Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 RPL23AP14-201ENST00000468281 468 ntBASIC4□□□□□ -1.77
LMCD1Q9NZU5 AP000870.1-201ENST00000472927 406 ntBASIC4□□□□□ -1.77
LMCD1Q9NZU5 AC091959.1-201ENST00000495857 238 ntBASIC4□□□□□ -1.77
LMCD1Q9NZU5 SNORA31.20-201ENST00000517111 133 ntBASIC4□□□□□ -1.77
LMCD1Q9NZU5 UBE2Q2P8-201ENST00000560644 102 ntBASIC4□□□□□ -1.77
LMCD1Q9NZU5 MIR3613-201ENST00000579844 87 ntBASIC4□□□□□ -1.77
LMCD1Q9NZU5 AC008749.1-201ENST00000597650 306 ntBASIC4□□□□□ -1.77
LMCD1Q9NZU5 AC006254.2-201ENST00000603259 279 ntBASIC4□□□□□ -1.77
LMCD1Q9NZU5 Y_RNA.802-201ENST00000614892 130 ntBASIC4□□□□□ -1.77
LMCD1Q9NZU5 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4□□□□□ -1.77
LMCD1Q9NZU5 MIR6852-201ENST00000621699 66 ntBASIC4□□□□□ -1.77
LMCD1Q9NZU5 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4□□□□□ -1.77
LMCD1Q9NZU5 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4□□□□□ -1.77
LMCD1Q9NZU5 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4□□□□□ -1.77
LMCD1Q9NZU5 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4□□□□□ -1.77
LMCD1Q9NZU5 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
LMCD1Q9NZU5 AC116096.1-201ENST00000566804 2314 ntBASIC3.99□□□□□ -1.77
LMCD1Q9NZU5 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LMCD1Q9NZU5 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LMCD1Q9NZU5 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LMCD1Q9NZU5 RNU6-834P-201ENST00000362367 110 ntBASIC3.99□□□□□ -1.77
LMCD1Q9NZU5 RNU6-626P-201ENST00000363354 107 ntBASIC3.99□□□□□ -1.77
LMCD1Q9NZU5 RNU6-151P-201ENST00000364158 107 ntBASIC3.99□□□□□ -1.77
LMCD1Q9NZU5 RNU6-335P-201ENST00000364563 113 ntBASIC3.99□□□□□ -1.77
LMCD1Q9NZU5 RNY4P18-201ENST00000391107 89 ntBASIC3.99□□□□□ -1.77
LMCD1Q9NZU5 RN7SL93P-201ENST00000463035 293 ntBASIC3.99□□□□□ -1.77
LMCD1Q9NZU5 KC877373.1-201ENST00000479066 408 ntBASIC3.99□□□□□ -1.77
LMCD1Q9NZU5 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.99□□□□□ -1.77
LMCD1Q9NZU5 BTF3L4P4-201ENST00000506381 449 ntBASIC3.99□□□□□ -1.77
LMCD1Q9NZU5 AC010265.1-201ENST00000513509 211 ntBASIC3.99□□□□□ -1.77
LMCD1Q9NZU5 SCARNA15.2-201ENST00000516409 127 ntBASIC3.99□□□□□ -1.77
LMCD1Q9NZU5 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.99□□□□□ -1.77
LMCD1Q9NZU5 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.99□□□□□ -1.77
LMCD1Q9NZU5 AP002001.1-203ENST00000534002 267 ntBASIC3.99□□□□□ -1.77
LMCD1Q9NZU5 CYCSP26-201ENST00000534107 320 ntBASIC3.99□□□□□ -1.77
LMCD1Q9NZU5 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.99□□□□□ -1.77
LMCD1Q9NZU5 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.99□□□□□ -1.77
LMCD1Q9NZU5 MIR4679-2-201ENST00000578358 77 ntBASIC3.99□□□□□ -1.77
LMCD1Q9NZU5 SCARNA4-201ENST00000629045 128 ntBASIC3.99□□□□□ -1.77
LMCD1Q9NZU5 U6.98-201ENST00000637157 84 ntBASIC3.99□□□□□ -1.77
LMCD1Q9NZU5 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
LMCD1Q9NZU5 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
LMCD1Q9NZU5 AC010332.2-201ENST00000613083 1904 ntBASIC3.99□□□□□ -1.77
LMCD1Q9NZU5 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.99□□□□□ -1.77
LMCD1Q9NZU5 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.99□□□□□ -1.77
LMCD1Q9NZU5 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.98□□□□□ -1.77
LMCD1Q9NZU5 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LMCD1Q9NZU5 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.98□□□□□ -1.77
LMCD1Q9NZU5 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LMCD1Q9NZU5 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LMCD1Q9NZU5 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.98□□□□□ -1.77
LMCD1Q9NZU5 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.98□□□□□ -1.77
LMCD1Q9NZU5 AL137159.1-201ENST00000452808 512 ntBASIC3.98□□□□□ -1.77
LMCD1Q9NZU5 AC073901.1-201ENST00000462471 408 ntBASIC3.98□□□□□ -1.77
LMCD1Q9NZU5 RPL21P10-201ENST00000463521 490 ntBASIC3.98□□□□□ -1.77
LMCD1Q9NZU5 RN7SL585P-201ENST00000470538 280 ntBASIC3.98□□□□□ -1.77
LMCD1Q9NZU5 RPS20P22-201ENST00000473700 357 ntBASIC3.98□□□□□ -1.77
LMCD1Q9NZU5 Y_RNA.686-201ENST00000516548 134 ntBASIC3.98□□□□□ -1.77
LMCD1Q9NZU5 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.98□□□□□ -1.77
LMCD1Q9NZU5 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.98□□□□□ -1.77
LMCD1Q9NZU5 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.98□□□□□ -1.77
LMCD1Q9NZU5 AC244205.2-202ENST00000635781 342 ntBASIC3.98□□□□□ -1.77
LMCD1Q9NZU5 AC241585.2-209ENST00000638217 143 ntBASIC3.98□□□□□ -1.77
LMCD1Q9NZU5 AC110774.1-201ENST00000623567 2018 ntBASIC3.98□□□□□ -1.77
LMCD1Q9NZU5 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LMCD1Q9NZU5 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
LMCD1Q9NZU5 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LMCD1Q9NZU5 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LMCD1Q9NZU5 UBE2WP1-201ENST00000362030 340 ntBASIC3.97□□□□□ -1.77
LMCD1Q9NZU5 RNU6-20P-201ENST00000384106 107 ntBASIC3.97□□□□□ -1.77
LMCD1Q9NZU5 Y_RNA.446-201ENST00000384178 104 ntBASIC3.97□□□□□ -1.77
LMCD1Q9NZU5 RNU6-541P-201ENST00000384709 110 ntBASIC3.97□□□□□ -1.77
LMCD1Q9NZU5 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LMCD1Q9NZU5 OOSP1P1-201ENST00000423265 274 ntBASIC3.97□□□□□ -1.77
LMCD1Q9NZU5 MTND4LP9-201ENST00000427694 174 ntBASIC3.97□□□□□ -1.77
LMCD1Q9NZU5 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LMCD1Q9NZU5 MRPS10P1-201ENST00000448483 130 ntBASIC3.97□□□□□ -1.77
LMCD1Q9NZU5 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.97□□□□□ -1.77
LMCD1Q9NZU5 RPL23AP3-201ENST00000453844 468 ntBASIC3.97□□□□□ -1.77
LMCD1Q9NZU5 AC008155.2-201ENST00000464337 397 ntBASIC3.97□□□□□ -1.77
LMCD1Q9NZU5 AC010285.1-201ENST00000470580 392 ntBASIC3.97□□□□□ -1.77
LMCD1Q9NZU5 AC006517.1-201ENST00000480485 328 ntBASIC3.97□□□□□ -1.77
LMCD1Q9NZU5 SNORA27.4-201ENST00000516650 95 ntBASIC3.97□□□□□ -1.77
LMCD1Q9NZU5 RNU6-1234P-201ENST00000516877 103 ntBASIC3.97□□□□□ -1.77
LMCD1Q9NZU5 AC012493.2-201ENST00000595083 291 ntBASIC3.97□□□□□ -1.77
LMCD1Q9NZU5 SNRPGP15-201ENST00000600149 222 ntBASIC3.97□□□□□ -1.77
LMCD1Q9NZU5 AC005828.6-201ENST00000606610 232 ntBASIC3.97□□□□□ -1.77
LMCD1Q9NZU5 RMST_6.1-201ENST00000611980 203 ntBASIC3.97□□□□□ -1.77
LMCD1Q9NZU5 AC005296.1-201ENST00000616145 209 ntBASIC3.97□□□□□ -1.77
LMCD1Q9NZU5 AL591424.2-201ENST00000617023 128 ntBASIC3.97□□□□□ -1.77
LMCD1Q9NZU5 U6.99-201ENST00000637524 83 ntBASIC3.97□□□□□ -1.77
LMCD1Q9NZU5 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
LMCD1Q9NZU5 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LMCD1Q9NZU5 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
LMCD1Q9NZU5 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LMCD1Q9NZU5 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.77
LMCD1Q9NZU5 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 AP001486.2-201ENST00000561652 5113 ntBASIC3.96□□□□□ -1.78
LMCD1Q9NZU5 RNU6-105P-201ENST00000363909 104 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms