Protein–RNA interactions for Protein: Q9Y3B4

SF3B6, Splicing factor 3B subunit 6, humanhuman

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6Q9Y3B4 AC011471.1-201ENST00000585766 187 ntBASIC3.47□□□□□ -1.85
SF3B6Q9Y3B4 MIR3674-201ENST00000636576 68 ntBASIC3.47□□□□□ -1.85
SF3B6Q9Y3B4 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.47□□□□□ -1.85
SF3B6Q9Y3B4 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SF3B6Q9Y3B4 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
SF3B6Q9Y3B4 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.47□□□□□ -1.85
SF3B6Q9Y3B4 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.47□□□□□ -1.85
SF3B6Q9Y3B4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.47□□□□□ -1.85
SF3B6Q9Y3B4 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
SF3B6Q9Y3B4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.85
SF3B6Q9Y3B4 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.46□□□□□ -1.85
SF3B6Q9Y3B4 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.46□□□□□ -1.85
SF3B6Q9Y3B4 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.46□□□□□ -1.85
SF3B6Q9Y3B4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SF3B6Q9Y3B4 snoU2_19.1-201ENST00000362361 80 ntBASIC3.46□□□□□ -1.86
SF3B6Q9Y3B4 SNORA60-201ENST00000362396 134 ntBASIC3.46□□□□□ -1.86
SF3B6Q9Y3B4 RNU6-1020P-201ENST00000363684 107 ntBASIC3.46□□□□□ -1.86
SF3B6Q9Y3B4 RNU6-1210P-201ENST00000363775 107 ntBASIC3.46□□□□□ -1.86
SF3B6Q9Y3B4 RNU6-682P-201ENST00000363843 106 ntBASIC3.46□□□□□ -1.86
SF3B6Q9Y3B4 SNORA18.2-201ENST00000383865 132 ntBASIC3.46□□□□□ -1.86
SF3B6Q9Y3B4 AC091390.1-201ENST00000433904 331 ntBASIC3.46□□□□□ -1.86
SF3B6Q9Y3B4 AC004386.2-201ENST00000441858 148 ntBASIC3.46□□□□□ -1.86
SF3B6Q9Y3B4 RPS29P31-201ENST00000446147 164 ntBASIC3.46□□□□□ -1.86
SF3B6Q9Y3B4 HMGN2P7-201ENST00000456186 273 ntBASIC3.46□□□□□ -1.86
SF3B6Q9Y3B4 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
SF3B6Q9Y3B4 RNY3P16-201ENST00000516338 101 ntBASIC3.46□□□□□ -1.86
SF3B6Q9Y3B4 RNU6-107P-201ENST00000516643 102 ntBASIC3.46□□□□□ -1.86
SF3B6Q9Y3B4 RNU6-861P-201ENST00000516745 106 ntBASIC3.46□□□□□ -1.86
SF3B6Q9Y3B4 MIR2116-201ENST00000517221 80 ntBASIC3.46□□□□□ -1.86
SF3B6Q9Y3B4 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.46□□□□□ -1.86
SF3B6Q9Y3B4 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.46□□□□□ -1.86
SF3B6Q9Y3B4 uc_338.32-201ENST00000615087 172 ntBASIC3.46□□□□□ -1.86
SF3B6Q9Y3B4 AC005562.2-201ENST00000618264 111 ntBASIC3.46□□□□□ -1.86
SF3B6Q9Y3B4 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SF3B6Q9Y3B4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
SF3B6Q9Y3B4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.45□□□□□ -1.86
SF3B6Q9Y3B4 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SF3B6Q9Y3B4 U3.9-201ENST00000363823 204 ntBASIC3.45□□□□□ -1.86
SF3B6Q9Y3B4 RNA5SP399-201ENST00000364003 117 ntBASIC3.45□□□□□ -1.86
SF3B6Q9Y3B4 SNORD87-201ENST00000364849 89 ntBASIC3.45□□□□□ -1.86
SF3B6Q9Y3B4 AC068538.1-201ENST00000376856 336 ntBASIC3.45□□□□□ -1.86
SF3B6Q9Y3B4 RNU1-57P-201ENST00000384491 166 ntBASIC3.45□□□□□ -1.86
SF3B6Q9Y3B4 RNA5SP475-201ENST00000410568 110 ntBASIC3.45□□□□□ -1.86
SF3B6Q9Y3B4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.45□□□□□ -1.86
SF3B6Q9Y3B4 AC074198.2-201ENST00000508153 258 ntBASIC3.45□□□□□ -1.86
SF3B6Q9Y3B4 RNU6-1231P-201ENST00000517185 103 ntBASIC3.45□□□□□ -1.86
SF3B6Q9Y3B4 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.45□□□□□ -1.86
SF3B6Q9Y3B4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.45□□□□□ -1.86
SF3B6Q9Y3B4 CYCSP29-201ENST00000533731 318 ntBASIC3.45□□□□□ -1.86
SF3B6Q9Y3B4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.45□□□□□ -1.86
SF3B6Q9Y3B4 MIR4738-201ENST00000579134 87 ntBASIC3.45□□□□□ -1.86
SF3B6Q9Y3B4 DEFB117-201ENST00000602356 141 ntBASIC3.45□□□□□ -1.86
SF3B6Q9Y3B4 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.45□□□□□ -1.86
SF3B6Q9Y3B4 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SF3B6Q9Y3B4 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SF3B6Q9Y3B4 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SF3B6Q9Y3B4 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SF3B6Q9Y3B4 Y_RNA.217-201ENST00000364214 105 ntBASIC3.44□□□□□ -1.86
SF3B6Q9Y3B4 RNU6-923P-201ENST00000364753 107 ntBASIC3.44□□□□□ -1.86
SF3B6Q9Y3B4 RNU6-1310P-201ENST00000384153 107 ntBASIC3.44□□□□□ -1.86
SF3B6Q9Y3B4 MIR767-201ENST00000390228 109 ntBASIC3.44□□□□□ -1.86
SF3B6Q9Y3B4 RNU2-54P-201ENST00000410299 190 ntBASIC3.44□□□□□ -1.86
SF3B6Q9Y3B4 Y_RNA.597-201ENST00000410463 100 ntBASIC3.44□□□□□ -1.86
SF3B6Q9Y3B4 Z98742.2-201ENST00000431564 187 ntBASIC3.44□□□□□ -1.86
SF3B6Q9Y3B4 RPS3P1-201ENST00000456781 192 ntBASIC3.44□□□□□ -1.86
SF3B6Q9Y3B4 SNORD2.1-201ENST00000458762 69 ntBASIC3.44□□□□□ -1.86
SF3B6Q9Y3B4 Y_RNA.641-201ENST00000459414 105 ntBASIC3.44□□□□□ -1.86
SF3B6Q9Y3B4 RN7SL132P-201ENST00000478131 296 ntBASIC3.44□□□□□ -1.86
SF3B6Q9Y3B4 RNU6-191P-201ENST00000516295 94 ntBASIC3.44□□□□□ -1.86
SF3B6Q9Y3B4 RN7SKP209-201ENST00000516888 304 ntBASIC3.44□□□□□ -1.86
SF3B6Q9Y3B4 RNU1-117P-201ENST00000517041 158 ntBASIC3.44□□□□□ -1.86
SF3B6Q9Y3B4 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.44□□□□□ -1.86
SF3B6Q9Y3B4 MIR5006-201ENST00000583027 110 ntBASIC3.44□□□□□ -1.86
SF3B6Q9Y3B4 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SF3B6Q9Y3B4 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.44□□□□□ -1.86
SF3B6Q9Y3B4 AC010620.2-201ENST00000600135 313 ntBASIC3.44□□□□□ -1.86
SF3B6Q9Y3B4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SF3B6Q9Y3B4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SF3B6Q9Y3B4 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
SF3B6Q9Y3B4 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.43□□□□□ -1.86
SF3B6Q9Y3B4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
SF3B6Q9Y3B4 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
SF3B6Q9Y3B4 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
SF3B6Q9Y3B4 TNPO1P3-201ENST00000436471 2662 ntBASIC3.43□□□□□ -1.86
SF3B6Q9Y3B4 RNA5SP295-201ENST00000362655 121 ntBASIC3.43□□□□□ -1.86
SF3B6Q9Y3B4 Y_RNA.464-201ENST00000384282 110 ntBASIC3.43□□□□□ -1.86
SF3B6Q9Y3B4 MIR3074-201ENST00000384885 81 ntBASIC3.43□□□□□ -1.86
SF3B6Q9Y3B4 SNORA12-201ENST00000391162 147 ntBASIC3.43□□□□□ -1.86
SF3B6Q9Y3B4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.43□□□□□ -1.86
SF3B6Q9Y3B4 AC009963.1-201ENST00000417265 157 ntBASIC3.43□□□□□ -1.86
SF3B6Q9Y3B4 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.43□□□□□ -1.86
SF3B6Q9Y3B4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.43□□□□□ -1.86
SF3B6Q9Y3B4 AC026784.1-201ENST00000507986 352 ntBASIC3.43□□□□□ -1.86
SF3B6Q9Y3B4 RNU6-255P-201ENST00000516957 105 ntBASIC3.43□□□□□ -1.86
SF3B6Q9Y3B4 HSPE1P18-201ENST00000517602 280 ntBASIC3.43□□□□□ -1.86
SF3B6Q9Y3B4 AC079598.5-201ENST00000547460 117 ntBASIC3.43□□□□□ -1.86
SF3B6Q9Y3B4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.43□□□□□ -1.86
SF3B6Q9Y3B4 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.43□□□□□ -1.86
SF3B6Q9Y3B4 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.43□□□□□ -1.86
SF3B6Q9Y3B4 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms