Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 AC010401.1-201ENST00000463867 348 ntBASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 AP000870.1-201ENST00000472927 406 ntBASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 AC107222.1-201ENST00000510899 637 ntBASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 RNU6-567P-201ENST00000516746 107 ntBASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 AP000867.2-201ENST00000532468 320 ntBASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 AC027288.2-201ENST00000553028 243 ntBASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 MIR4429-201ENST00000580105 73 ntBASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 MIR3128-201ENST00000581957 66 ntBASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 AC008739.3-201ENST00000603262 127 ntBASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PPARGC1AQ9UBK2 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PPARGC1AQ9UBK2 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
PPARGC1AQ9UBK2 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
PPARGC1AQ9UBK2 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.57□□□□□ -1.84
PPARGC1AQ9UBK2 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.57□□□□□ -1.84
PPARGC1AQ9UBK2 CD24P4-201ENST00000382840 243 ntBASIC3.57□□□□□ -1.84
PPARGC1AQ9UBK2 SNORD17-201ENST00000390930 237 ntBASIC3.57□□□□□ -1.84
PPARGC1AQ9UBK2 RNA5SP252-201ENST00000391131 119 ntBASIC3.57□□□□□ -1.84
PPARGC1AQ9UBK2 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.57□□□□□ -1.84
PPARGC1AQ9UBK2 UBA52P6-201ENST00000399822 382 ntBASIC3.57□□□□□ -1.84
PPARGC1AQ9UBK2 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.57□□□□□ -1.84
PPARGC1AQ9UBK2 AL358075.3-201ENST00000426289 226 ntBASIC3.57□□□□□ -1.84
PPARGC1AQ9UBK2 RPS15AP5-201ENST00000436276 388 ntBASIC3.57□□□□□ -1.84
PPARGC1AQ9UBK2 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3.57□□□□□ -1.84
PPARGC1AQ9UBK2 RPL39P29-201ENST00000447779 157 ntBASIC3.57□□□□□ -1.84
PPARGC1AQ9UBK2 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PPARGC1AQ9UBK2 Y_RNA.680-201ENST00000516441 93 ntBASIC3.57□□□□□ -1.84
PPARGC1AQ9UBK2 RNU5B-3P-201ENST00000516601 115 ntBASIC3.57□□□□□ -1.84
PPARGC1AQ9UBK2 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.57□□□□□ -1.84
PPARGC1AQ9UBK2 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.57□□□□□ -1.84
PPARGC1AQ9UBK2 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.57□□□□□ -1.84
PPARGC1AQ9UBK2 MIR6075-201ENST00000620782 95 ntBASIC3.57□□□□□ -1.84
PPARGC1AQ9UBK2 MIR7153-201ENST00000637758 57 ntBASIC3.57□□□□□ -1.84
PPARGC1AQ9UBK2 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PPARGC1AQ9UBK2 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PPARGC1AQ9UBK2 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.57□□□□□ -1.84
PPARGC1AQ9UBK2 RBBP8P1-201ENST00000449447 1844 ntBASIC3.56□□□□□ -1.84
PPARGC1AQ9UBK2 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PPARGC1AQ9UBK2 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PPARGC1AQ9UBK2 Y_RNA.20-201ENST00000362479 113 ntBASIC3.56□□□□□ -1.84
PPARGC1AQ9UBK2 RNA5SP139-201ENST00000364340 117 ntBASIC3.56□□□□□ -1.84
PPARGC1AQ9UBK2 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.56□□□□□ -1.84
PPARGC1AQ9UBK2 RNU6-198P-201ENST00000384258 104 ntBASIC3.56□□□□□ -1.84
PPARGC1AQ9UBK2 SNORD63-201ENST00000384262 68 ntBASIC3.56□□□□□ -1.84
PPARGC1AQ9UBK2 Y_RNA.515-201ENST00000384535 112 ntBASIC3.56□□□□□ -1.84
PPARGC1AQ9UBK2 Y_RNA.581-201ENST00000391017 97 ntBASIC3.56□□□□□ -1.84
PPARGC1AQ9UBK2 AC096649.2-201ENST00000416186 393 ntBASIC3.56□□□□□ -1.84
PPARGC1AQ9UBK2 AC004383.1-201ENST00000438135 289 ntBASIC3.56□□□□□ -1.84
PPARGC1AQ9UBK2 AC010099.1-201ENST00000455434 375 ntBASIC3.56□□□□□ -1.84
PPARGC1AQ9UBK2 AL441985.1-201ENST00000457727 251 ntBASIC3.56□□□□□ -1.84
PPARGC1AQ9UBK2 RN7SKP49-201ENST00000516675 260 ntBASIC3.56□□□□□ -1.84
PPARGC1AQ9UBK2 SNORA70.19-201ENST00000516717 90 ntBASIC3.56□□□□□ -1.84
PPARGC1AQ9UBK2 RNA5SP54-201ENST00000516951 92 ntBASIC3.56□□□□□ -1.84
PPARGC1AQ9UBK2 AC136932.1-201ENST00000574771 208 ntBASIC3.56□□□□□ -1.84
PPARGC1AQ9UBK2 MIR4659A-201ENST00000580269 81 ntBASIC3.56□□□□□ -1.84
PPARGC1AQ9UBK2 AP001282.2-201ENST00000616149 309 ntBASIC3.56□□□□□ -1.84
PPARGC1AQ9UBK2 AC078938.1-201ENST00000620993 318 ntBASIC3.56□□□□□ -1.84
PPARGC1AQ9UBK2 AL450472.1-202ENST00000637286 180 ntBASIC3.56□□□□□ -1.84
PPARGC1AQ9UBK2 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.56□□□□□ -1.84
PPARGC1AQ9UBK2 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.56□□□□□ -1.84
PPARGC1AQ9UBK2 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PPARGC1AQ9UBK2 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
PPARGC1AQ9UBK2 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
PPARGC1AQ9UBK2 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PPARGC1AQ9UBK2 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PPARGC1AQ9UBK2 RNU4-35P-201ENST00000362588 141 ntBASIC3.55□□□□□ -1.84
PPARGC1AQ9UBK2 Y_RNA.60-201ENST00000362831 98 ntBASIC3.55□□□□□ -1.84
PPARGC1AQ9UBK2 Y_RNA.462-201ENST00000384268 102 ntBASIC3.55□□□□□ -1.84
PPARGC1AQ9UBK2 MT-TR-201ENST00000387439 65 ntBASIC3.55□□□□□ -1.84
PPARGC1AQ9UBK2 RNU6-159P-201ENST00000391080 106 ntBASIC3.55□□□□□ -1.84
PPARGC1AQ9UBK2 AL079342.1-201ENST00000401460 267 ntBASIC3.55□□□□□ -1.84
PPARGC1AQ9UBK2 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.55□□□□□ -1.84
PPARGC1AQ9UBK2 AC107626.1-201ENST00000471084 183 ntBASIC3.55□□□□□ -1.84
PPARGC1AQ9UBK2 RN7SL293P-201ENST00000481765 281 ntBASIC3.55□□□□□ -1.84
PPARGC1AQ9UBK2 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.55□□□□□ -1.84
PPARGC1AQ9UBK2 MTND1P19-201ENST00000511780 315 ntBASIC3.55□□□□□ -1.84
PPARGC1AQ9UBK2 AC074050.1-201ENST00000563247 211 ntBASIC3.55□□□□□ -1.84
PPARGC1AQ9UBK2 MIR3136-201ENST00000583498 78 ntBASIC3.55□□□□□ -1.84
PPARGC1AQ9UBK2 AL359198.2-201ENST00000611836 194 ntBASIC3.55□□□□□ -1.84
PPARGC1AQ9UBK2 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PPARGC1AQ9UBK2 AL391987.6-201ENST00000305671 199 ntBASIC3.54□□□□□ -1.84
PPARGC1AQ9UBK2 SNORA71.3-201ENST00000362582 128 ntBASIC3.54□□□□□ -1.84
PPARGC1AQ9UBK2 snoU2_19.2-201ENST00000363024 80 ntBASIC3.54□□□□□ -1.84
PPARGC1AQ9UBK2 RNU6-799P-201ENST00000363567 107 ntBASIC3.54□□□□□ -1.84
PPARGC1AQ9UBK2 RNU6-280P-201ENST00000364145 104 ntBASIC3.54□□□□□ -1.84
PPARGC1AQ9UBK2 RNU6-879P-201ENST00000364328 108 ntBASIC3.54□□□□□ -1.84
PPARGC1AQ9UBK2 Y_RNA.416-201ENST00000384014 113 ntBASIC3.54□□□□□ -1.84
PPARGC1AQ9UBK2 RNU6-318P-201ENST00000384283 103 ntBASIC3.54□□□□□ -1.84
PPARGC1AQ9UBK2 RNU6-19P-201ENST00000384718 107 ntBASIC3.54□□□□□ -1.84
PPARGC1AQ9UBK2 MIR10B-201ENST00000385011 110 ntBASIC3.54□□□□□ -1.84
PPARGC1AQ9UBK2 AC023141.4-201ENST00000412031 328 ntBASIC3.54□□□□□ -1.84
PPARGC1AQ9UBK2 MTND4LP30-201ENST00000454092 297 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms