Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 RNU6-438P-201ENST00000365561 103 ntBASIC0.24□□□□□ -2.37
COMMD3Q9UBI1 RPS3AP36-201ENST00000398190 775 ntBASIC0.24□□□□□ -2.37
COMMD3Q9UBI1 MTCYBP2-201ENST00000407745 171 ntBASIC0.24□□□□□ -2.37
COMMD3Q9UBI1 MTCO2P1-201ENST00000424648 477 ntBASIC0.24□□□□□ -2.37
COMMD3Q9UBI1 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.24□□□□□ -2.37
COMMD3Q9UBI1 RPL23AP95-201ENST00000426806 265 ntBASIC0.24□□□□□ -2.37
COMMD3Q9UBI1 GAPDHP17-201ENST00000449858 1001 ntBASIC0.24□□□□□ -2.37
COMMD3Q9UBI1 MTCYBP1-201ENST00000454315 1119 ntBASIC0.24□□□□□ -2.37
COMMD3Q9UBI1 MTCO3P9-201ENST00000506989 781 ntBASIC0.24□□□□□ -2.37
COMMD3Q9UBI1 RNU6-856P-201ENST00000516959 98 ntBASIC0.24□□□□□ -2.37
COMMD3Q9UBI1 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.24□□□□□ -2.37
COMMD3Q9UBI1 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.24□□□□□ -2.37
COMMD3Q9UBI1 APOOP3-201ENST00000536787 586 ntBASIC0.24□□□□□ -2.37
COMMD3Q9UBI1 AL512605.2-201ENST00000592972 256 ntBASIC0.24□□□□□ -2.37
COMMD3Q9UBI1 MIR8070-201ENST00000616510 88 ntBASIC0.24□□□□□ -2.37
COMMD3Q9UBI1 AC126177.8-201ENST00000618339 1015 ntBASIC0.24□□□□□ -2.37
COMMD3Q9UBI1 RMST_7.1-201ENST00000621935 268 ntBASIC0.24□□□□□ -2.37
COMMD3Q9UBI1 SNORD31B-201ENST00000364977 69 ntBASIC0.23□□□□□ -2.37
COMMD3Q9UBI1 SNORA72.2-201ENST00000365028 127 ntBASIC0.23□□□□□ -2.37
COMMD3Q9UBI1 RNU6-142P-201ENST00000384019 107 ntBASIC0.23□□□□□ -2.37
COMMD3Q9UBI1 SNORA80D-201ENST00000384488 135 ntBASIC0.23□□□□□ -2.37
COMMD3Q9UBI1 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.23□□□□□ -2.37
COMMD3Q9UBI1 AC007395.1-201ENST00000451333 677 ntBASIC0.23□□□□□ -2.37
COMMD3Q9UBI1 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.23□□□□□ -2.37
COMMD3Q9UBI1 RNU7-34P-201ENST00000459394 64 ntBASIC0.23□□□□□ -2.37
COMMD3Q9UBI1 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.23□□□□□ -2.37
COMMD3Q9UBI1 RNU6-751P-201ENST00000516382 101 ntBASIC0.23□□□□□ -2.37
COMMD3Q9UBI1 AP001893.2-201ENST00000526949 202 ntBASIC0.23□□□□□ -2.37
COMMD3Q9UBI1 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.23□□□□□ -2.37
COMMD3Q9UBI1 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.23□□□□□ -2.37
COMMD3Q9UBI1 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.23□□□□□ -2.37
COMMD3Q9UBI1 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.23□□□□□ -2.37
COMMD3Q9UBI1 MIR3136-201ENST00000583498 78 ntBASIC0.23□□□□□ -2.37
COMMD3Q9UBI1 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.23□□□□□ -2.37
COMMD3Q9UBI1 AC099785.1-201ENST00000605697 437 ntBASIC0.23□□□□□ -2.37
COMMD3Q9UBI1 AC008147.4-201ENST00000617570 1204 ntBASIC0.23□□□□□ -2.37
COMMD3Q9UBI1 AC243829.3-201ENST00000622177 108 ntBASIC0.23□□□□□ -2.37
COMMD3Q9UBI1 FRG1KP-201ENST00000623592 341 ntBASIC0.23□□□□□ -2.37
COMMD3Q9UBI1 SNORD3E-202ENST00000627253 216 ntBASIC0.23□□□□□ -2.37
COMMD3Q9UBI1 RNU6-384P-201ENST00000364900 104 ntBASIC0.22□□□□□ -2.37
COMMD3Q9UBI1 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.22□□□□□ -2.37
COMMD3Q9UBI1 AC011233.1-201ENST00000422812 283 ntBASIC0.22□□□□□ -2.37
COMMD3Q9UBI1 MTCO2P12-201ENST00000427426 682 ntBASIC0.22□□□□□ -2.37
COMMD3Q9UBI1 AL035398.1-201ENST00000430869 322 ntBASIC0.22□□□□□ -2.37
COMMD3Q9UBI1 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.22□□□□□ -2.37
COMMD3Q9UBI1 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.22□□□□□ -2.37
COMMD3Q9UBI1 AC092991.1-201ENST00000477176 376 ntBASIC0.22□□□□□ -2.37
COMMD3Q9UBI1 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.22□□□□□ -2.37
COMMD3Q9UBI1 AC091435.1-201ENST00000505442 584 ntBASIC0.22□□□□□ -2.37
COMMD3Q9UBI1 AC067942.3-201ENST00000512025 362 ntBASIC0.22□□□□□ -2.37
COMMD3Q9UBI1 MTND3P5-201ENST00000512798 333 ntBASIC0.22□□□□□ -2.37
COMMD3Q9UBI1 RNA5SP216-201ENST00000516111 123 ntBASIC0.22□□□□□ -2.37
COMMD3Q9UBI1 SUMO2P16-201ENST00000519475 264 ntBASIC0.22□□□□□ -2.37
COMMD3Q9UBI1 OR8K2P-201ENST00000524645 927 ntBASIC0.22□□□□□ -2.37
COMMD3Q9UBI1 SNORA59B-202ENST00000578183 701 ntBASIC0.22□□□□□ -2.37
COMMD3Q9UBI1 AL513534.2-201ENST00000603836 250 ntBASIC0.22□□□□□ -2.37
COMMD3Q9UBI1 CTHRC1P1-201ENST00000605383 469 ntBASIC0.22□□□□□ -2.37
COMMD3Q9UBI1 AC006270.3-201ENST00000605967 1036 ntBASIC0.22□□□□□ -2.37
COMMD3Q9UBI1 AC243829.6-201ENST00000612652 106 ntBASIC0.22□□□□□ -2.37
COMMD3Q9UBI1 AC092104.1-201ENST00000497346 1441 ntBASIC0.21□□□□□ -2.38
COMMD3Q9UBI1 RNU6-78P-201ENST00000362897 107 ntBASIC0.21□□□□□ -2.38
COMMD3Q9UBI1 RNU6-511P-201ENST00000363496 107 ntBASIC0.21□□□□□ -2.38
COMMD3Q9UBI1 RNU5B-4P-201ENST00000363508 111 ntBASIC0.21□□□□□ -2.38
COMMD3Q9UBI1 RNU6-946P-201ENST00000383878 107 ntBASIC0.21□□□□□ -2.38
COMMD3Q9UBI1 RNU6-348P-201ENST00000384386 107 ntBASIC0.21□□□□□ -2.38
COMMD3Q9UBI1 AL603865.2-201ENST00000401679 213 ntBASIC0.21□□□□□ -2.38
COMMD3Q9UBI1 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.21□□□□□ -2.38
COMMD3Q9UBI1 MIR320C1-201ENST00000408566 88 ntBASIC0.21□□□□□ -2.38
COMMD3Q9UBI1 RNU4-22P-201ENST00000411058 166 ntBASIC0.21□□□□□ -2.38
COMMD3Q9UBI1 ZNF736P7Y-201ENST00000425158 820 ntBASIC0.21□□□□□ -2.38
COMMD3Q9UBI1 USP9YP11-201ENST00000427537 717 ntBASIC0.21□□□□□ -2.38
COMMD3Q9UBI1 AC092423.1-201ENST00000430165 186 ntBASIC0.21□□□□□ -2.38
COMMD3Q9UBI1 AL162395.1-201ENST00000457882 422 ntBASIC0.21□□□□□ -2.38
COMMD3Q9UBI1 Y_RNA.638-201ENST00000459374 113 ntBASIC0.21□□□□□ -2.38
COMMD3Q9UBI1 RPS26P48-201ENST00000491713 339 ntBASIC0.21□□□□□ -2.38
COMMD3Q9UBI1 AC113410.1-201ENST00000505029 247 ntBASIC0.21□□□□□ -2.38
COMMD3Q9UBI1 RNA5SP134-201ENST00000516492 96 ntBASIC0.21□□□□□ -2.38
COMMD3Q9UBI1 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.21□□□□□ -2.38
COMMD3Q9UBI1 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.21□□□□□ -2.38
COMMD3Q9UBI1 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.21□□□□□ -2.38
COMMD3Q9UBI1 MIR5695-201ENST00000579717 85 ntBASIC0.21□□□□□ -2.38
COMMD3Q9UBI1 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
COMMD3Q9UBI1 HMGN1P30-201ENST00000589286 268 ntBASIC0.21□□□□□ -2.38
COMMD3Q9UBI1 AP002802.2-201ENST00000605877 235 ntBASIC0.21□□□□□ -2.38
COMMD3Q9UBI1 AC092574.1-201ENST00000609771 420 ntBASIC0.21□□□□□ -2.38
COMMD3Q9UBI1 U6.42-201ENST00000618440 107 ntBASIC0.21□□□□□ -2.38
COMMD3Q9UBI1 AC131159.1-201ENST00000621854 213 ntBASIC0.21□□□□□ -2.38
COMMD3Q9UBI1 MIR6516-201ENST00000630554 81 ntBASIC0.21□□□□□ -2.38
COMMD3Q9UBI1 AC006927.2-201ENST00000639256 389 ntBASIC0.21□□□□□ -2.38
COMMD3Q9UBI1 MTND4P14-201ENST00000435799 1354 ntBASIC0.2□□□□□ -2.38
COMMD3Q9UBI1 RNA5SP432-201ENST00000362480 116 ntBASIC0.2□□□□□ -2.38
COMMD3Q9UBI1 RNU5E-6P-201ENST00000365574 115 ntBASIC0.2□□□□□ -2.38
COMMD3Q9UBI1 RNA5SP201-201ENST00000410316 124 ntBASIC0.2□□□□□ -2.38
COMMD3Q9UBI1 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.2□□□□□ -2.38
COMMD3Q9UBI1 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.2□□□□□ -2.38
COMMD3Q9UBI1 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC0.2□□□□□ -2.38
COMMD3Q9UBI1 TAF9P1-201ENST00000445421 515 ntBASIC0.2□□□□□ -2.38
COMMD3Q9UBI1 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.2□□□□□ -2.38
COMMD3Q9UBI1 TAF9P2-201ENST00000454958 515 ntBASIC0.2□□□□□ -2.38
COMMD3Q9UBI1 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms