Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 SNORA32.2-201ENST00000384049 122 ntBASIC1.27□□□□□ -2.21
CLN6Q9NWW5 RNU6-456P-201ENST00000384493 107 ntBASIC1.27□□□□□ -2.21
CLN6Q9NWW5 MIR758-201ENST00000390227 88 ntBASIC1.27□□□□□ -2.21
CLN6Q9NWW5 SNORA67.6-201ENST00000391093 99 ntBASIC1.27□□□□□ -2.21
CLN6Q9NWW5 RPS29P13-201ENST00000402041 169 ntBASIC1.27□□□□□ -2.21
CLN6Q9NWW5 MIR1267-201ENST00000408723 78 ntBASIC1.27□□□□□ -2.21
CLN6Q9NWW5 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.27□□□□□ -2.21
CLN6Q9NWW5 AC016632.1-201ENST00000503994 196 ntBASIC1.27□□□□□ -2.21
CLN6Q9NWW5 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.27□□□□□ -2.21
CLN6Q9NWW5 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
CLN6Q9NWW5 ATP5EP1-201ENST00000510257 156 ntBASIC1.27□□□□□ -2.21
CLN6Q9NWW5 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.27□□□□□ -2.21
CLN6Q9NWW5 RNU2-69P-201ENST00000516061 100 ntBASIC1.27□□□□□ -2.21
CLN6Q9NWW5 SNORA31.24-201ENST00000517232 57 ntBASIC1.27□□□□□ -2.21
CLN6Q9NWW5 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.27□□□□□ -2.21
CLN6Q9NWW5 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.27□□□□□ -2.21
CLN6Q9NWW5 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.27□□□□□ -2.21
CLN6Q9NWW5 RSL24D1P11-201ENST00000591045 491 ntBASIC1.27□□□□□ -2.21
CLN6Q9NWW5 AC064872.1-201ENST00000604823 1072 ntBASIC1.27□□□□□ -2.21
CLN6Q9NWW5 AC002044.1-201ENST00000606707 158 ntBASIC1.27□□□□□ -2.21
CLN6Q9NWW5 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.27□□□□□ -2.21
CLN6Q9NWW5 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.27□□□□□ -2.21
CLN6Q9NWW5 AC007494.3-201ENST00000624660 743 ntBASIC1.27□□□□□ -2.21
CLN6Q9NWW5 AL161722.3-201ENST00000605789 2983 ntBASIC1.27□□□□□ -2.21
CLN6Q9NWW5 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CLN6Q9NWW5 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CLN6Q9NWW5 MTND5P9-201ENST00000503854 1755 ntBASIC1.26□□□□□ -2.21
CLN6Q9NWW5 RNU6-827P-201ENST00000365553 106 ntBASIC1.26□□□□□ -2.21
CLN6Q9NWW5 RNU5A-2P-201ENST00000384337 116 ntBASIC1.26□□□□□ -2.21
CLN6Q9NWW5 SNORA26.9-201ENST00000391322 122 ntBASIC1.26□□□□□ -2.21
CLN6Q9NWW5 RNA5SP201-201ENST00000410316 124 ntBASIC1.26□□□□□ -2.21
CLN6Q9NWW5 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.26□□□□□ -2.21
CLN6Q9NWW5 SNAP23P1-201ENST00000433229 246 ntBASIC1.26□□□□□ -2.21
CLN6Q9NWW5 AL121601.2-201ENST00000438019 707 ntBASIC1.26□□□□□ -2.21
CLN6Q9NWW5 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.26□□□□□ -2.21
CLN6Q9NWW5 HSPE1P24-201ENST00000450782 238 ntBASIC1.26□□□□□ -2.21
CLN6Q9NWW5 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.26□□□□□ -2.21
CLN6Q9NWW5 RPS27AP8-201ENST00000452665 445 ntBASIC1.26□□□□□ -2.21
CLN6Q9NWW5 RPS29P23-201ENST00000458635 123 ntBASIC1.26□□□□□ -2.21
CLN6Q9NWW5 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.26□□□□□ -2.21
CLN6Q9NWW5 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.26□□□□□ -2.21
CLN6Q9NWW5 MTND1P24-201ENST00000552175 861 ntBASIC1.26□□□□□ -2.21
CLN6Q9NWW5 AC103996.1-201ENST00000555468 102 ntBASIC1.26□□□□□ -2.21
CLN6Q9NWW5 HMGB1P33-201ENST00000563485 527 ntBASIC1.26□□□□□ -2.21
CLN6Q9NWW5 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.26□□□□□ -2.21
CLN6Q9NWW5 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.26□□□□□ -2.21
CLN6Q9NWW5 AC093424.1-201ENST00000604999 338 ntBASIC1.26□□□□□ -2.21
CLN6Q9NWW5 PRR13P7-201ENST00000605538 430 ntBASIC1.26□□□□□ -2.21
CLN6Q9NWW5 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.26□□□□□ -2.21
CLN6Q9NWW5 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CLN6Q9NWW5 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.25□□□□□ -2.21
CLN6Q9NWW5 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CLN6Q9NWW5 MIR340-201ENST00000362125 95 ntBASIC1.25□□□□□ -2.21
CLN6Q9NWW5 RNU6-552P-201ENST00000362869 119 ntBASIC1.25□□□□□ -2.21
CLN6Q9NWW5 RNU6-266P-201ENST00000364225 107 ntBASIC1.25□□□□□ -2.21
CLN6Q9NWW5 RNU6-1127P-201ENST00000384580 107 ntBASIC1.25□□□□□ -2.21
CLN6Q9NWW5 SNORA16.2-201ENST00000390991 127 ntBASIC1.25□□□□□ -2.21
CLN6Q9NWW5 SNORA26.3-201ENST00000391119 136 ntBASIC1.25□□□□□ -2.21
CLN6Q9NWW5 RNU2-41P-201ENST00000410991 178 ntBASIC1.25□□□□□ -2.21
CLN6Q9NWW5 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.25□□□□□ -2.21
CLN6Q9NWW5 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.25□□□□□ -2.21
CLN6Q9NWW5 SDAD1P3-201ENST00000427380 333 ntBASIC1.25□□□□□ -2.21
CLN6Q9NWW5 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.25□□□□□ -2.21
CLN6Q9NWW5 RNU7-14P-201ENST00000459331 62 ntBASIC1.25□□□□□ -2.21
CLN6Q9NWW5 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.25□□□□□ -2.21
CLN6Q9NWW5 RN7SKP287-201ENST00000516546 266 ntBASIC1.25□□□□□ -2.21
CLN6Q9NWW5 RNU5F-4P-201ENST00000516581 114 ntBASIC1.25□□□□□ -2.21
CLN6Q9NWW5 RNU6-567P-201ENST00000516746 107 ntBASIC1.25□□□□□ -2.21
CLN6Q9NWW5 SNORA25.17-201ENST00000517184 124 ntBASIC1.25□□□□□ -2.21
CLN6Q9NWW5 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CLN6Q9NWW5 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.25□□□□□ -2.21
CLN6Q9NWW5 AP003034.1-201ENST00000534621 422 ntBASIC1.25□□□□□ -2.21
CLN6Q9NWW5 MIR3915-201ENST00000578518 97 ntBASIC1.25□□□□□ -2.21
CLN6Q9NWW5 VN1R80P-201ENST00000597126 338 ntBASIC1.25□□□□□ -2.21
CLN6Q9NWW5 AC078795.3-201ENST00000602913 472 ntBASIC1.25□□□□□ -2.21
CLN6Q9NWW5 PCGEM1.1-201ENST00000613431 131 ntBASIC1.25□□□□□ -2.21
CLN6Q9NWW5 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.25□□□□□ -2.21
CLN6Q9NWW5 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.25□□□□□ -2.21
CLN6Q9NWW5 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.25□□□□□ -2.21
CLN6Q9NWW5 RNU6-1026P-201ENST00000384465 108 ntBASIC1.24□□□□□ -2.21
CLN6Q9NWW5 Y_RNA.504-201ENST00000384481 104 ntBASIC1.24□□□□□ -2.21
CLN6Q9NWW5 RNU6-296P-201ENST00000384608 107 ntBASIC1.24□□□□□ -2.21
CLN6Q9NWW5 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
CLN6Q9NWW5 BX295541.1-201ENST00000417774 250 ntBASIC1.24□□□□□ -2.21
CLN6Q9NWW5 RPL30P13-201ENST00000418873 348 ntBASIC1.24□□□□□ -2.21
CLN6Q9NWW5 EBAG9P1-201ENST00000418955 543 ntBASIC1.24□□□□□ -2.21
CLN6Q9NWW5 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.24□□□□□ -2.21
CLN6Q9NWW5 RPL23AP95-201ENST00000426806 265 ntBASIC1.24□□□□□ -2.21
CLN6Q9NWW5 AC133104.1-201ENST00000429100 218 ntBASIC1.24□□□□□ -2.21
CLN6Q9NWW5 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.24□□□□□ -2.21
CLN6Q9NWW5 AL133396.1-201ENST00000432048 687 ntBASIC1.24□□□□□ -2.21
CLN6Q9NWW5 AC002486.1-201ENST00000435098 391 ntBASIC1.24□□□□□ -2.21
CLN6Q9NWW5 UBE2V1P8-201ENST00000437166 265 ntBASIC1.24□□□□□ -2.21
CLN6Q9NWW5 AC007677.1-201ENST00000445757 515 ntBASIC1.24□□□□□ -2.21
CLN6Q9NWW5 AC245517.4-201ENST00000448601 281 ntBASIC1.24□□□□□ -2.21
CLN6Q9NWW5 AL133217.1-201ENST00000450980 425 ntBASIC1.24□□□□□ -2.21
CLN6Q9NWW5 SNORD42A-201ENST00000459584 64 ntBASIC1.24□□□□□ -2.21
CLN6Q9NWW5 TOMM22P6-201ENST00000465035 409 ntBASIC1.24□□□□□ -2.21
CLN6Q9NWW5 GMFBP1-201ENST00000467831 427 ntBASIC1.24□□□□□ -2.21
CLN6Q9NWW5 RPL36AP21-201ENST00000490372 323 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 148.7 ms