Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.93■□□□□ 0.62
LRFN3Q9BTN0 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
LRFN3Q9BTN0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRFN3Q9BTN0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRFN3Q9BTN0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.93■□□□□ 0.62
LRFN3Q9BTN0 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.93■□□□□ 0.62
LRFN3Q9BTN0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRFN3Q9BTN0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
LRFN3Q9BTN0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRFN3Q9BTN0 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRFN3Q9BTN0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
LRFN3Q9BTN0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
LRFN3Q9BTN0 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.92■□□□□ 0.62
LRFN3Q9BTN0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.92■□□□□ 0.62
LRFN3Q9BTN0 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRFN3Q9BTN0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRFN3Q9BTN0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.92■□□□□ 0.62
LRFN3Q9BTN0 IGHGP-201ENST00000390555 1178 ntBASIC18.92■□□□□ 0.62
LRFN3Q9BTN0 RBM17P3-201ENST00000417687 1192 ntBASIC18.92■□□□□ 0.62
LRFN3Q9BTN0 AC096582.2-201ENST00000510860 516 ntBASIC18.92■□□□□ 0.62
LRFN3Q9BTN0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRFN3Q9BTN0 AC190387.1-201ENST00000551683 408 ntBASIC18.92■□□□□ 0.62
LRFN3Q9BTN0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.92■□□□□ 0.62
LRFN3Q9BTN0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.92■□□□□ 0.62
LRFN3Q9BTN0 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.92■□□□□ 0.62
LRFN3Q9BTN0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRFN3Q9BTN0 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRFN3Q9BTN0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRFN3Q9BTN0 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.92■□□□□ 0.62
LRFN3Q9BTN0 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRFN3Q9BTN0 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
LRFN3Q9BTN0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRFN3Q9BTN0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRFN3Q9BTN0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRFN3Q9BTN0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
LRFN3Q9BTN0 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.91■□□□□ 0.62
LRFN3Q9BTN0 HLA-V-201ENST00000429037 534 ntBASIC18.91■□□□□ 0.62
LRFN3Q9BTN0 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.91■□□□□ 0.62
LRFN3Q9BTN0 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.91■□□□□ 0.62
LRFN3Q9BTN0 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
LRFN3Q9BTN0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.91■□□□□ 0.62
LRFN3Q9BTN0 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
LRFN3Q9BTN0 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.91■□□□□ 0.62
LRFN3Q9BTN0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRFN3Q9BTN0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.91■□□□□ 0.62
LRFN3Q9BTN0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRFN3Q9BTN0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRFN3Q9BTN0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRFN3Q9BTN0 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
LRFN3Q9BTN0 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.91■□□□□ 0.62
LRFN3Q9BTN0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.91■□□□□ 0.62
LRFN3Q9BTN0 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
LRFN3Q9BTN0 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRFN3Q9BTN0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRFN3Q9BTN0 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRFN3Q9BTN0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRFN3Q9BTN0 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
LRFN3Q9BTN0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRFN3Q9BTN0 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
LRFN3Q9BTN0 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRFN3Q9BTN0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
LRFN3Q9BTN0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRFN3Q9BTN0 YBX1P5-201ENST00000509441 847 ntBASIC18.9■□□□□ 0.62
LRFN3Q9BTN0 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.9■□□□□ 0.62
LRFN3Q9BTN0 AC012640.2-201ENST00000561606 901 ntBASIC18.9■□□□□ 0.62
LRFN3Q9BTN0 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRFN3Q9BTN0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.9■□□□□ 0.62
LRFN3Q9BTN0 AF228730.6-201ENST00000641497 218 ntBASIC18.9■□□□□ 0.62
LRFN3Q9BTN0 AC084121.3-201ENST00000641716 218 ntBASIC18.9■□□□□ 0.62
LRFN3Q9BTN0 AC105233.6-201ENST00000642093 218 ntBASIC18.9■□□□□ 0.62
LRFN3Q9BTN0 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
LRFN3Q9BTN0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRFN3Q9BTN0 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRFN3Q9BTN0 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRFN3Q9BTN0 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.9■□□□□ 0.62
LRFN3Q9BTN0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRFN3Q9BTN0 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRFN3Q9BTN0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
LRFN3Q9BTN0 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.89■□□□□ 0.61
LRFN3Q9BTN0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.89■□□□□ 0.61
LRFN3Q9BTN0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRFN3Q9BTN0 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.89■□□□□ 0.61
LRFN3Q9BTN0 CNN2P11-201ENST00000429351 262 ntBASIC18.89■□□□□ 0.61
LRFN3Q9BTN0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.89■□□□□ 0.61
LRFN3Q9BTN0 AC021087.4-201ENST00000563761 564 ntBASIC18.89■□□□□ 0.61
LRFN3Q9BTN0 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.89■□□□□ 0.61
LRFN3Q9BTN0 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.89■□□□□ 0.61
LRFN3Q9BTN0 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.89■□□□□ 0.61
LRFN3Q9BTN0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
LRFN3Q9BTN0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRFN3Q9BTN0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRFN3Q9BTN0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRFN3Q9BTN0 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LRFN3Q9BTN0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRFN3Q9BTN0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRFN3Q9BTN0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.88■□□□□ 0.61
LRFN3Q9BTN0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.88■□□□□ 0.61
LRFN3Q9BTN0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRFN3Q9BTN0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LRFN3Q9BTN0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms