Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AL162713.1-201ENST00000604480 262 ntBASIC4.84□□□□□ -1.63
ZC3H4Q9UPT8 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.84□□□□□ -1.63
ZC3H4Q9UPT8 ZNF962P-201ENST00000443465 3140 ntBASIC4.84□□□□□ -1.64
ZC3H4Q9UPT8 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
ZC3H4Q9UPT8 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
ZC3H4Q9UPT8 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
ZC3H4Q9UPT8 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.64
ZC3H4Q9UPT8 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
ZC3H4Q9UPT8 RNU6-257P-201ENST00000410238 98 ntBASIC4.83□□□□□ -1.64
ZC3H4Q9UPT8 RPS26P42-201ENST00000413485 326 ntBASIC4.83□□□□□ -1.64
ZC3H4Q9UPT8 CR769767.1-201ENST00000436337 346 ntBASIC4.83□□□□□ -1.64
ZC3H4Q9UPT8 HMGB1P37-201ENST00000439613 609 ntBASIC4.83□□□□□ -1.64
ZC3H4Q9UPT8 AC008267.6-201ENST00000441664 139 ntBASIC4.83□□□□□ -1.64
ZC3H4Q9UPT8 RPL26P9-201ENST00000457466 433 ntBASIC4.83□□□□□ -1.64
ZC3H4Q9UPT8 RPS29P20-201ENST00000489592 171 ntBASIC4.83□□□□□ -1.64
ZC3H4Q9UPT8 RPS27AP10-201ENST00000496103 208 ntBASIC4.83□□□□□ -1.64
ZC3H4Q9UPT8 RPL23AP94-201ENST00000512518 302 ntBASIC4.83□□□□□ -1.64
ZC3H4Q9UPT8 RNU6-107P-201ENST00000516643 102 ntBASIC4.83□□□□□ -1.64
ZC3H4Q9UPT8 AC025627.2-201ENST00000576220 160 ntBASIC4.83□□□□□ -1.64
ZC3H4Q9UPT8 MIR3922-201ENST00000585192 84 ntBASIC4.83□□□□□ -1.64
ZC3H4Q9UPT8 MIR3674-201ENST00000636576 68 ntBASIC4.83□□□□□ -1.64
ZC3H4Q9UPT8 MIR3529-201ENST00000637713 78 ntBASIC4.83□□□□□ -1.64
ZC3H4Q9UPT8 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.83□□□□□ -1.64
ZC3H4Q9UPT8 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ZC3H4Q9UPT8 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.83□□□□□ -1.64
ZC3H4Q9UPT8 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
ZC3H4Q9UPT8 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.82□□□□□ -1.64
ZC3H4Q9UPT8 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
ZC3H4Q9UPT8 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
ZC3H4Q9UPT8 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ZC3H4Q9UPT8 MIR448-201ENST00000362131 111 ntBASIC4.82□□□□□ -1.64
ZC3H4Q9UPT8 Y_RNA.121-201ENST00000363309 113 ntBASIC4.82□□□□□ -1.64
ZC3H4Q9UPT8 Y_RNA.329-201ENST00000365209 107 ntBASIC4.82□□□□□ -1.64
ZC3H4Q9UPT8 MIR513A2-201ENST00000385249 127 ntBASIC4.82□□□□□ -1.64
ZC3H4Q9UPT8 SNORD66.1-201ENST00000391230 76 ntBASIC4.82□□□□□ -1.64
ZC3H4Q9UPT8 EI24P2-201ENST00000397776 1076 ntBASIC4.82□□□□□ -1.64
ZC3H4Q9UPT8 MIR208B-201ENST00000401172 77 ntBASIC4.82□□□□□ -1.64
ZC3H4Q9UPT8 RNU2-54P-201ENST00000410299 190 ntBASIC4.82□□□□□ -1.64
ZC3H4Q9UPT8 RNU6-1199P-201ENST00000411249 104 ntBASIC4.82□□□□□ -1.64
ZC3H4Q9UPT8 ELOCP21-201ENST00000412558 336 ntBASIC4.82□□□□□ -1.64
ZC3H4Q9UPT8 NDUFS5P4-201ENST00000412983 318 ntBASIC4.82□□□□□ -1.64
ZC3H4Q9UPT8 AC115115.1-201ENST00000449927 248 ntBASIC4.82□□□□□ -1.64
ZC3H4Q9UPT8 AC090525.1-201ENST00000479116 478 ntBASIC4.82□□□□□ -1.64
ZC3H4Q9UPT8 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.82□□□□□ -1.64
ZC3H4Q9UPT8 SCARNA14-201ENST00000516903 136 ntBASIC4.82□□□□□ -1.64
ZC3H4Q9UPT8 RNA5SP179-201ENST00000517284 121 ntBASIC4.82□□□□□ -1.64
ZC3H4Q9UPT8 CKS1BP7-201ENST00000522230 235 ntBASIC4.82□□□□□ -1.64
ZC3H4Q9UPT8 AL110115.1-201ENST00000614396 364 ntBASIC4.82□□□□□ -1.64
ZC3H4Q9UPT8 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC4.82□□□□□ -1.64
ZC3H4Q9UPT8 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ZC3H4Q9UPT8 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ZC3H4Q9UPT8 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
ZC3H4Q9UPT8 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.82□□□□□ -1.64
ZC3H4Q9UPT8 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ZC3H4Q9UPT8 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
ZC3H4Q9UPT8 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.81□□□□□ -1.64
ZC3H4Q9UPT8 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ZC3H4Q9UPT8 MIR569-201ENST00000385228 96 ntBASIC4.81□□□□□ -1.64
ZC3H4Q9UPT8 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.81□□□□□ -1.64
ZC3H4Q9UPT8 BX510359.1-201ENST00000456973 237 ntBASIC4.81□□□□□ -1.64
ZC3H4Q9UPT8 RN7SL807P-201ENST00000470923 297 ntBASIC4.81□□□□□ -1.64
ZC3H4Q9UPT8 AL049873.1-201ENST00000480540 376 ntBASIC4.81□□□□□ -1.64
ZC3H4Q9UPT8 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.81□□□□□ -1.64
ZC3H4Q9UPT8 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.81□□□□□ -1.64
ZC3H4Q9UPT8 AC002076.2-201ENST00000617362 122 ntBASIC4.81□□□□□ -1.64
ZC3H4Q9UPT8 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.8□□□□□ -1.64
ZC3H4Q9UPT8 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ZC3H4Q9UPT8 SNORD20-201ENST00000384550 80 ntBASIC4.8□□□□□ -1.64
ZC3H4Q9UPT8 MIR320B2-201ENST00000408479 138 ntBASIC4.8□□□□□ -1.64
ZC3H4Q9UPT8 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.8□□□□□ -1.64
ZC3H4Q9UPT8 ATP5A1P2-201ENST00000412323 255 ntBASIC4.8□□□□□ -1.64
ZC3H4Q9UPT8 AC009963.1-201ENST00000417265 157 ntBASIC4.8□□□□□ -1.64
ZC3H4Q9UPT8 YPEL5P1-201ENST00000419731 367 ntBASIC4.8□□□□□ -1.64
ZC3H4Q9UPT8 AC099548.1-201ENST00000421443 426 ntBASIC4.8□□□□□ -1.64
ZC3H4Q9UPT8 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.8□□□□□ -1.64
ZC3H4Q9UPT8 HLA-N-201ENST00000437516 135 ntBASIC4.8□□□□□ -1.64
ZC3H4Q9UPT8 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.8□□□□□ -1.64
ZC3H4Q9UPT8 AC108022.1-201ENST00000493466 478 ntBASIC4.8□□□□□ -1.64
ZC3H4Q9UPT8 RN7SKP83-201ENST00000516512 178 ntBASIC4.8□□□□□ -1.64
ZC3H4Q9UPT8 AC025946.2-201ENST00000603398 234 ntBASIC4.8□□□□□ -1.64
ZC3H4Q9UPT8 AC091167.4-201ENST00000605079 184 ntBASIC4.8□□□□□ -1.64
ZC3H4Q9UPT8 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.8□□□□□ -1.64
ZC3H4Q9UPT8 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC4.8□□□□□ -1.64
ZC3H4Q9UPT8 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ZC3H4Q9UPT8 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.8□□□□□ -1.64
ZC3H4Q9UPT8 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.8□□□□□ -1.64
ZC3H4Q9UPT8 RNU6-275P-201ENST00000364910 107 ntBASIC4.79□□□□□ -1.64
ZC3H4Q9UPT8 RNU6-245P-201ENST00000384020 107 ntBASIC4.79□□□□□ -1.64
ZC3H4Q9UPT8 RNU6-763P-201ENST00000390865 106 ntBASIC4.79□□□□□ -1.64
ZC3H4Q9UPT8 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.79□□□□□ -1.64
ZC3H4Q9UPT8 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.79□□□□□ -1.64
ZC3H4Q9UPT8 AC006517.1-201ENST00000480485 328 ntBASIC4.79□□□□□ -1.64
ZC3H4Q9UPT8 SNORA25.12-201ENST00000516202 82 ntBASIC4.79□□□□□ -1.64
ZC3H4Q9UPT8 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.79□□□□□ -1.64
ZC3H4Q9UPT8 AP002001.1-203ENST00000534002 267 ntBASIC4.79□□□□□ -1.64
ZC3H4Q9UPT8 MIR548X2-201ENST00000579776 100 ntBASIC4.79□□□□□ -1.64
ZC3H4Q9UPT8 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.79□□□□□ -1.64
ZC3H4Q9UPT8 AC090897.2-201ENST00000581715 130 ntBASIC4.79□□□□□ -1.64
ZC3H4Q9UPT8 AL136164.4-201ENST00000625013 2135 ntBASIC4.79□□□□□ -1.64
ZC3H4Q9UPT8 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 187 ms