201ENST00000448326 183 ntBASIC2.98□□□□□ -1.93
CCDC187A0A096LP49 AC091179.1-201ENST00000461606 579 ntBASIC2.98□□□□□ -1.93
CCDC187A0A096LP49 AC093852.1-201ENST00000503587 266 ntBASIC2.98□□□□□ -1.93
CCDC187A0A096LP49 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.98□□□□□ -1.93
CCDC187A0A096LP49 AC025465.3-201ENST00000510570 311 ntBASIC2.98□□□□□ -1.93
CCDC187A0A096LP49 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.98□□□□□ -1.93
CCDC187A0A096LP49 MIR2276-201ENST00000516886 89 ntBASIC2.98□□□□□ -1.93
CCDC187A0A096LP49 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.98□□□□□ -1.93
CCDC187A0A096LP49 AC019159.1-201ENST00000605094 187 ntBASIC2.98□□□□□ -1.93
CCDC187A0A096LP49 AC024581.2-201ENST00000619986 252 ntBASIC2.98□□□□□ -1.93
CCDC187A0A096LP49 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC187A0A096LP49 AC002064.3-201ENST00000623448 346 ntBASIC2.98□□□□□ -1.93
CCDC187A0A096LP49 AC097372.5-201ENST00000623665 376 ntBASIC2.98□□□□□ -1.93
CCDC187A0A096LP49 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC187A0A096LP49 AC009487.2-201ENST00000420969 6821 ntBASIC2.98□□□□□ -1.93
CCDC187A0A096LP49 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC187A0A096LP49 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CCDC187A0A096LP49 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC187A0A096LP49 RNU1-75P-201ENST00000347264 129 ntBASIC2.97□□□□□ -1.93
CCDC187A0A096LP49 RNU6-487P-201ENST00000365430 104 ntBASIC2.97□□□□□ -1.93
CCDC187A0A096LP49 Y_RNA.424-201ENST00000384063 103 ntBASIC2.97□□□□□ -1.93
CCDC187A0A096LP49 SNORA54-201ENST00000384281 123 ntBASIC2.97□□□□□ -1.93
CCDC187A0A096LP49 RNU6-748P-201ENST00000384648 107 ntBASIC2.97□□□□□ -1.93
CCDC187A0A096LP49 AL591034.2-201ENST00000402839 359 ntBASIC2.97□□□□□ -1.93
CCDC187A0A096LP49 AL031121.1-201ENST00000406553 254 ntBASIC2.97□□□□□ -1.93
CCDC187A0A096LP49 EEF1A1P41-201ENST00000414667 207 ntBASIC2.97□□□□□ -1.93
CCDC187A0A096LP49 AL139281.1-201ENST00000422120 335 ntBASIC2.97□□□□□ -1.93
CCDC187A0A096LP49 MTND3P9-201ENST00000429526 346 ntBASIC2.97□□□□□ -1.93
CCDC187A0A096LP49 BX679664.1-201ENST00000434429 253 ntBASIC2.97□□□□□ -1.93
CCDC187A0A096LP49 RPL23AP22-201ENST00000437556 453 ntBASIC2.97□□□□□ -1.93
CCDC187A0A096LP49 RPL23AP58-201ENST00000440453 469 ntBASIC2.97□□□□□ -1.93
CCDC187A0A096LP49 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC187A0A096LP49 RPS29P27-201ENST00000463711 170 ntBASIC2.97□□□□□ -1.93
CCDC187A0A096LP49 AC107626.1-201ENST00000471084 183 ntBASIC2.97□□□□□ -1.93
CCDC187A0A096LP49 GZMAP1-201ENST00000503054 631 ntBASIC2.97□□□□□ -1.93
CCDC187A0A096LP49 SNORA31.23-201ENST00000517219 133 ntBASIC2.97□□□□□ -1.93
CCDC187A0A096LP49 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC187A0A096LP49 AC068657.1-201ENST00000520807 306 ntBASIC2.97□□□□□ -1.93
CCDC187A0A096LP49 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC187A0A096LP49 AC040926.1-201ENST00000530195 238 ntBASIC2.97□□□□□ -1.93
CCDC187A0A096LP49 HSBP1P1-201ENST00000555205 166 ntBASIC2.97□□□□□ -1.93
CCDC187A0A096LP49 MIR4273-201ENST00000582824 84 ntBASIC2.97□□□□□ -1.93
CCDC187A0A096LP49 AC008739.2-201ENST00000597006 317 ntBASIC2.97□□□□□ -1.93
CCDC187A0A096LP49 RPL23AP78-201ENST00000599928 470 ntBASIC2.97□□□□□ -1.93
CCDC187A0A096LP49 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC187A0A096LP49 UCA1.1-201ENST00000620952 75 ntBASIC2.97□□□□□ -1.93
CCDC187A0A096LP49 AC241585.2-209ENST00000638217 143 ntBASIC2.97□□□□□ -1.93
CCDC187A0A096LP49 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC187A0A096LP49 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC187A0A096LP49 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.93
CCDC187A0A096LP49 Y_RNA.64-201ENST00000362845 102 ntBASIC2.96□□□□□ -1.94
CCDC187A0A096LP49 Y_RNA.555-201ENST00000384673 110 ntBASIC2.96□□□□□ -1.94
CCDC187A0A096LP49 Y_RNA.577-201ENST00000384794 101 ntBASIC2.96□□□□□ -1.94
CCDC187A0A096LP49 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CCDC187A0A096LP49 AP000275.1-201ENST00000411943 390 ntBASIC2.96□□□□□ -1.94
CCDC187A0A096LP49 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC187A0A096LP49 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC187A0A096LP49 AL590135.1-201ENST00000422215 156 ntBASIC2.96□□□□□ -1.94
CCDC187A0A096LP49 BX276092.3-201ENST00000424182 230 ntBASIC2.96□□□□□ -1.94
CCDC187A0A096LP49 AL358075.3-201ENST00000426289 226 ntBASIC2.96□□□□□ -1.94
CCDC187A0A096LP49 AC243964.1-201ENST00000441814 261 ntBASIC2.96□□□□□ -1.94
CCDC187A0A096LP49 AC007969.2-201ENST00000441891 191 ntBASIC2.96□□□□□ -1.94
CCDC187A0A096LP49 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC187A0A096LP49 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC187A0A096LP49 AL441985.1-201ENST00000457727 251 ntBASIC2.96□□□□□ -1.94
CCDC187A0A096LP49 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC187A0A096LP49 SNORA25.11-201ENST00000515935 105 ntBASIC2.96□□□□□ -1.94
CCDC187A0A096LP49 RNU6-138P-201ENST00000515952 107 ntBASIC2.96□□□□□ -1.94
CCDC187A0A096LP49 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.96□□□□□ -1.94
CCDC187A0A096LP49 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC187A0A096LP49 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC187A0A096LP49 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC187A0A096LP49 AL391813.1-201ENST00000603098 260 ntBASIC2.96□□□□□ -1.94
CCDC187A0A096LP49 AC096772.1-201ENST00000609146 564 ntBASIC2.96□□□□□ -1.94
CCDC187A0A096LP49 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC187A0A096LP49 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC187A0A096LP49 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC187A0A096LP49 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms