Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clcn4Q61418 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Clcn4Q61418 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Clcn4Q61418 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clcn4Q61418 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clcn4Q61418 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clcn4Q61418 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Clcn4Q61418 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clcn4Q61418 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clcn4Q61418 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Clcn4Q61418 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clcn4Q61418 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clcn4Q61418 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.88□□□□□ -0.03
Clcn4Q61418 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clcn4Q61418 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Clcn4Q61418 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Clcn4Q61418 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Clcn4Q61418 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Clcn4Q61418 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.88□□□□□ -0.03
Clcn4Q61418 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clcn4Q61418 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Clcn4Q61418 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.88□□□□□ -0.03
Clcn4Q61418 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clcn4Q61418 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clcn4Q61418 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Clcn4Q61418 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clcn4Q61418 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clcn4Q61418 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clcn4Q61418 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Clcn4Q61418 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clcn4Q61418 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Clcn4Q61418 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Clcn4Q61418 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clcn4Q61418 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clcn4Q61418 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clcn4Q61418 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clcn4Q61418 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Clcn4Q61418 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clcn4Q61418 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Clcn4Q61418 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Clcn4Q61418 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Clcn4Q61418 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.87□□□□□ -0.03
Clcn4Q61418 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Clcn4Q61418 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Clcn4Q61418 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clcn4Q61418 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clcn4Q61418 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Clcn4Q61418 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Clcn4Q61418 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clcn4Q61418 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.87□□□□□ -0.03
Clcn4Q61418 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clcn4Q61418 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Clcn4Q61418 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Clcn4Q61418 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Clcn4Q61418 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Clcn4Q61418 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Clcn4Q61418 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.86□□□□□ -0.03
Clcn4Q61418 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clcn4Q61418 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clcn4Q61418 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clcn4Q61418 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.86□□□□□ -0.03
Clcn4Q61418 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Clcn4Q61418 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clcn4Q61418 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clcn4Q61418 Gm25016-201ENSMUST00000158399 131 ntBASIC14.86□□□□□ -0.03
Clcn4Q61418 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Clcn4Q61418 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clcn4Q61418 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clcn4Q61418 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clcn4Q61418 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clcn4Q61418 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clcn4Q61418 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Clcn4Q61418 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Clcn4Q61418 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clcn4Q61418 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clcn4Q61418 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clcn4Q61418 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clcn4Q61418 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clcn4Q61418 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clcn4Q61418 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clcn4Q61418 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Clcn4Q61418 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.86□□□□□ -0.03
Clcn4Q61418 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Clcn4Q61418 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Clcn4Q61418 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Clcn4Q61418 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn4Q61418 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn4Q61418 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn4Q61418 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Clcn4Q61418 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn4Q61418 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn4Q61418 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn4Q61418 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Clcn4Q61418 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Clcn4Q61418 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn4Q61418 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn4Q61418 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn4Q61418 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn4Q61418 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Clcn4Q61418 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms