Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 AC006517.1-201ENST00000480485 328 ntBASIC4.33□□□□□ -1.72
HCN4Q9Y3Q4 RNU6-436P-201ENST00000516171 114 ntBASIC4.33□□□□□ -1.72
HCN4Q9Y3Q4 SNORD116-25-201ENST00000516517 92 ntBASIC4.33□□□□□ -1.72
HCN4Q9Y3Q4 RNU7-121P-201ENST00000516604 62 ntBASIC4.33□□□□□ -1.72
HCN4Q9Y3Q4 RNU2-12P-201ENST00000517216 168 ntBASIC4.33□□□□□ -1.72
HCN4Q9Y3Q4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.33□□□□□ -1.72
HCN4Q9Y3Q4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.33□□□□□ -1.72
HCN4Q9Y3Q4 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.33□□□□□ -1.72
HCN4Q9Y3Q4 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC4.33□□□□□ -1.72
HCN4Q9Y3Q4 Y_RNA.778-201ENST00000620203 90 ntBASIC4.33□□□□□ -1.72
HCN4Q9Y3Q4 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
HCN4Q9Y3Q4 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HCN4Q9Y3Q4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.33□□□□□ -1.72
HCN4Q9Y3Q4 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.33□□□□□ -1.72
HCN4Q9Y3Q4 AL672296.1-201ENST00000427780 2158 ntBASIC4.33□□□□□ -1.72
HCN4Q9Y3Q4 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
HCN4Q9Y3Q4 Z82217.1-201ENST00000625157 8149 ntBASIC4.32□□□□□ -1.72
HCN4Q9Y3Q4 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
HCN4Q9Y3Q4 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.32□□□□□ -1.72
HCN4Q9Y3Q4 MIR186-201ENST00000384988 86 ntBASIC4.32□□□□□ -1.72
HCN4Q9Y3Q4 MIR549A-201ENST00000385268 96 ntBASIC4.32□□□□□ -1.72
HCN4Q9Y3Q4 RNU6-239P-201ENST00000390990 99 ntBASIC4.32□□□□□ -1.72
HCN4Q9Y3Q4 AL691449.1-201ENST00000426570 421 ntBASIC4.32□□□□□ -1.72
HCN4Q9Y3Q4 AL591419.1-201ENST00000427423 339 ntBASIC4.32□□□□□ -1.72
HCN4Q9Y3Q4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.32□□□□□ -1.72
HCN4Q9Y3Q4 RN7SL601P-201ENST00000471221 293 ntBASIC4.32□□□□□ -1.72
HCN4Q9Y3Q4 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.32□□□□□ -1.72
HCN4Q9Y3Q4 RNA5SP446-201ENST00000515955 82 ntBASIC4.32□□□□□ -1.72
HCN4Q9Y3Q4 HIGD1AP1-201ENST00000550979 275 ntBASIC4.32□□□□□ -1.72
HCN4Q9Y3Q4 MIR3923-201ENST00000579521 83 ntBASIC4.32□□□□□ -1.72
HCN4Q9Y3Q4 SNORD98-201ENST00000636377 67 ntBASIC4.32□□□□□ -1.72
HCN4Q9Y3Q4 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
HCN4Q9Y3Q4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
HCN4Q9Y3Q4 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HCN4Q9Y3Q4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HCN4Q9Y3Q4 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.32□□□□□ -1.72
HCN4Q9Y3Q4 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
HCN4Q9Y3Q4 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.31□□□□□ -1.72
HCN4Q9Y3Q4 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HCN4Q9Y3Q4 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HCN4Q9Y3Q4 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HCN4Q9Y3Q4 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HCN4Q9Y3Q4 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.31□□□□□ -1.72
HCN4Q9Y3Q4 AC011266.1-201ENST00000624119 3569 ntBASIC4.31□□□□□ -1.72
HCN4Q9Y3Q4 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HCN4Q9Y3Q4 RNU6-275P-201ENST00000364910 107 ntBASIC4.31□□□□□ -1.72
HCN4Q9Y3Q4 RNU6-1264P-201ENST00000383891 107 ntBASIC4.31□□□□□ -1.72
HCN4Q9Y3Q4 EI24P2-201ENST00000397776 1076 ntBASIC4.31□□□□□ -1.72
HCN4Q9Y3Q4 MIR208B-201ENST00000401172 77 ntBASIC4.31□□□□□ -1.72
HCN4Q9Y3Q4 HSPE1P26-201ENST00000405341 275 ntBASIC4.31□□□□□ -1.72
HCN4Q9Y3Q4 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.31□□□□□ -1.72
HCN4Q9Y3Q4 U3.40-201ENST00000408706 208 ntBASIC4.31□□□□□ -1.72
HCN4Q9Y3Q4 RNU2-37P-201ENST00000410695 177 ntBASIC4.31□□□□□ -1.72
HCN4Q9Y3Q4 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.31□□□□□ -1.72
HCN4Q9Y3Q4 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.31□□□□□ -1.72
HCN4Q9Y3Q4 AL110115.1-201ENST00000614396 364 ntBASIC4.31□□□□□ -1.72
HCN4Q9Y3Q4 MIR3199-2-201ENST00000636243 86 ntBASIC4.31□□□□□ -1.72
HCN4Q9Y3Q4 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HCN4Q9Y3Q4 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
HCN4Q9Y3Q4 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HCN4Q9Y3Q4 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HCN4Q9Y3Q4 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HCN4Q9Y3Q4 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.3□□□□□ -1.72
HCN4Q9Y3Q4 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
HCN4Q9Y3Q4 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HCN4Q9Y3Q4 RNU6-763P-201ENST00000390865 106 ntBASIC4.3□□□□□ -1.72
HCN4Q9Y3Q4 Y_RNA.629-201ENST00000411368 105 ntBASIC4.3□□□□□ -1.72
HCN4Q9Y3Q4 EBAG9P1-201ENST00000418955 543 ntBASIC4.3□□□□□ -1.72
HCN4Q9Y3Q4 RPS20P10-201ENST00000451209 253 ntBASIC4.3□□□□□ -1.72
HCN4Q9Y3Q4 AC012671.1-201ENST00000451912 203 ntBASIC4.3□□□□□ -1.72
HCN4Q9Y3Q4 RPS4XP13-201ENST00000483219 789 ntBASIC4.3□□□□□ -1.72
HCN4Q9Y3Q4 RNU5F-2P-201ENST00000516066 82 ntBASIC4.3□□□□□ -1.72
HCN4Q9Y3Q4 AC136628.3-201ENST00000521868 290 ntBASIC4.3□□□□□ -1.72
HCN4Q9Y3Q4 AC100767.1-201ENST00000528178 123 ntBASIC4.3□□□□□ -1.72
HCN4Q9Y3Q4 CYCSP30-201ENST00000546447 172 ntBASIC4.3□□□□□ -1.72
HCN4Q9Y3Q4 TGIF1P1-201ENST00000558095 802 ntBASIC4.3□□□□□ -1.72
HCN4Q9Y3Q4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.3□□□□□ -1.72
HCN4Q9Y3Q4 AL365222.1-201ENST00000614661 98 ntBASIC4.3□□□□□ -1.72
HCN4Q9Y3Q4 AC004825.2-201ENST00000616634 455 ntBASIC4.3□□□□□ -1.72
HCN4Q9Y3Q4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC4.3□□□□□ -1.72
HCN4Q9Y3Q4 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HCN4Q9Y3Q4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.3□□□□□ -1.72
HCN4Q9Y3Q4 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HCN4Q9Y3Q4 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HCN4Q9Y3Q4 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.3□□□□□ -1.72
HCN4Q9Y3Q4 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
HCN4Q9Y3Q4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
HCN4Q9Y3Q4 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
HCN4Q9Y3Q4 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HCN4Q9Y3Q4 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HCN4Q9Y3Q4 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.29□□□□□ -1.72
HCN4Q9Y3Q4 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.29□□□□□ -1.72
HCN4Q9Y3Q4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
HCN4Q9Y3Q4 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.29□□□□□ -1.72
HCN4Q9Y3Q4 RNU6-727P-201ENST00000363592 107 ntBASIC4.29□□□□□ -1.72
HCN4Q9Y3Q4 RNU6-151P-201ENST00000364158 107 ntBASIC4.29□□□□□ -1.72
HCN4Q9Y3Q4 RNA5SP267-201ENST00000364893 126 ntBASIC4.29□□□□□ -1.72
HCN4Q9Y3Q4 MIR569-201ENST00000385228 96 ntBASIC4.29□□□□□ -1.72
HCN4Q9Y3Q4 RNU6-381P-201ENST00000391259 108 ntBASIC4.29□□□□□ -1.72
HCN4Q9Y3Q4 CBX3P9-201ENST00000402326 552 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms