Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps39Q8R5L3 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vps39Q8R5L3 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps39Q8R5L3 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps39Q8R5L3 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
Vps39Q8R5L3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Vps39Q8R5L3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.17■□□□□ 0.18
Vps39Q8R5L3 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.17■□□□□ 0.18
Vps39Q8R5L3 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps39Q8R5L3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.17■□□□□ 0.18
Vps39Q8R5L3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vps39Q8R5L3 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps39Q8R5L3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps39Q8R5L3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps39Q8R5L3 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.17■□□□□ 0.18
Vps39Q8R5L3 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps39Q8R5L3 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.17■□□□□ 0.18
Vps39Q8R5L3 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps39Q8R5L3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Vps39Q8R5L3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Vps39Q8R5L3 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.17■□□□□ 0.18
Vps39Q8R5L3 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Vps39Q8R5L3 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Vps39Q8R5L3 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps39Q8R5L3 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps39Q8R5L3 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.16■□□□□ 0.18
Vps39Q8R5L3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.16■□□□□ 0.18
Vps39Q8R5L3 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vps39Q8R5L3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Vps39Q8R5L3 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps39Q8R5L3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps39Q8R5L3 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps39Q8R5L3 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Vps39Q8R5L3 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Vps39Q8R5L3 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps39Q8R5L3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Vps39Q8R5L3 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Vps39Q8R5L3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Vps39Q8R5L3 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.16■□□□□ 0.18
Vps39Q8R5L3 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Vps39Q8R5L3 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Vps39Q8R5L3 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps39Q8R5L3 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps39Q8R5L3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.16■□□□□ 0.18
Vps39Q8R5L3 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps39Q8R5L3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vps39Q8R5L3 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
Vps39Q8R5L3 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Vps39Q8R5L3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vps39Q8R5L3 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vps39Q8R5L3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vps39Q8R5L3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps39Q8R5L3 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vps39Q8R5L3 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vps39Q8R5L3 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.15■□□□□ 0.18
Vps39Q8R5L3 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps39Q8R5L3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Vps39Q8R5L3 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.15■□□□□ 0.18
Vps39Q8R5L3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps39Q8R5L3 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps39Q8R5L3 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps39Q8R5L3 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps39Q8R5L3 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vps39Q8R5L3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps39Q8R5L3 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Vps39Q8R5L3 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Vps39Q8R5L3 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Vps39Q8R5L3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps39Q8R5L3 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps39Q8R5L3 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps39Q8R5L3 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps39Q8R5L3 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps39Q8R5L3 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vps39Q8R5L3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Vps39Q8R5L3 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Vps39Q8R5L3 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps39Q8R5L3 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Vps39Q8R5L3 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vps39Q8R5L3 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vps39Q8R5L3 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vps39Q8R5L3 Gm15565-201ENSMUST00000118890 427 ntBASIC16.14■□□□□ 0.17
Vps39Q8R5L3 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps39Q8R5L3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Vps39Q8R5L3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.14■□□□□ 0.17
Vps39Q8R5L3 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.14■□□□□ 0.17
Vps39Q8R5L3 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.14■□□□□ 0.17
Vps39Q8R5L3 Gm21559-201ENSMUST00000220638 855 ntBASIC16.14■□□□□ 0.17
Vps39Q8R5L3 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.14■□□□□ 0.17
Vps39Q8R5L3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps39Q8R5L3 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps39Q8R5L3 Gm8587-201ENSMUST00000076538 843 ntBASIC16.14■□□□□ 0.17
Vps39Q8R5L3 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps39Q8R5L3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps39Q8R5L3 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.14■□□□□ 0.17
Vps39Q8R5L3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.14■□□□□ 0.17
Vps39Q8R5L3 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps39Q8R5L3 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps39Q8R5L3 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vps39Q8R5L3 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vps39Q8R5L3 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms