Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SNX9Q9Y5X1 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SNX9Q9Y5X1 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.66□□□□□ -1.98
SNX9Q9Y5X1 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SNX9Q9Y5X1 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.66□□□□□ -1.98
SNX9Q9Y5X1 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SNX9Q9Y5X1 RNU6-1280P-201ENST00000365211 107 ntBASIC2.66□□□□□ -1.98
SNX9Q9Y5X1 RNU6-596P-201ENST00000365395 98 ntBASIC2.66□□□□□ -1.98
SNX9Q9Y5X1 U8.8-201ENST00000365399 135 ntBASIC2.66□□□□□ -1.98
SNX9Q9Y5X1 MIR592-201ENST00000384959 97 ntBASIC2.66□□□□□ -1.98
SNX9Q9Y5X1 RNU6-174P-201ENST00000410406 106 ntBASIC2.66□□□□□ -1.98
SNX9Q9Y5X1 RNU6-293P-201ENST00000411259 106 ntBASIC2.66□□□□□ -1.98
SNX9Q9Y5X1 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.66□□□□□ -1.98
SNX9Q9Y5X1 Y_RNA.639-201ENST00000458981 102 ntBASIC2.66□□□□□ -1.98
SNX9Q9Y5X1 RPL7P42-201ENST00000481005 679 ntBASIC2.66□□□□□ -1.98
SNX9Q9Y5X1 AP001025.1-201ENST00000486139 332 ntBASIC2.66□□□□□ -1.98
SNX9Q9Y5X1 MRPL42P6-201ENST00000486397 371 ntBASIC2.66□□□□□ -1.98
SNX9Q9Y5X1 AC018437.1-201ENST00000492214 406 ntBASIC2.66□□□□□ -1.98
SNX9Q9Y5X1 AC097473.1-201ENST00000508142 408 ntBASIC2.66□□□□□ -1.98
SNX9Q9Y5X1 Y_RNA.708-201ENST00000516950 96 ntBASIC2.66□□□□□ -1.98
SNX9Q9Y5X1 SNORA31.23-201ENST00000517219 133 ntBASIC2.66□□□□□ -1.98
SNX9Q9Y5X1 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.66□□□□□ -1.98
SNX9Q9Y5X1 AL121821.2-201ENST00000556081 394 ntBASIC2.66□□□□□ -1.98
SNX9Q9Y5X1 ANP32BP3-201ENST00000559213 706 ntBASIC2.66□□□□□ -1.98
SNX9Q9Y5X1 AC093249.1-201ENST00000567049 203 ntBASIC2.66□□□□□ -1.98
SNX9Q9Y5X1 MIR5690-201ENST00000583739 73 ntBASIC2.66□□□□□ -1.98
SNX9Q9Y5X1 VN1R107P-201ENST00000601784 209 ntBASIC2.66□□□□□ -1.98
SNX9Q9Y5X1 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SNX9Q9Y5X1 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SNX9Q9Y5X1 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
SNX9Q9Y5X1 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
SNX9Q9Y5X1 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
SNX9Q9Y5X1 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
SNX9Q9Y5X1 Y_RNA.187-201ENST00000363918 113 ntBASIC2.65□□□□□ -1.99
SNX9Q9Y5X1 RNA5SP456-201ENST00000364002 114 ntBASIC2.65□□□□□ -1.99
SNX9Q9Y5X1 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SNX9Q9Y5X1 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.65□□□□□ -1.99
SNX9Q9Y5X1 AC096649.2-201ENST00000416186 393 ntBASIC2.65□□□□□ -1.99
SNX9Q9Y5X1 AC074117.2-201ENST00000417130 397 ntBASIC2.65□□□□□ -1.99
SNX9Q9Y5X1 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC2.65□□□□□ -1.99
SNX9Q9Y5X1 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SNX9Q9Y5X1 AL161651.1-201ENST00000440882 223 ntBASIC2.65□□□□□ -1.99
SNX9Q9Y5X1 AC007969.2-201ENST00000441891 191 ntBASIC2.65□□□□□ -1.99
SNX9Q9Y5X1 AC027575.1-201ENST00000481064 460 ntBASIC2.65□□□□□ -1.99
SNX9Q9Y5X1 AK3P2-201ENST00000507976 429 ntBASIC2.65□□□□□ -1.99
SNX9Q9Y5X1 RNA5SP384-201ENST00000516615 116 ntBASIC2.65□□□□□ -1.99
SNX9Q9Y5X1 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.65□□□□□ -1.99
SNX9Q9Y5X1 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.65□□□□□ -1.99
SNX9Q9Y5X1 MIR4513-201ENST00000581077 86 ntBASIC2.65□□□□□ -1.99
SNX9Q9Y5X1 AL356280.1-201ENST00000603614 379 ntBASIC2.65□□□□□ -1.99
SNX9Q9Y5X1 MIR3976-201ENST00000606807 139 ntBASIC2.65□□□□□ -1.99
SNX9Q9Y5X1 MIR3199-2-201ENST00000636243 86 ntBASIC2.65□□□□□ -1.99
SNX9Q9Y5X1 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.65□□□□□ -1.99
SNX9Q9Y5X1 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
SNX9Q9Y5X1 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.65□□□□□ -1.99
SNX9Q9Y5X1 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SNX9Q9Y5X1 DEFA7P-201ENST00000382676 285 ntBASIC2.64□□□□□ -1.99
SNX9Q9Y5X1 Y_RNA.395-201ENST00000383945 109 ntBASIC2.64□□□□□ -1.99
SNX9Q9Y5X1 RNU6-1227P-201ENST00000383981 107 ntBASIC2.64□□□□□ -1.99
SNX9Q9Y5X1 RNU6-474P-201ENST00000384243 107 ntBASIC2.64□□□□□ -1.99
SNX9Q9Y5X1 RNU2-49P-201ENST00000410666 184 ntBASIC2.64□□□□□ -1.99
SNX9Q9Y5X1 RPS15AP10-201ENST00000432472 382 ntBASIC2.64□□□□□ -1.99
SNX9Q9Y5X1 AC243964.1-201ENST00000441814 261 ntBASIC2.64□□□□□ -1.99
SNX9Q9Y5X1 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.64□□□□□ -1.99
SNX9Q9Y5X1 AC104389.3-201ENST00000445629 235 ntBASIC2.64□□□□□ -1.99
SNX9Q9Y5X1 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.64□□□□□ -1.99
SNX9Q9Y5X1 Y_RNA.653-201ENST00000459091 95 ntBASIC2.64□□□□□ -1.99
SNX9Q9Y5X1 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.64□□□□□ -1.99
SNX9Q9Y5X1 AC093303.1-201ENST00000514549 295 ntBASIC2.64□□□□□ -1.99
SNX9Q9Y5X1 RNU5F-8P-201ENST00000515941 111 ntBASIC2.64□□□□□ -1.99
SNX9Q9Y5X1 ACA59.2-201ENST00000517061 156 ntBASIC2.64□□□□□ -1.99
SNX9Q9Y5X1 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.64□□□□□ -1.99
SNX9Q9Y5X1 ADAM3A-203ENST00000461344 2157 ntBASIC2.64□□□□□ -1.99
SNX9Q9Y5X1 AC010329.5-201ENST00000623497 2174 ntBASIC2.64□□□□□ -1.99
SNX9Q9Y5X1 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SNX9Q9Y5X1 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.64□□□□□ -1.99
SNX9Q9Y5X1 MIR6073-201ENST00000352083 89 ntBASIC2.63□□□□□ -1.99
SNX9Q9Y5X1 XGY1-201ENST00000381172 446 ntBASIC2.63□□□□□ -1.99
SNX9Q9Y5X1 RNU6-843P-201ENST00000384454 104 ntBASIC2.63□□□□□ -1.99
SNX9Q9Y5X1 SNORD116-20-201ENST00000384529 92 ntBASIC2.63□□□□□ -1.99
SNX9Q9Y5X1 RNU6-1011P-201ENST00000384668 107 ntBASIC2.63□□□□□ -1.99
SNX9Q9Y5X1 RNU6-331P-201ENST00000384724 107 ntBASIC2.63□□□□□ -1.99
SNX9Q9Y5X1 RNU6-750P-201ENST00000390946 107 ntBASIC2.63□□□□□ -1.99
SNX9Q9Y5X1 AL359511.1-201ENST00000402970 211 ntBASIC2.63□□□□□ -1.99
SNX9Q9Y5X1 AC004383.1-201ENST00000438135 289 ntBASIC2.63□□□□□ -1.99
SNX9Q9Y5X1 DAP3P1-201ENST00000441522 278 ntBASIC2.63□□□□□ -1.99
SNX9Q9Y5X1 OSTCP8-201ENST00000445117 448 ntBASIC2.63□□□□□ -1.99
SNX9Q9Y5X1 AL031659.1-201ENST00000447075 539 ntBASIC2.63□□□□□ -1.99
SNX9Q9Y5X1 RPL30P15-201ENST00000457129 321 ntBASIC2.63□□□□□ -1.99
SNX9Q9Y5X1 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.63□□□□□ -1.99
SNX9Q9Y5X1 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.63□□□□□ -1.99
SNX9Q9Y5X1 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.63□□□□□ -1.99
SNX9Q9Y5X1 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.63□□□□□ -1.99
SNX9Q9Y5X1 RNU6-612P-201ENST00000516909 102 ntBASIC2.63□□□□□ -1.99
SNX9Q9Y5X1 AP005902.1-201ENST00000521358 186 ntBASIC2.63□□□□□ -1.99
SNX9Q9Y5X1 AC009163.5-201ENST00000575421 637 ntBASIC2.63□□□□□ -1.99
SNX9Q9Y5X1 MIR5194-201ENST00000582634 120 ntBASIC2.63□□□□□ -1.99
SNX9Q9Y5X1 BNIP3P16-201ENST00000589779 534 ntBASIC2.63□□□□□ -1.99
SNX9Q9Y5X1 AC078795.3-201ENST00000602913 472 ntBASIC2.63□□□□□ -1.99
SNX9Q9Y5X1 AL080274.1-201ENST00000605565 220 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms