Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 AC018692.3-201ENST00000623929 123 ntBASIC4.24□□□□□ -1.73
CXXC1Q9P0U4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.24□□□□□ -1.73
CXXC1Q9P0U4 AL035425.3-201ENST00000564206 4996 ntBASIC4.24□□□□□ -1.73
CXXC1Q9P0U4 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.24□□□□□ -1.73
CXXC1Q9P0U4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CXXC1Q9P0U4 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CXXC1Q9P0U4 AC139713.2-215ENST00000641428 5037 ntBASIC4.23□□□□□ -1.73
CXXC1Q9P0U4 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CXXC1Q9P0U4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.23□□□□□ -1.73
CXXC1Q9P0U4 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CXXC1Q9P0U4 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CXXC1Q9P0U4 RNA5SP295-201ENST00000362655 121 ntBASIC4.23□□□□□ -1.73
CXXC1Q9P0U4 Y_RNA.233-201ENST00000364407 101 ntBASIC4.23□□□□□ -1.73
CXXC1Q9P0U4 Y_RNA.262-201ENST00000364641 102 ntBASIC4.23□□□□□ -1.73
CXXC1Q9P0U4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CXXC1Q9P0U4 SNORA40.19-201ENST00000390846 128 ntBASIC4.23□□□□□ -1.73
CXXC1Q9P0U4 MIR1289-1-201ENST00000408836 144 ntBASIC4.23□□□□□ -1.73
CXXC1Q9P0U4 AC009237.7-201ENST00000447357 229 ntBASIC4.23□□□□□ -1.73
CXXC1Q9P0U4 SNORA31.1-201ENST00000515993 133 ntBASIC4.23□□□□□ -1.73
CXXC1Q9P0U4 SNORA31.5-201ENST00000516190 133 ntBASIC4.23□□□□□ -1.73
CXXC1Q9P0U4 RNU6-191P-201ENST00000516295 94 ntBASIC4.23□□□□□ -1.73
CXXC1Q9P0U4 RNU6-255P-201ENST00000516957 105 ntBASIC4.23□□□□□ -1.73
CXXC1Q9P0U4 AC022559.1-201ENST00000520905 205 ntBASIC4.23□□□□□ -1.73
CXXC1Q9P0U4 GNRHR2P1-201ENST00000555315 631 ntBASIC4.23□□□□□ -1.73
CXXC1Q9P0U4 MIR3145-201ENST00000580727 82 ntBASIC4.23□□□□□ -1.73
CXXC1Q9P0U4 RNU1-30P-201ENST00000606575 163 ntBASIC4.23□□□□□ -1.73
CXXC1Q9P0U4 uc_338.14-201ENST00000613162 166 ntBASIC4.23□□□□□ -1.73
CXXC1Q9P0U4 MAPK10-303ENST00000641324 3959 ntBASIC4.22□□□□□ -1.73
CXXC1Q9P0U4 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CXXC1Q9P0U4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CXXC1Q9P0U4 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
CXXC1Q9P0U4 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CXXC1Q9P0U4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CXXC1Q9P0U4 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CXXC1Q9P0U4 Y_RNA.308-201ENST00000365043 101 ntBASIC4.22□□□□□ -1.73
CXXC1Q9P0U4 RNU1-57P-201ENST00000384491 166 ntBASIC4.22□□□□□ -1.73
CXXC1Q9P0U4 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.22□□□□□ -1.73
CXXC1Q9P0U4 AC027124.2-201ENST00000428249 105 ntBASIC4.22□□□□□ -1.73
CXXC1Q9P0U4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.22□□□□□ -1.73
CXXC1Q9P0U4 RPS3P1-201ENST00000456781 192 ntBASIC4.22□□□□□ -1.73
CXXC1Q9P0U4 AC112771.1-201ENST00000463581 102 ntBASIC4.22□□□□□ -1.73
CXXC1Q9P0U4 SNRPGP3-201ENST00000469405 227 ntBASIC4.22□□□□□ -1.73
CXXC1Q9P0U4 AC145146.1-201ENST00000496370 254 ntBASIC4.22□□□□□ -1.73
CXXC1Q9P0U4 RN7SKP18-201ENST00000516005 275 ntBASIC4.22□□□□□ -1.73
CXXC1Q9P0U4 RNU6-1278P-201ENST00000516130 107 ntBASIC4.22□□□□□ -1.73
CXXC1Q9P0U4 RNU6-344P-201ENST00000516635 111 ntBASIC4.22□□□□□ -1.73
CXXC1Q9P0U4 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.22□□□□□ -1.73
CXXC1Q9P0U4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.22□□□□□ -1.73
CXXC1Q9P0U4 MIR3133-201ENST00000583157 78 ntBASIC4.22□□□□□ -1.73
CXXC1Q9P0U4 MIR5187-201ENST00000583479 76 ntBASIC4.22□□□□□ -1.73
CXXC1Q9P0U4 AC025946.2-201ENST00000603398 234 ntBASIC4.22□□□□□ -1.73
CXXC1Q9P0U4 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.22□□□□□ -1.73
CXXC1Q9P0U4 AC005086.4-201ENST00000623065 213 ntBASIC4.22□□□□□ -1.73
CXXC1Q9P0U4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.22□□□□□ -1.73
CXXC1Q9P0U4 AC026241.1-201ENST00000517873 2142 ntBASIC4.22□□□□□ -1.73
CXXC1Q9P0U4 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CXXC1Q9P0U4 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
CXXC1Q9P0U4 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
CXXC1Q9P0U4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
CXXC1Q9P0U4 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.73
CXXC1Q9P0U4 AL136164.4-201ENST00000625013 2135 ntBASIC4.21□□□□□ -1.74
CXXC1Q9P0U4 AC092435.4-201ENST00000623012 4159 ntBASIC4.21□□□□□ -1.74
CXXC1Q9P0U4 RNU4-15P-201ENST00000362613 141 ntBASIC4.21□□□□□ -1.74
CXXC1Q9P0U4 RNU1-35P-201ENST00000362782 153 ntBASIC4.21□□□□□ -1.74
CXXC1Q9P0U4 RNU6-923P-201ENST00000364753 107 ntBASIC4.21□□□□□ -1.74
CXXC1Q9P0U4 Y_RNA.415-201ENST00000384012 112 ntBASIC4.21□□□□□ -1.74
CXXC1Q9P0U4 MIR767-201ENST00000390228 109 ntBASIC4.21□□□□□ -1.74
CXXC1Q9P0U4 RNU6-493P-201ENST00000391321 108 ntBASIC4.21□□□□□ -1.74
CXXC1Q9P0U4 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.21□□□□□ -1.74
CXXC1Q9P0U4 AC009963.1-201ENST00000417265 157 ntBASIC4.21□□□□□ -1.74
CXXC1Q9P0U4 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.21□□□□□ -1.74
CXXC1Q9P0U4 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CXXC1Q9P0U4 RPL23AP70-201ENST00000483361 460 ntBASIC4.21□□□□□ -1.74
CXXC1Q9P0U4 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.21□□□□□ -1.74
CXXC1Q9P0U4 TRAPPC2P7-201ENST00000509650 231 ntBASIC4.21□□□□□ -1.74
CXXC1Q9P0U4 RNU6-966P-201ENST00000516479 104 ntBASIC4.21□□□□□ -1.74
CXXC1Q9P0U4 TGIF1P1-201ENST00000558095 802 ntBASIC4.21□□□□□ -1.74
CXXC1Q9P0U4 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.21□□□□□ -1.74
CXXC1Q9P0U4 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.21□□□□□ -1.74
CXXC1Q9P0U4 MIR5006-201ENST00000583027 110 ntBASIC4.21□□□□□ -1.74
CXXC1Q9P0U4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.21□□□□□ -1.74
CXXC1Q9P0U4 U6.106-201ENST00000636360 105 ntBASIC4.21□□□□□ -1.74
CXXC1Q9P0U4 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.21□□□□□ -1.74
CXXC1Q9P0U4 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CXXC1Q9P0U4 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
CXXC1Q9P0U4 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CXXC1Q9P0U4 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CXXC1Q9P0U4 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.2□□□□□ -1.74
CXXC1Q9P0U4 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CXXC1Q9P0U4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CXXC1Q9P0U4 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CXXC1Q9P0U4 RNU1-105P-201ENST00000363470 161 ntBASIC4.2□□□□□ -1.74
CXXC1Q9P0U4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CXXC1Q9P0U4 RNU6-918P-201ENST00000391219 106 ntBASIC4.2□□□□□ -1.74
CXXC1Q9P0U4 RNU6-1077P-201ENST00000410506 102 ntBASIC4.2□□□□□ -1.74
CXXC1Q9P0U4 RN7SKP284-201ENST00000411002 343 ntBASIC4.2□□□□□ -1.74
CXXC1Q9P0U4 AC004386.2-201ENST00000441858 148 ntBASIC4.2□□□□□ -1.74
CXXC1Q9P0U4 AC091179.1-201ENST00000461606 579 ntBASIC4.2□□□□□ -1.74
CXXC1Q9P0U4 RPL36AP48-201ENST00000485521 314 ntBASIC4.2□□□□□ -1.74
CXXC1Q9P0U4 AC074198.2-201ENST00000508153 258 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms