Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 ZNF658B-202ENST00000615961 3375 ntBASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SCAF8Q9UPN6 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 RNU5E-7P-201ENST00000365290 117 ntBASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 Y_RNA.364-201ENST00000365532 101 ntBASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 RNU6-19P-201ENST00000384718 107 ntBASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 RPL21P75-201ENST00000396599 483 ntBASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 RPL21P28-201ENST00000401418 483 ntBASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 RNU6-985P-201ENST00000410182 104 ntBASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 Y_RNA.605-201ENST00000410577 105 ntBASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 AC243428.1-201ENST00000421099 264 ntBASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 PTGES3P4-201ENST00000426243 356 ntBASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 AC244505.4-201ENST00000434905 287 ntBASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 SSXP5-201ENST00000443473 287 ntBASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 OSTCP8-201ENST00000445117 448 ntBASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 RPL21P39-201ENST00000463605 483 ntBASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 AC087190.1-201ENST00000484462 480 ntBASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 AC093591.1-201ENST00000491435 481 ntBASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 AC018437.1-201ENST00000492214 406 ntBASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 RPL21P16-201ENST00000495531 483 ntBASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 VN1R107P-201ENST00000601784 209 ntBASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 AC123912.5-201ENST00000605470 343 ntBASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 AC006157.1-201ENST00000611750 366 ntBASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 MIR3529-201ENST00000637713 78 ntBASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
SCAF8Q9UPN6 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
SCAF8Q9UPN6 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.17□□□□□ -1.9
SCAF8Q9UPN6 RNU6-942P-201ENST00000363002 107 ntBASIC3.17□□□□□ -1.9
SCAF8Q9UPN6 SNORA46-201ENST00000384762 135 ntBASIC3.17□□□□□ -1.9
SCAF8Q9UPN6 MIR504-201ENST00000385065 83 ntBASIC3.17□□□□□ -1.9
SCAF8Q9UPN6 AL030996.1-201ENST00000411430 235 ntBASIC3.17□□□□□ -1.9
SCAF8Q9UPN6 SNORD56-201ENST00000413522 71 ntBASIC3.17□□□□□ -1.9
SCAF8Q9UPN6 AC008267.5-201ENST00000424928 265 ntBASIC3.17□□□□□ -1.9
SCAF8Q9UPN6 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.17□□□□□ -1.9
SCAF8Q9UPN6 GSTA11P-201ENST00000452866 669 ntBASIC3.17□□□□□ -1.9
SCAF8Q9UPN6 PCMTD1P1-201ENST00000455560 355 ntBASIC3.17□□□□□ -1.9
SCAF8Q9UPN6 snoU13.15-201ENST00000459407 104 ntBASIC3.17□□□□□ -1.9
SCAF8Q9UPN6 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.17□□□□□ -1.9
SCAF8Q9UPN6 RNA5SP320-201ENST00000516263 124 ntBASIC3.17□□□□□ -1.9
SCAF8Q9UPN6 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.17□□□□□ -1.9
SCAF8Q9UPN6 AL117187.1-201ENST00000555482 181 ntBASIC3.17□□□□□ -1.9
SCAF8Q9UPN6 AL355877.2-201ENST00000603670 358 ntBASIC3.17□□□□□ -1.9
SCAF8Q9UPN6 AC091152.3-201ENST00000604227 325 ntBASIC3.17□□□□□ -1.9
SCAF8Q9UPN6 7SK.10-201ENST00000621414 298 ntBASIC3.17□□□□□ -1.9
SCAF8Q9UPN6 U4.7-201ENST00000638126 106 ntBASIC3.17□□□□□ -1.9
SCAF8Q9UPN6 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.17□□□□□ -1.9
SCAF8Q9UPN6 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.16□□□□□ -1.9
SCAF8Q9UPN6 RNU6-487P-201ENST00000365430 104 ntBASIC3.16□□□□□ -1.9
SCAF8Q9UPN6 RNU6-574P-201ENST00000384265 107 ntBASIC3.16□□□□□ -1.9
SCAF8Q9UPN6 MIR764-201ENST00000390811 85 ntBASIC3.16□□□□□ -1.9
SCAF8Q9UPN6 MIR1289-2-201ENST00000408360 111 ntBASIC3.16□□□□□ -1.9
SCAF8Q9UPN6 RNU2-49P-201ENST00000410666 184 ntBASIC3.16□□□□□ -1.9
SCAF8Q9UPN6 AL133396.1-201ENST00000432048 687 ntBASIC3.16□□□□□ -1.9
SCAF8Q9UPN6 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.16□□□□□ -1.9
SCAF8Q9UPN6 RPL23AP50-201ENST00000434149 455 ntBASIC3.16□□□□□ -1.9
SCAF8Q9UPN6 AC124916.1-201ENST00000444020 547 ntBASIC3.16□□□□□ -1.9
SCAF8Q9UPN6 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.16□□□□□ -1.9
SCAF8Q9UPN6 AC013470.1-201ENST00000453438 462 ntBASIC3.16□□□□□ -1.9
SCAF8Q9UPN6 snoU109.2-201ENST00000459316 135 ntBASIC3.16□□□□□ -1.9
SCAF8Q9UPN6 RNU5B-3P-201ENST00000516601 115 ntBASIC3.16□□□□□ -1.9
SCAF8Q9UPN6 SNORA43.2-201ENST00000516652 128 ntBASIC3.16□□□□□ -1.9
SCAF8Q9UPN6 RNU6-307P-201ENST00000516743 106 ntBASIC3.16□□□□□ -1.9
SCAF8Q9UPN6 ACA59.2-201ENST00000517061 156 ntBASIC3.16□□□□□ -1.9
SCAF8Q9UPN6 AC010186.2-204ENST00000537668 439 ntBASIC3.16□□□□□ -1.9
SCAF8Q9UPN6 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.16□□□□□ -1.9
SCAF8Q9UPN6 AC109446.1-201ENST00000566172 220 ntBASIC3.16□□□□□ -1.9
SCAF8Q9UPN6 AC009163.5-201ENST00000575421 637 ntBASIC3.16□□□□□ -1.9
SCAF8Q9UPN6 AC005899.2-201ENST00000584353 90 ntBASIC3.16□□□□□ -1.9
SCAF8Q9UPN6 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.16□□□□□ -1.9
SCAF8Q9UPN6 AC005014.2-201ENST00000607795 599 ntBASIC3.16□□□□□ -1.9
SCAF8Q9UPN6 uc_338.14-201ENST00000613162 166 ntBASIC3.16□□□□□ -1.9
SCAF8Q9UPN6 AL132822.1-201ENST00000617063 513 ntBASIC3.16□□□□□ -1.9
SCAF8Q9UPN6 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.16□□□□□ -1.9
SCAF8Q9UPN6 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
SCAF8Q9UPN6 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.15□□□□□ -1.9
SCAF8Q9UPN6 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.15□□□□□ -1.9
SCAF8Q9UPN6 RNU6-37P-201ENST00000362692 107 ntBASIC3.15□□□□□ -1.91
SCAF8Q9UPN6 RNU6-11P-201ENST00000364234 107 ntBASIC3.15□□□□□ -1.91
SCAF8Q9UPN6 RNU6-25P-201ENST00000383873 107 ntBASIC3.15□□□□□ -1.91
SCAF8Q9UPN6 RNU6-1-201ENST00000383898 107 ntBASIC3.15□□□□□ -1.91
SCAF8Q9UPN6 RNU6-48P-201ENST00000384161 107 ntBASIC3.15□□□□□ -1.91
SCAF8Q9UPN6 RNU6-36P-201ENST00000384172 107 ntBASIC3.15□□□□□ -1.91
SCAF8Q9UPN6 RNU6-4P-201ENST00000384205 107 ntBASIC3.15□□□□□ -1.91
SCAF8Q9UPN6 RNU6-5P-201ENST00000384238 107 ntBASIC3.15□□□□□ -1.91
SCAF8Q9UPN6 RNU6-3P-201ENST00000384314 107 ntBASIC3.15□□□□□ -1.91
SCAF8Q9UPN6 RNU6-16P-201ENST00000384385 107 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms