Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 MIR181B1-201ENST00000385240 110 ntBASIC3.04□□□□□ -1.92
COL20A1Q9P218 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.04□□□□□ -1.92
COL20A1Q9P218 RNU6-1140P-201ENST00000410517 106 ntBASIC3.04□□□□□ -1.92
COL20A1Q9P218 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.04□□□□□ -1.92
COL20A1Q9P218 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.04□□□□□ -1.92
COL20A1Q9P218 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.04□□□□□ -1.92
COL20A1Q9P218 GPM6BP3-201ENST00000442797 145 ntBASIC3.04□□□□□ -1.92
COL20A1Q9P218 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.04□□□□□ -1.92
COL20A1Q9P218 snoU13.14-201ENST00000459372 104 ntBASIC3.04□□□□□ -1.92
COL20A1Q9P218 AC068781.1-201ENST00000488231 618 ntBASIC3.04□□□□□ -1.92
COL20A1Q9P218 AC022447.4-201ENST00000504053 364 ntBASIC3.04□□□□□ -1.92
COL20A1Q9P218 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.04□□□□□ -1.92
COL20A1Q9P218 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.04□□□□□ -1.92
COL20A1Q9P218 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.04□□□□□ -1.92
COL20A1Q9P218 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.04□□□□□ -1.92
COL20A1Q9P218 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.04□□□□□ -1.92
COL20A1Q9P218 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.04□□□□□ -1.92
COL20A1Q9P218 AC021231.3-201ENST00000558497 370 ntBASIC3.04□□□□□ -1.92
COL20A1Q9P218 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.04□□□□□ -1.92
COL20A1Q9P218 AL159153.1-201ENST00000619688 317 ntBASIC3.04□□□□□ -1.92
COL20A1Q9P218 AC233981.2-201ENST00000611524 1614 ntBASIC3.04□□□□□ -1.92
COL20A1Q9P218 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
COL20A1Q9P218 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
COL20A1Q9P218 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
COL20A1Q9P218 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.03□□□□□ -1.92
COL20A1Q9P218 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
COL20A1Q9P218 RNA5SP68-201ENST00000363885 119 ntBASIC3.03□□□□□ -1.92
COL20A1Q9P218 SNORA68.1-201ENST00000364537 132 ntBASIC3.03□□□□□ -1.92
COL20A1Q9P218 RNU4-56P-201ENST00000364700 142 ntBASIC3.03□□□□□ -1.92
COL20A1Q9P218 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
COL20A1Q9P218 RNU6-1286P-201ENST00000383871 107 ntBASIC3.03□□□□□ -1.92
COL20A1Q9P218 Y_RNA.533-201ENST00000384596 114 ntBASIC3.03□□□□□ -1.92
COL20A1Q9P218 MIR1302-11-201ENST00000408051 138 ntBASIC3.03□□□□□ -1.92
COL20A1Q9P218 MIR1302-9-201ENST00000408365 138 ntBASIC3.03□□□□□ -1.92
COL20A1Q9P218 MIR1302-10-201ENST00000408734 138 ntBASIC3.03□□□□□ -1.92
COL20A1Q9P218 MTCO2P12-201ENST00000427426 682 ntBASIC3.03□□□□□ -1.92
COL20A1Q9P218 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.03□□□□□ -1.92
COL20A1Q9P218 AC007677.1-201ENST00000445757 515 ntBASIC3.03□□□□□ -1.92
COL20A1Q9P218 AC079354.2-201ENST00000453523 154 ntBASIC3.03□□□□□ -1.92
COL20A1Q9P218 Y_RNA.639-201ENST00000458981 102 ntBASIC3.03□□□□□ -1.92
COL20A1Q9P218 RPL17P19-201ENST00000489069 552 ntBASIC3.03□□□□□ -1.92
COL20A1Q9P218 RNA5SP385-201ENST00000515947 110 ntBASIC3.03□□□□□ -1.92
COL20A1Q9P218 RNU6-470P-201ENST00000515954 104 ntBASIC3.03□□□□□ -1.92
COL20A1Q9P218 CBX3P8-201ENST00000532412 525 ntBASIC3.03□□□□□ -1.92
COL20A1Q9P218 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.03□□□□□ -1.92
COL20A1Q9P218 AC027176.1-201ENST00000560204 514 ntBASIC3.03□□□□□ -1.92
COL20A1Q9P218 MIR3605-201ENST00000583214 100 ntBASIC3.03□□□□□ -1.92
COL20A1Q9P218 MIR3136-201ENST00000583498 78 ntBASIC3.03□□□□□ -1.92
COL20A1Q9P218 AC010620.2-201ENST00000600135 313 ntBASIC3.03□□□□□ -1.92
COL20A1Q9P218 AL080274.1-201ENST00000605565 220 ntBASIC3.03□□□□□ -1.92
COL20A1Q9P218 MIR1302-2-201ENST00000607096 138 ntBASIC3.03□□□□□ -1.92
COL20A1Q9P218 MIR6817-201ENST00000615588 66 ntBASIC3.03□□□□□ -1.92
COL20A1Q9P218 MIR7157-201ENST00000635801 60 ntBASIC3.03□□□□□ -1.92
COL20A1Q9P218 MIR7515-201ENST00000637837 67 ntBASIC3.03□□□□□ -1.92
COL20A1Q9P218 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
COL20A1Q9P218 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
COL20A1Q9P218 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
COL20A1Q9P218 RNU6-490P-201ENST00000362985 107 ntBASIC3.02□□□□□ -1.93
COL20A1Q9P218 RNU6-529P-201ENST00000363383 104 ntBASIC3.02□□□□□ -1.93
COL20A1Q9P218 SNORD42.2-201ENST00000365570 69 ntBASIC3.02□□□□□ -1.93
COL20A1Q9P218 MIR186-201ENST00000384988 86 ntBASIC3.02□□□□□ -1.93
COL20A1Q9P218 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.02□□□□□ -1.93
COL20A1Q9P218 AC009963.1-201ENST00000417265 157 ntBASIC3.02□□□□□ -1.93
COL20A1Q9P218 MICF-203ENST00000432679 129 ntBASIC3.02□□□□□ -1.93
COL20A1Q9P218 AC009296.1-201ENST00000443146 155 ntBASIC3.02□□□□□ -1.93
COL20A1Q9P218 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.02□□□□□ -1.93
COL20A1Q9P218 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.02□□□□□ -1.93
COL20A1Q9P218 RN7SKP210-201ENST00000459176 261 ntBASIC3.02□□□□□ -1.93
COL20A1Q9P218 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.02□□□□□ -1.93
COL20A1Q9P218 AIG1P1-201ENST00000503376 148 ntBASIC3.02□□□□□ -1.93
COL20A1Q9P218 RNU6-976P-201ENST00000516086 111 ntBASIC3.02□□□□□ -1.93
COL20A1Q9P218 RNA5SP148-201ENST00000516527 94 ntBASIC3.02□□□□□ -1.93
COL20A1Q9P218 RNU6-567P-201ENST00000516746 107 ntBASIC3.02□□□□□ -1.93
COL20A1Q9P218 AL442663.2-201ENST00000554385 511 ntBASIC3.02□□□□□ -1.93
COL20A1Q9P218 AC103810.1-201ENST00000579873 453 ntBASIC3.02□□□□□ -1.93
COL20A1Q9P218 MIR4506-201ENST00000584693 77 ntBASIC3.02□□□□□ -1.93
COL20A1Q9P218 AC060766.3-201ENST00000591442 263 ntBASIC3.02□□□□□ -1.93
COL20A1Q9P218 AL359198.2-201ENST00000611836 194 ntBASIC3.02□□□□□ -1.93
COL20A1Q9P218 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.02□□□□□ -1.93
COL20A1Q9P218 AC137590.2-201ENST00000619709 240 ntBASIC3.02□□□□□ -1.93
COL20A1Q9P218 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
COL20A1Q9P218 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
COL20A1Q9P218 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
COL20A1Q9P218 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.01□□□□□ -1.93
COL20A1Q9P218 RNU6-655P-201ENST00000362858 107 ntBASIC3.01□□□□□ -1.93
COL20A1Q9P218 RNY1P16-201ENST00000363063 111 ntBASIC3.01□□□□□ -1.93
COL20A1Q9P218 RNU6-595P-201ENST00000363944 107 ntBASIC3.01□□□□□ -1.93
COL20A1Q9P218 Y_RNA.197-201ENST00000364004 102 ntBASIC3.01□□□□□ -1.93
COL20A1Q9P218 U3.13-201ENST00000364804 214 ntBASIC3.01□□□□□ -1.93
COL20A1Q9P218 RNU6-1227P-201ENST00000383981 107 ntBASIC3.01□□□□□ -1.93
COL20A1Q9P218 MTCYBP2-201ENST00000407745 171 ntBASIC3.01□□□□□ -1.93
COL20A1Q9P218 RN7SKP123-201ENST00000410732 291 ntBASIC3.01□□□□□ -1.93
COL20A1Q9P218 AL354751.2-201ENST00000415471 210 ntBASIC3.01□□□□□ -1.93
COL20A1Q9P218 AC243428.1-201ENST00000421099 264 ntBASIC3.01□□□□□ -1.93
COL20A1Q9P218 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
COL20A1Q9P218 AC244505.4-201ENST00000434905 287 ntBASIC3.01□□□□□ -1.93
COL20A1Q9P218 RPL23AP58-201ENST00000440453 469 ntBASIC3.01□□□□□ -1.93
COL20A1Q9P218 SSXP5-201ENST00000443473 287 ntBASIC3.01□□□□□ -1.93
COL20A1Q9P218 AL353705.4-201ENST00000449661 238 ntBASIC3.01□□□□□ -1.93
COL20A1Q9P218 RPL30P1-201ENST00000488676 339 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms