Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
HPF1Q9NWY4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.69□□□□□ -2.14
HPF1Q9NWY4 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.69□□□□□ -2.14
HPF1Q9NWY4 SNRPGP9-201ENST00000456025 225 ntBASIC1.69□□□□□ -2.14
HPF1Q9NWY4 AC107393.1-201ENST00000512403 346 ntBASIC1.69□□□□□ -2.14
HPF1Q9NWY4 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.69□□□□□ -2.14
HPF1Q9NWY4 RNU6-567P-201ENST00000516746 107 ntBASIC1.69□□□□□ -2.14
HPF1Q9NWY4 AP002963.1-201ENST00000530590 184 ntBASIC1.69□□□□□ -2.14
HPF1Q9NWY4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.69□□□□□ -2.14
HPF1Q9NWY4 MIR4422-201ENST00000581938 83 ntBASIC1.69□□□□□ -2.14
HPF1Q9NWY4 AC010928.2-201ENST00000588017 287 ntBASIC1.69□□□□□ -2.14
HPF1Q9NWY4 AC022513.1-201ENST00000624512 117 ntBASIC1.69□□□□□ -2.14
HPF1Q9NWY4 RNU6-112P-201ENST00000363599 104 ntBASIC1.68□□□□□ -2.14
HPF1Q9NWY4 RNU6-266P-201ENST00000364225 107 ntBASIC1.68□□□□□ -2.14
HPF1Q9NWY4 RNU6-1127P-201ENST00000384580 107 ntBASIC1.68□□□□□ -2.14
HPF1Q9NWY4 SNORA16.2-201ENST00000390991 127 ntBASIC1.68□□□□□ -2.14
HPF1Q9NWY4 MIR1267-201ENST00000408723 78 ntBASIC1.68□□□□□ -2.14
HPF1Q9NWY4 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC1.68□□□□□ -2.14
HPF1Q9NWY4 BX295541.1-201ENST00000417774 250 ntBASIC1.68□□□□□ -2.14
HPF1Q9NWY4 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.68□□□□□ -2.14
HPF1Q9NWY4 MTCO3P46-201ENST00000425787 232 ntBASIC1.68□□□□□ -2.14
HPF1Q9NWY4 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.68□□□□□ -2.14
HPF1Q9NWY4 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.68□□□□□ -2.14
HPF1Q9NWY4 AC002486.1-201ENST00000435098 391 ntBASIC1.68□□□□□ -2.14
HPF1Q9NWY4 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.68□□□□□ -2.14
HPF1Q9NWY4 MTCO1P44-201ENST00000441935 243 ntBASIC1.68□□□□□ -2.14
HPF1Q9NWY4 AL357134.1-201ENST00000445848 426 ntBASIC1.68□□□□□ -2.14
HPF1Q9NWY4 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.68□□□□□ -2.14
HPF1Q9NWY4 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.68□□□□□ -2.14
HPF1Q9NWY4 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.68□□□□□ -2.14
HPF1Q9NWY4 ATP5EP1-201ENST00000510257 156 ntBASIC1.68□□□□□ -2.14
HPF1Q9NWY4 MTCO3P28-201ENST00000513351 515 ntBASIC1.68□□□□□ -2.14
HPF1Q9NWY4 SNORA25.17-201ENST00000517184 124 ntBASIC1.68□□□□□ -2.14
HPF1Q9NWY4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.68□□□□□ -2.14
HPF1Q9NWY4 MIR3941-201ENST00000582572 103 ntBASIC1.68□□□□□ -2.14
HPF1Q9NWY4 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.68□□□□□ -2.14
HPF1Q9NWY4 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HPF1Q9NWY4 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.68□□□□□ -2.14
HPF1Q9NWY4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
HPF1Q9NWY4 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
HPF1Q9NWY4 MTND5P9-201ENST00000503854 1755 ntBASIC1.67□□□□□ -2.14
HPF1Q9NWY4 RNU6-552P-201ENST00000362869 119 ntBASIC1.67□□□□□ -2.14
HPF1Q9NWY4 RNU6-827P-201ENST00000365553 106 ntBASIC1.67□□□□□ -2.14
HPF1Q9NWY4 RNU6-297P-201ENST00000384636 107 ntBASIC1.67□□□□□ -2.14
HPF1Q9NWY4 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.67□□□□□ -2.14
HPF1Q9NWY4 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.67□□□□□ -2.14
HPF1Q9NWY4 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.67□□□□□ -2.14
HPF1Q9NWY4 RPL23AP95-201ENST00000426806 265 ntBASIC1.67□□□□□ -2.14
HPF1Q9NWY4 AL133396.1-201ENST00000432048 687 ntBASIC1.67□□□□□ -2.14
HPF1Q9NWY4 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.67□□□□□ -2.14
HPF1Q9NWY4 AL133217.1-201ENST00000450980 425 ntBASIC1.67□□□□□ -2.14
HPF1Q9NWY4 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.67□□□□□ -2.14
HPF1Q9NWY4 PPP1R2P5-201ENST00000457256 603 ntBASIC1.67□□□□□ -2.14
HPF1Q9NWY4 SCARNA18-201ENST00000459004 134 ntBASIC1.67□□□□□ -2.14
HPF1Q9NWY4 AC021146.2-201ENST00000504736 556 ntBASIC1.67□□□□□ -2.14
HPF1Q9NWY4 RNU5F-4P-201ENST00000516581 114 ntBASIC1.67□□□□□ -2.14
HPF1Q9NWY4 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.67□□□□□ -2.14
HPF1Q9NWY4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.67□□□□□ -2.14
HPF1Q9NWY4 AC103996.1-201ENST00000555468 102 ntBASIC1.67□□□□□ -2.14
HPF1Q9NWY4 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.67□□□□□ -2.14
HPF1Q9NWY4 MIR4769-201ENST00000584126 77 ntBASIC1.67□□□□□ -2.14
HPF1Q9NWY4 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.67□□□□□ -2.14
HPF1Q9NWY4 AC078795.3-201ENST00000602913 472 ntBASIC1.67□□□□□ -2.14
HPF1Q9NWY4 AC084768.2-201ENST00000622736 221 ntBASIC1.67□□□□□ -2.14
HPF1Q9NWY4 Y_RNA.201-201ENST00000364052 96 ntBASIC1.66□□□□□ -2.14
HPF1Q9NWY4 SNORA16.1-201ENST00000364597 132 ntBASIC1.66□□□□□ -2.14
HPF1Q9NWY4 RNU4-91P-201ENST00000364778 135 ntBASIC1.66□□□□□ -2.14
HPF1Q9NWY4 RNU6-282P-201ENST00000365357 103 ntBASIC1.66□□□□□ -2.14
HPF1Q9NWY4 RNU6-606P-201ENST00000384721 111 ntBASIC1.66□□□□□ -2.14
HPF1Q9NWY4 RNU6-997P-201ENST00000384725 107 ntBASIC1.66□□□□□ -2.14
HPF1Q9NWY4 MIR9-3-201ENST00000385084 90 ntBASIC1.66□□□□□ -2.14
HPF1Q9NWY4 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
HPF1Q9NWY4 PIGFP2-201ENST00000421400 651 ntBASIC1.66□□□□□ -2.14
HPF1Q9NWY4 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.66□□□□□ -2.14
HPF1Q9NWY4 RPS27AP8-201ENST00000452665 445 ntBASIC1.66□□□□□ -2.14
HPF1Q9NWY4 RNA5SP269-201ENST00000459032 137 ntBASIC1.66□□□□□ -2.14
HPF1Q9NWY4 AC114801.2-201ENST00000503825 781 ntBASIC1.66□□□□□ -2.14
HPF1Q9NWY4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.66□□□□□ -2.14
HPF1Q9NWY4 SNORD60.2-201ENST00000516883 86 ntBASIC1.66□□□□□ -2.14
HPF1Q9NWY4 AC021231.3-201ENST00000558497 370 ntBASIC1.66□□□□□ -2.14
HPF1Q9NWY4 HMGB1P33-201ENST00000563485 527 ntBASIC1.66□□□□□ -2.14
HPF1Q9NWY4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.66□□□□□ -2.14
HPF1Q9NWY4 PCGEM1.1-201ENST00000613431 131 ntBASIC1.66□□□□□ -2.14
HPF1Q9NWY4 AL353997.5-201ENST00000618886 171 ntBASIC1.66□□□□□ -2.14
HPF1Q9NWY4 AC009161.2-201ENST00000624626 138 ntBASIC1.66□□□□□ -2.14
HPF1Q9NWY4 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.66□□□□□ -2.14
HPF1Q9NWY4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.66□□□□□ -2.14
HPF1Q9NWY4 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.66□□□□□ -2.14
HPF1Q9NWY4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.65□□□□□ -2.14
HPF1Q9NWY4 WWP1P1-201ENST00000466609 2769 ntBASIC1.65□□□□□ -2.14
HPF1Q9NWY4 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
HPF1Q9NWY4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
HPF1Q9NWY4 RNU6-1026P-201ENST00000384465 108 ntBASIC1.65□□□□□ -2.15
HPF1Q9NWY4 Y_RNA.504-201ENST00000384481 104 ntBASIC1.65□□□□□ -2.15
HPF1Q9NWY4 RNU2-29P-201ENST00000410423 189 ntBASIC1.65□□□□□ -2.15
HPF1Q9NWY4 RNU2-41P-201ENST00000410991 178 ntBASIC1.65□□□□□ -2.15
HPF1Q9NWY4 EBAG9P1-201ENST00000418955 543 ntBASIC1.65□□□□□ -2.15
HPF1Q9NWY4 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.65□□□□□ -2.15
HPF1Q9NWY4 CYCSP49-201ENST00000420810 319 ntBASIC1.65□□□□□ -2.15
HPF1Q9NWY4 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms