Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH9Q9ULB4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH9Q9ULB4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH9Q9ULB4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.04■□□□□ 0.8
CDH9Q9ULB4 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.04■□□□□ 0.8
CDH9Q9ULB4 AC117947.1-201ENST00000427448 529 ntBASIC20.04■□□□□ 0.8
CDH9Q9ULB4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDH9Q9ULB4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDH9Q9ULB4 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CDH9Q9ULB4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH9Q9ULB4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CDH9Q9ULB4 DUX4L26-201ENST00000489078 1255 ntBASIC20.04■□□□□ 0.8
CDH9Q9ULB4 COX11P1-201ENST00000489116 835 ntBASIC20.04■□□□□ 0.8
CDH9Q9ULB4 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.04■□□□□ 0.8
CDH9Q9ULB4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.04■□□□□ 0.8
CDH9Q9ULB4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.04■□□□□ 0.8
CDH9Q9ULB4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.04■□□□□ 0.8
CDH9Q9ULB4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH9Q9ULB4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDH9Q9ULB4 CR769767.2-201ENST00000622735 460 ntBASIC20.04■□□□□ 0.8
CDH9Q9ULB4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH9Q9ULB4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH9Q9ULB4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CDH9Q9ULB4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.04■□□□□ 0.8
CDH9Q9ULB4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.04■□□□□ 0.8
CDH9Q9ULB4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH9Q9ULB4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH9Q9ULB4 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH9Q9ULB4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CDH9Q9ULB4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDH9Q9ULB4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDH9Q9ULB4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CDH9Q9ULB4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.03■□□□□ 0.8
CDH9Q9ULB4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
CDH9Q9ULB4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH9Q9ULB4 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH9Q9ULB4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDH9Q9ULB4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH9Q9ULB4 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.03■□□□□ 0.8
CDH9Q9ULB4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CDH9Q9ULB4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.03■□□□□ 0.8
CDH9Q9ULB4 MCCD1P1-208ENST00000445732 328 ntBASIC20.03■□□□□ 0.8
CDH9Q9ULB4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.03■□□□□ 0.8
CDH9Q9ULB4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.03■□□□□ 0.8
CDH9Q9ULB4 WWOX-216ENST00000569818 525 ntBASIC20.03■□□□□ 0.8
CDH9Q9ULB4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.03■□□□□ 0.8
CDH9Q9ULB4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.03■□□□□ 0.8
CDH9Q9ULB4 AC139887.4-201ENST00000607877 719 ntBASIC20.03■□□□□ 0.8
CDH9Q9ULB4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.03■□□□□ 0.8
CDH9Q9ULB4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH9Q9ULB4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH9Q9ULB4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CDH9Q9ULB4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH9Q9ULB4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDH9Q9ULB4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDH9Q9ULB4 AL512353.2-201ENST00000448759 1962 ntBASIC20.03■□□□□ 0.8
CDH9Q9ULB4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.03■□□□□ 0.8
CDH9Q9ULB4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDH9Q9ULB4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDH9Q9ULB4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.02■□□□□ 0.8
CDH9Q9ULB4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.02■□□□□ 0.8
CDH9Q9ULB4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDH9Q9ULB4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH9Q9ULB4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH9Q9ULB4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.02■□□□□ 0.8
CDH9Q9ULB4 AK4P3-201ENST00000418260 669 ntBASIC20.02■□□□□ 0.8
CDH9Q9ULB4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.02■□□□□ 0.8
CDH9Q9ULB4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.02■□□□□ 0.8
CDH9Q9ULB4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDH9Q9ULB4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.02■□□□□ 0.8
CDH9Q9ULB4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDH9Q9ULB4 AL031432.5-201ENST00000641059 760 ntBASIC20.02■□□□□ 0.8
CDH9Q9ULB4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.02■□□□□ 0.8
CDH9Q9ULB4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
CDH9Q9ULB4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.02■□□□□ 0.79
CDH9Q9ULB4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CDH9Q9ULB4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.79
CDH9Q9ULB4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
CDH9Q9ULB4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
CDH9Q9ULB4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH9Q9ULB4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CDH9Q9ULB4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.01■□□□□ 0.79
CDH9Q9ULB4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH9Q9ULB4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.01■□□□□ 0.79
CDH9Q9ULB4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH9Q9ULB4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.01■□□□□ 0.79
CDH9Q9ULB4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDH9Q9ULB4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH9Q9ULB4 AP000523.1-201ENST00000398242 1049 ntBASIC20.01■□□□□ 0.79
CDH9Q9ULB4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.01■□□□□ 0.79
CDH9Q9ULB4 AC009947.2-201ENST00000444014 672 ntBASIC20.01■□□□□ 0.79
CDH9Q9ULB4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH9Q9ULB4 YBX1P2-201ENST00000489612 999 ntBASIC20.01■□□□□ 0.79
CDH9Q9ULB4 NEK4P2-201ENST00000580004 1012 ntBASIC20.01■□□□□ 0.79
CDH9Q9ULB4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.01■□□□□ 0.79
CDH9Q9ULB4 AL590326.2-201ENST00000625139 305 ntBASIC20.01■□□□□ 0.79
CDH9Q9ULB4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH9Q9ULB4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH9Q9ULB4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
CDH9Q9ULB4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms