Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rab40bQ8VHP8 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rab40bQ8VHP8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Rab40bQ8VHP8 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rab40bQ8VHP8 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rab40bQ8VHP8 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rab40bQ8VHP8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rab40bQ8VHP8 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rab40bQ8VHP8 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.53□□□□□ -0.08
Rab40bQ8VHP8 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rab40bQ8VHP8 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Rab40bQ8VHP8 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rab40bQ8VHP8 Phf7-203ENSMUST00000226565 1971 ntBASIC14.53□□□□□ -0.08
Rab40bQ8VHP8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rab40bQ8VHP8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rab40bQ8VHP8 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.53□□□□□ -0.08
Rab40bQ8VHP8 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Rab40bQ8VHP8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rab40bQ8VHP8 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.53□□□□□ -0.08
Rab40bQ8VHP8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.53□□□□□ -0.08
Rab40bQ8VHP8 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rab40bQ8VHP8 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rab40bQ8VHP8 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rab40bQ8VHP8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rab40bQ8VHP8 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rab40bQ8VHP8 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Rab40bQ8VHP8 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rab40bQ8VHP8 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rab40bQ8VHP8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rab40bQ8VHP8 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rab40bQ8VHP8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.52□□□□□ -0.08
Rab40bQ8VHP8 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rab40bQ8VHP8 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rab40bQ8VHP8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Rab40bQ8VHP8 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rab40bQ8VHP8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rab40bQ8VHP8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rab40bQ8VHP8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rab40bQ8VHP8 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rab40bQ8VHP8 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rab40bQ8VHP8 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rab40bQ8VHP8 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rab40bQ8VHP8 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rab40bQ8VHP8 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rab40bQ8VHP8 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rab40bQ8VHP8 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Rab40bQ8VHP8 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rab40bQ8VHP8 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rab40bQ8VHP8 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.52□□□□□ -0.09
Rab40bQ8VHP8 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rab40bQ8VHP8 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rab40bQ8VHP8 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Rab40bQ8VHP8 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rab40bQ8VHP8 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40bQ8VHP8 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40bQ8VHP8 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.51□□□□□ -0.09
Rab40bQ8VHP8 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40bQ8VHP8 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40bQ8VHP8 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40bQ8VHP8 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40bQ8VHP8 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Rab40bQ8VHP8 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40bQ8VHP8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40bQ8VHP8 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.51□□□□□ -0.09
Rab40bQ8VHP8 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40bQ8VHP8 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40bQ8VHP8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40bQ8VHP8 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
Rab40bQ8VHP8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Rab40bQ8VHP8 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.51□□□□□ -0.09
Rab40bQ8VHP8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40bQ8VHP8 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.51□□□□□ -0.09
Rab40bQ8VHP8 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40bQ8VHP8 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40bQ8VHP8 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40bQ8VHP8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40bQ8VHP8 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.51□□□□□ -0.09
Rab40bQ8VHP8 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40bQ8VHP8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40bQ8VHP8 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40bQ8VHP8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rab40bQ8VHP8 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Rab40bQ8VHP8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab40bQ8VHP8 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab40bQ8VHP8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab40bQ8VHP8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab40bQ8VHP8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab40bQ8VHP8 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab40bQ8VHP8 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Rab40bQ8VHP8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab40bQ8VHP8 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Rab40bQ8VHP8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab40bQ8VHP8 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rab40bQ8VHP8 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Rab40bQ8VHP8 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Rab40bQ8VHP8 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab40bQ8VHP8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.5□□□□□ -0.09
Rab40bQ8VHP8 Timm23-208ENSMUST00000226683 750 ntBASIC14.5□□□□□ -0.09
Rab40bQ8VHP8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rab40bQ8VHP8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms