Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 MIR1302-2-201ENST00000607096 138 ntBASIC2.6□□□□□ -1.99
SIX4Q9UIU6 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.6□□□□□ -1.99
SIX4Q9UIU6 IGHVIII-44-202ENST00000636235 289 ntBASIC2.6□□□□□ -1.99
SIX4Q9UIU6 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SIX4Q9UIU6 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.6□□□□□ -1.99
SIX4Q9UIU6 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SIX4Q9UIU6 MTND5P10-201ENST00000603719 1809 ntBASIC2.59□□□□□ -1.99
SIX4Q9UIU6 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SIX4Q9UIU6 SNORD56.1-201ENST00000362913 68 ntBASIC2.59□□□□□ -1.99
SIX4Q9UIU6 RNU1-105P-201ENST00000363470 161 ntBASIC2.59□□□□□ -1.99
SIX4Q9UIU6 RNU6-1180P-201ENST00000364935 107 ntBASIC2.59□□□□□ -1.99
SIX4Q9UIU6 RNU6-474P-201ENST00000384243 107 ntBASIC2.59□□□□□ -1.99
SIX4Q9UIU6 SNORA75.6-201ENST00000391318 127 ntBASIC2.59□□□□□ -1.99
SIX4Q9UIU6 RNU6-174P-201ENST00000410406 106 ntBASIC2.59□□□□□ -1.99
SIX4Q9UIU6 BX276092.3-201ENST00000424182 230 ntBASIC2.59□□□□□ -1.99
SIX4Q9UIU6 AL365496.1-201ENST00000426885 215 ntBASIC2.59□□□□□ -1.99
SIX4Q9UIU6 AC005534.2-201ENST00000431047 433 ntBASIC2.59□□□□□ -1.99
SIX4Q9UIU6 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.59□□□□□ -1.99
SIX4Q9UIU6 RPS27AP9-201ENST00000477681 438 ntBASIC2.59□□□□□ -1.99
SIX4Q9UIU6 RN7SL499P-201ENST00000481141 276 ntBASIC2.59□□□□□ -1.99
SIX4Q9UIU6 AC234781.5-201ENST00000508429 271 ntBASIC2.59□□□□□ -1.99
SIX4Q9UIU6 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.59□□□□□ -1.99
SIX4Q9UIU6 AC026436.1-201ENST00000510537 270 ntBASIC2.59□□□□□ -1.99
SIX4Q9UIU6 ACA59.1-201ENST00000515966 143 ntBASIC2.59□□□□□ -1.99
SIX4Q9UIU6 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.59□□□□□ -1.99
SIX4Q9UIU6 RNU6-826P-201ENST00000516827 104 ntBASIC2.59□□□□□ -1.99
SIX4Q9UIU6 AP005902.1-201ENST00000521358 186 ntBASIC2.59□□□□□ -1.99
SIX4Q9UIU6 CR383656.8-201ENST00000549046 145 ntBASIC2.59□□□□□ -1.99
SIX4Q9UIU6 AC020661.2-201ENST00000560114 134 ntBASIC2.59□□□□□ -1.99
SIX4Q9UIU6 AC009163.5-201ENST00000575421 637 ntBASIC2.59□□□□□ -1.99
SIX4Q9UIU6 AC091152.3-201ENST00000604227 325 ntBASIC2.59□□□□□ -1.99
SIX4Q9UIU6 AC046143.2-201ENST00000609789 160 ntBASIC2.59□□□□□ -1.99
SIX4Q9UIU6 AC133104.2-201ENST00000615272 193 ntBASIC2.59□□□□□ -1.99
SIX4Q9UIU6 MIR1291-201ENST00000627649 87 ntBASIC2.59□□□□□ -1.99
SIX4Q9UIU6 AC241585.2-209ENST00000638217 143 ntBASIC2.59□□□□□ -1.99
SIX4Q9UIU6 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.59□□□□□ -2
SIX4Q9UIU6 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
SIX4Q9UIU6 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.58□□□□□ -2
SIX4Q9UIU6 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.58□□□□□ -2
SIX4Q9UIU6 Y_RNA.48-201ENST00000362710 103 ntBASIC2.58□□□□□ -2
SIX4Q9UIU6 RNU6-1040P-201ENST00000383974 107 ntBASIC2.58□□□□□ -2
SIX4Q9UIU6 AC074117.2-201ENST00000417130 397 ntBASIC2.58□□□□□ -2
SIX4Q9UIU6 AC243428.1-201ENST00000421099 264 ntBASIC2.58□□□□□ -2
SIX4Q9UIU6 AL591043.1-201ENST00000432461 424 ntBASIC2.58□□□□□ -2
SIX4Q9UIU6 AC243964.1-201ENST00000441814 261 ntBASIC2.58□□□□□ -2
SIX4Q9UIU6 RPL39P40-201ENST00000445481 146 ntBASIC2.58□□□□□ -2
SIX4Q9UIU6 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.58□□□□□ -2
SIX4Q9UIU6 RN7SL636P-201ENST00000497504 294 ntBASIC2.58□□□□□ -2
SIX4Q9UIU6 RPPH1-2P-201ENST00000516688 293 ntBASIC2.58□□□□□ -2
SIX4Q9UIU6 SNORA31.23-201ENST00000517219 133 ntBASIC2.58□□□□□ -2
SIX4Q9UIU6 AP003072.1-201ENST00000531740 145 ntBASIC2.58□□□□□ -2
SIX4Q9UIU6 AC010186.2-204ENST00000537668 439 ntBASIC2.58□□□□□ -2
SIX4Q9UIU6 AL158827.2-201ENST00000602494 330 ntBASIC2.58□□□□□ -2
SIX4Q9UIU6 AC018889.1-201ENST00000605372 397 ntBASIC2.58□□□□□ -2
SIX4Q9UIU6 AC067747.1-201ENST00000608026 250 ntBASIC2.58□□□□□ -2
SIX4Q9UIU6 MIR8076-201ENST00000611401 83 ntBASIC2.58□□□□□ -2
SIX4Q9UIU6 AL691447.3-201ENST00000635020 330 ntBASIC2.58□□□□□ -2
SIX4Q9UIU6 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SIX4Q9UIU6 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.58□□□□□ -2
SIX4Q9UIU6 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.57□□□□□ -2
SIX4Q9UIU6 AC010889.1-201ENST00000566193 2666 ntBASIC2.57□□□□□ -2
SIX4Q9UIU6 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
SIX4Q9UIU6 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
SIX4Q9UIU6 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.57□□□□□ -2
SIX4Q9UIU6 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
SIX4Q9UIU6 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
SIX4Q9UIU6 MIR21-201ENST00000362134 72 ntBASIC2.57□□□□□ -2
SIX4Q9UIU6 RNU6-1115P-201ENST00000362490 106 ntBASIC2.57□□□□□ -2
SIX4Q9UIU6 Y_RNA.197-201ENST00000364004 102 ntBASIC2.57□□□□□ -2
SIX4Q9UIU6 Y_RNA.216-201ENST00000364205 93 ntBASIC2.57□□□□□ -2
SIX4Q9UIU6 RNU6-596P-201ENST00000365395 98 ntBASIC2.57□□□□□ -2
SIX4Q9UIU6 SNORA41-201ENST00000384675 132 ntBASIC2.57□□□□□ -2
SIX4Q9UIU6 MIR627-201ENST00000384979 97 ntBASIC2.57□□□□□ -2
SIX4Q9UIU6 MIR559-201ENST00000385188 96 ntBASIC2.57□□□□□ -2
SIX4Q9UIU6 RNU6-750P-201ENST00000390946 107 ntBASIC2.57□□□□□ -2
SIX4Q9UIU6 RNU6-308P-201ENST00000390957 107 ntBASIC2.57□□□□□ -2
SIX4Q9UIU6 MIR548P-201ENST00000408336 84 ntBASIC2.57□□□□□ -2
SIX4Q9UIU6 HMGN2P35-201ENST00000412164 270 ntBASIC2.57□□□□□ -2
SIX4Q9UIU6 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.57□□□□□ -2
SIX4Q9UIU6 RPS12P2-201ENST00000439728 269 ntBASIC2.57□□□□□ -2
SIX4Q9UIU6 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.57□□□□□ -2
SIX4Q9UIU6 AC007969.2-201ENST00000441891 191 ntBASIC2.57□□□□□ -2
SIX4Q9UIU6 AC104389.3-201ENST00000445629 235 ntBASIC2.57□□□□□ -2
SIX4Q9UIU6 AP001025.1-201ENST00000486139 332 ntBASIC2.57□□□□□ -2
SIX4Q9UIU6 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.57□□□□□ -2
SIX4Q9UIU6 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.57□□□□□ -2
SIX4Q9UIU6 CBX3P8-201ENST00000532412 525 ntBASIC2.57□□□□□ -2
SIX4Q9UIU6 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.57□□□□□ -2
SIX4Q9UIU6 BNIP3P16-201ENST00000589779 534 ntBASIC2.57□□□□□ -2
SIX4Q9UIU6 AC008739.2-201ENST00000597006 317 ntBASIC2.57□□□□□ -2
SIX4Q9UIU6 AC078795.3-201ENST00000602913 472 ntBASIC2.57□□□□□ -2
SIX4Q9UIU6 AP001836.1-201ENST00000604675 523 ntBASIC2.57□□□□□ -2
SIX4Q9UIU6 HMGB1P24-202ENST00000615653 685 ntBASIC2.57□□□□□ -2
SIX4Q9UIU6 AC134503.1-201ENST00000633048 54 ntBASIC2.57□□□□□ -2
SIX4Q9UIU6 AC004944.1-201ENST00000517807 3059 ntBASIC2.57□□□□□ -2
SIX4Q9UIU6 RBBP8P1-201ENST00000449447 1844 ntBASIC2.56□□□□□ -2
SIX4Q9UIU6 Y_RNA.31-201ENST00000362574 102 ntBASIC2.56□□□□□ -2
SIX4Q9UIU6 RNU6-227P-201ENST00000362865 103 ntBASIC2.56□□□□□ -2
SIX4Q9UIU6 Y_RNA.395-201ENST00000383945 109 ntBASIC2.56□□□□□ -2
SIX4Q9UIU6 Y_RNA.445-201ENST00000384168 102 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms