Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 AC019159.1-201ENST00000605094 187 ntBASIC3.33□□□□□ -1.88
NR2E3Q9Y5X4 AC005014.2-201ENST00000607795 599 ntBASIC3.33□□□□□ -1.88
NR2E3Q9Y5X4 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.33□□□□□ -1.88
NR2E3Q9Y5X4 AC024581.2-201ENST00000619986 252 ntBASIC3.33□□□□□ -1.88
NR2E3Q9Y5X4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 RNU6-227P-201ENST00000362865 103 ntBASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 SNORD56.1-201ENST00000362913 68 ntBASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 SNORA18.3-201ENST00000384122 132 ntBASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 MIR521-1-201ENST00000384902 87 ntBASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 SNORD67-201ENST00000390833 111 ntBASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 RNU6-482P-201ENST00000391068 107 ntBASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 RNA5SP354-201ENST00000391247 136 ntBASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 RPL21P3-201ENST00000395517 478 ntBASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 Y_RNA.605-201ENST00000410577 105 ntBASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 CST9LP2-201ENST00000437612 320 ntBASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 AL441985.1-201ENST00000457727 251 ntBASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 AC146507.2-201ENST00000460608 476 ntBASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 AC107626.1-201ENST00000471084 183 ntBASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 SNORA25.10-201ENST00000515926 124 ntBASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 RNU6-307P-201ENST00000516743 106 ntBASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 SNORA31.23-201ENST00000517219 133 ntBASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 AL117187.1-201ENST00000555482 181 ntBASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 SUB1P3-201ENST00000564581 315 ntBASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 AC005899.2-201ENST00000584353 90 ntBASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 AC104695.3-201ENST00000604052 296 ntBASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 MIR3976-201ENST00000606807 139 ntBASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 AC006157.1-201ENST00000611750 366 ntBASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 AC097372.5-201ENST00000623665 376 ntBASIC3.32□□□□□ -1.88
NR2E3Q9Y5X4 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 Y_RNA.48-201ENST00000362710 103 ntBASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 RNU6-1309P-201ENST00000363305 108 ntBASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 RNU1-115P-201ENST00000365329 160 ntBASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 Y_RNA.364-201ENST00000365532 101 ntBASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 AC117470.1-201ENST00000381974 330 ntBASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 AL591034.2-201ENST00000402839 359 ntBASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 RNU2-52P-201ENST00000410680 190 ntBASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 AP000275.1-201ENST00000411943 390 ntBASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 AC007969.2-201ENST00000441891 191 ntBASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 CHEK2P4-201ENST00000450340 246 ntBASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 RPS29P27-201ENST00000463711 170 ntBASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 RPS27P26-201ENST00000494583 239 ntBASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 Y_RNA.661-201ENST00000516003 99 ntBASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 RNU5B-3P-201ENST00000516601 115 ntBASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 RNU4-77P-201ENST00000516692 156 ntBASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 CKS1BP7-201ENST00000522230 235 ntBASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 CBX3P8-201ENST00000532412 525 ntBASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 AC007536.1-201ENST00000533382 349 ntBASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 SNORD58B-201ENST00000607313 66 ntBASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 RNU6-91P-201ENST00000607774 107 ntBASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 AC091903.1-201ENST00000624322 454 ntBASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 AC073476.4-201ENST00000628409 72 ntBASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 AC241585.2-209ENST00000638217 143 ntBASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.31□□□□□ -1.88
NR2E3Q9Y5X4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NR2E3Q9Y5X4 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.3□□□□□ -1.88
NR2E3Q9Y5X4 SNORA51.4-201ENST00000364993 124 ntBASIC3.3□□□□□ -1.88
NR2E3Q9Y5X4 RNU6-574P-201ENST00000384265 107 ntBASIC3.3□□□□□ -1.88
NR2E3Q9Y5X4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.3□□□□□ -1.88
NR2E3Q9Y5X4 RNA5SP390-201ENST00000410191 113 ntBASIC3.3□□□□□ -1.88
NR2E3Q9Y5X4 RNA5SP344-201ENST00000411081 104 ntBASIC3.3□□□□□ -1.88
NR2E3Q9Y5X4 HMGB3P2-201ENST00000411913 584 ntBASIC3.3□□□□□ -1.88
NR2E3Q9Y5X4 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.3□□□□□ -1.88
NR2E3Q9Y5X4 MTND3P9-201ENST00000429526 346 ntBASIC3.3□□□□□ -1.88
NR2E3Q9Y5X4 AC243964.1-201ENST00000441814 261 ntBASIC3.3□□□□□ -1.88
NR2E3Q9Y5X4 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
NR2E3Q9Y5X4 FO393415.2-201ENST00000480085 343 ntBASIC3.3□□□□□ -1.88
NR2E3Q9Y5X4 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.3□□□□□ -1.88
NR2E3Q9Y5X4 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.3□□□□□ -1.88
NR2E3Q9Y5X4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.3□□□□□ -1.88
NR2E3Q9Y5X4 AC015712.3-201ENST00000559380 164 ntBASIC3.3□□□□□ -1.88
NR2E3Q9Y5X4 AL355877.2-201ENST00000603670 358 ntBASIC3.3□□□□□ -1.88
NR2E3Q9Y5X4 AL356157.2-201ENST00000605122 111 ntBASIC3.3□□□□□ -1.88
NR2E3Q9Y5X4 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.3□□□□□ -1.88
NR2E3Q9Y5X4 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.3□□□□□ -1.88
NR2E3Q9Y5X4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.3□□□□□ -1.88
NR2E3Q9Y5X4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
NR2E3Q9Y5X4 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NR2E3Q9Y5X4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
NR2E3Q9Y5X4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
NR2E3Q9Y5X4 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
NR2E3Q9Y5X4 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms