Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.13■□□□□ 0.65
COL4A2P08572 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.13■□□□□ 0.65
COL4A2P08572 AP002469.2-201ENST00000531724 424 ntBASIC19.13■□□□□ 0.65
COL4A2P08572 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.13■□□□□ 0.65
COL4A2P08572 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL4A2P08572 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.13■□□□□ 0.65
COL4A2P08572 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL4A2P08572 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COL4A2P08572 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.12■□□□□ 0.65
COL4A2P08572 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.12■□□□□ 0.65
COL4A2P08572 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
COL4A2P08572 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
COL4A2P08572 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A2P08572 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A2P08572 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
COL4A2P08572 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A2P08572 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.12■□□□□ 0.65
COL4A2P08572 KRT18P31-201ENST00000506277 1292 ntBASIC19.12■□□□□ 0.65
COL4A2P08572 AL160237.2-201ENST00000556165 472 ntBASIC19.12■□□□□ 0.65
COL4A2P08572 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
COL4A2P08572 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A2P08572 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A2P08572 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
COL4A2P08572 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A2P08572 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A2P08572 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A2P08572 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.12■□□□□ 0.65
COL4A2P08572 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A2P08572 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.12■□□□□ 0.65
COL4A2P08572 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A2P08572 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COL4A2P08572 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.12■□□□□ 0.65
COL4A2P08572 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.12■□□□□ 0.65
COL4A2P08572 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
COL4A2P08572 AC092667.1-201ENST00000434301 2586 ntBASIC19.12■□□□□ 0.65
COL4A2P08572 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
COL4A2P08572 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL4A2P08572 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL4A2P08572 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL4A2P08572 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.11■□□□□ 0.65
COL4A2P08572 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL4A2P08572 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL4A2P08572 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.11■□□□□ 0.65
COL4A2P08572 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
COL4A2P08572 KRT18P23-201ENST00000435622 1283 ntBASIC19.11■□□□□ 0.65
COL4A2P08572 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL4A2P08572 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.11■□□□□ 0.65
COL4A2P08572 AC104819.1-201ENST00000504587 486 ntBASIC19.11■□□□□ 0.65
COL4A2P08572 AP000867.3-201ENST00000524675 377 ntBASIC19.11■□□□□ 0.65
COL4A2P08572 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL4A2P08572 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL4A2P08572 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL4A2P08572 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.11■□□□□ 0.65
COL4A2P08572 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL4A2P08572 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL4A2P08572 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL4A2P08572 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL4A2P08572 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COL4A2P08572 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL4A2P08572 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
COL4A2P08572 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
COL4A2P08572 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL4A2P08572 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.11■□□□□ 0.65
COL4A2P08572 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.11■□□□□ 0.65
COL4A2P08572 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.11■□□□□ 0.65
COL4A2P08572 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.11■□□□□ 0.65
COL4A2P08572 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.11■□□□□ 0.65
COL4A2P08572 TP73-AS1-207ENST00000624167 988 ntBASIC19.11■□□□□ 0.65
COL4A2P08572 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL4A2P08572 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
COL4A2P08572 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COL4A2P08572 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL4A2P08572 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.1■□□□□ 0.65
COL4A2P08572 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL4A2P08572 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL4A2P08572 AL109659.2-201ENST00000606809 1674 ntBASIC19.1■□□□□ 0.65
COL4A2P08572 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL4A2P08572 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL4A2P08572 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
COL4A2P08572 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL4A2P08572 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL4A2P08572 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
COL4A2P08572 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL4A2P08572 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL4A2P08572 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.1■□□□□ 0.65
COL4A2P08572 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL4A2P08572 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL4A2P08572 Z83836.1-201ENST00000624605 1642 ntBASIC19.1■□□□□ 0.65
COL4A2P08572 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COL4A2P08572 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.1■□□□□ 0.65
COL4A2P08572 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.1■□□□□ 0.65
COL4A2P08572 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
COL4A2P08572 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COL4A2P08572 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL4A2P08572 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.09■□□□□ 0.65
COL4A2P08572 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL4A2P08572 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL4A2P08572 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.09■□□□□ 0.65
COL4A2P08572 FOSL1P1-201ENST00000511041 816 ntBASIC19.09■□□□□ 0.65
COL4A2P08572 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms