Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hnf4aP49698 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hnf4aP49698 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hnf4aP49698 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hnf4aP49698 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hnf4aP49698 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hnf4aP49698 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.65■□□□□ 0.1
Hnf4aP49698 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hnf4aP49698 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hnf4aP49698 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hnf4aP49698 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Hnf4aP49698 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Hnf4aP49698 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hnf4aP49698 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hnf4aP49698 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.65■□□□□ 0.1
Hnf4aP49698 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Hnf4aP49698 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Hnf4aP49698 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.65■□□□□ 0.1
Hnf4aP49698 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hnf4aP49698 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Hnf4aP49698 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hnf4aP49698 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Hnf4aP49698 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Hnf4aP49698 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Hnf4aP49698 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hnf4aP49698 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hnf4aP49698 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hnf4aP49698 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hnf4aP49698 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hnf4aP49698 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Hnf4aP49698 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hnf4aP49698 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hnf4aP49698 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hnf4aP49698 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hnf4aP49698 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hnf4aP49698 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Hnf4aP49698 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hnf4aP49698 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hnf4aP49698 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hnf4aP49698 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hnf4aP49698 Gm10231-201ENSMUST00000181584 441 ntBASIC15.64■□□□□ 0.09
Hnf4aP49698 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hnf4aP49698 Gm10175-202ENSMUST00000208752 441 ntBASIC15.64■□□□□ 0.09
Hnf4aP49698 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hnf4aP49698 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hnf4aP49698 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hnf4aP49698 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hnf4aP49698 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Hnf4aP49698 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hnf4aP49698 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hnf4aP49698 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hnf4aP49698 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hnf4aP49698 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hnf4aP49698 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hnf4aP49698 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hnf4aP49698 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hnf4aP49698 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hnf4aP49698 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Hnf4aP49698 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.63■□□□□ 0.09
Hnf4aP49698 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hnf4aP49698 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.63■□□□□ 0.09
Hnf4aP49698 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hnf4aP49698 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hnf4aP49698 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hnf4aP49698 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hnf4aP49698 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.63■□□□□ 0.09
Hnf4aP49698 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.63■□□□□ 0.09
Hnf4aP49698 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hnf4aP49698 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hnf4aP49698 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hnf4aP49698 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hnf4aP49698 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hnf4aP49698 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hnf4aP49698 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Hnf4aP49698 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hnf4aP49698 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hnf4aP49698 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hnf4aP49698 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hnf4aP49698 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hnf4aP49698 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hnf4aP49698 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hnf4aP49698 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Hnf4aP49698 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hnf4aP49698 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hnf4aP49698 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hnf4aP49698 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hnf4aP49698 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hnf4aP49698 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Hnf4aP49698 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hnf4aP49698 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hnf4aP49698 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Hnf4aP49698 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hnf4aP49698 Gm9013-201ENSMUST00000132939 882 ntBASIC15.62■□□□□ 0.09
Hnf4aP49698 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.62■□□□□ 0.09
Hnf4aP49698 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hnf4aP49698 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.62■□□□□ 0.09
Hnf4aP49698 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hnf4aP49698 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.62■□□□□ 0.09
Hnf4aP49698 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hnf4aP49698 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms