Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 SNORD42.2-201ENST00000365570 69 ntBASIC2.64□□□□□ -1.99
LIN7CQ9NUP9 Y_RNA.597-201ENST00000410463 100 ntBASIC2.64□□□□□ -1.99
LIN7CQ9NUP9 BMS1P22-201ENST00000414726 313 ntBASIC2.64□□□□□ -1.99
LIN7CQ9NUP9 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.64□□□□□ -1.99
LIN7CQ9NUP9 AC092423.1-201ENST00000430165 186 ntBASIC2.64□□□□□ -1.99
LIN7CQ9NUP9 AC009969.1-201ENST00000438726 172 ntBASIC2.64□□□□□ -1.99
LIN7CQ9NUP9 AL161788.1-201ENST00000441805 169 ntBASIC2.64□□□□□ -1.99
LIN7CQ9NUP9 AC104389.3-201ENST00000445629 235 ntBASIC2.64□□□□□ -1.99
LIN7CQ9NUP9 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.64□□□□□ -1.99
LIN7CQ9NUP9 AC008155.2-201ENST00000464337 397 ntBASIC2.64□□□□□ -1.99
LIN7CQ9NUP9 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.64□□□□□ -1.99
LIN7CQ9NUP9 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.64□□□□□ -1.99
LIN7CQ9NUP9 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.64□□□□□ -1.99
LIN7CQ9NUP9 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
LIN7CQ9NUP9 MIR4506-201ENST00000584693 77 ntBASIC2.64□□□□□ -1.99
LIN7CQ9NUP9 AC100812.1-201ENST00000607622 580 ntBASIC2.64□□□□□ -1.99
LIN7CQ9NUP9 RMST_6.1-201ENST00000611980 203 ntBASIC2.64□□□□□ -1.99
LIN7CQ9NUP9 AC008121.3-201ENST00000618726 433 ntBASIC2.64□□□□□ -1.99
LIN7CQ9NUP9 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 Y_RNA.138-201ENST00000363462 102 ntBASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 RNA5SP125-201ENST00000364843 120 ntBASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 RNU6-17P-201ENST00000384245 107 ntBASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 U8.10-201ENST00000384260 133 ntBASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 RNU6-18P-201ENST00000384527 107 ntBASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 Y_RNA.577-201ENST00000384794 101 ntBASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 MIR153-2-201ENST00000385225 87 ntBASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 RNU2-63P-201ENST00000410792 194 ntBASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 RPS26P42-201ENST00000413485 326 ntBASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 AC007098.1-201ENST00000420122 367 ntBASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 AC003685.2-201ENST00000422795 395 ntBASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 MRPS18CP6-201ENST00000423587 223 ntBASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 MTND1P14-201ENST00000427400 950 ntBASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 MTCO2P12-201ENST00000427426 682 ntBASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 CYP2C59P-201ENST00000457790 269 ntBASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 Y_RNA.639-201ENST00000458981 102 ntBASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 RN7SL75P-201ENST00000461926 281 ntBASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 RPL7P49-201ENST00000471402 708 ntBASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 AC105758.1-201ENST00000506038 399 ntBASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 RNA5SP385-201ENST00000515947 110 ntBASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 RNU6-1153P-201ENST00000516760 105 ntBASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 Y_RNA.706-201ENST00000516933 99 ntBASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 HSPE1P18-201ENST00000517602 280 ntBASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 AC044792.1-201ENST00000593294 196 ntBASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.63□□□□□ -1.99
LIN7CQ9NUP9 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 Y_RNA.5-201ENST00000362334 102 ntBASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 RNU6-874P-201ENST00000362390 105 ntBASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 U3.9-201ENST00000363823 204 ntBASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 RNU4-76P-201ENST00000364509 141 ntBASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 RNA5SP267-201ENST00000364893 126 ntBASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 RNA5SP240-201ENST00000365355 128 ntBASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 MIR549A-201ENST00000385268 96 ntBASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 MIR190B-201ENST00000401119 79 ntBASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 AL138885.1-201ENST00000405921 675 ntBASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 RNU6-1156P-201ENST00000410365 100 ntBASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 AC244505.4-201ENST00000434905 287 ntBASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 SSXP5-201ENST00000443473 287 ntBASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 AC007677.1-201ENST00000445757 515 ntBASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 RPS29P2-201ENST00000479278 136 ntBASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 RN7SL283P-201ENST00000489055 303 ntBASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 AC090096.1-201ENST00000489168 390 ntBASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 AC074250.1-201ENST00000511117 192 ntBASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 Y_RNA.661-201ENST00000516003 99 ntBASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 RNU6-976P-201ENST00000516086 111 ntBASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 CBX3P7-201ENST00000532876 502 ntBASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 EIF4A1P12-201ENST00000551910 141 ntBASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 AC023824.2-201ENST00000566185 400 ntBASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 AL355297.2-201ENST00000604792 129 ntBASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 uc_338.25-201ENST00000613756 156 ntBASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.62□□□□□ -1.99
LIN7CQ9NUP9 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
LIN7CQ9NUP9 SNORA51.4-201ENST00000364993 124 ntBASIC2.61□□□□□ -1.99
LIN7CQ9NUP9 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
LIN7CQ9NUP9 MIR95-201ENST00000385072 81 ntBASIC2.61□□□□□ -1.99
LIN7CQ9NUP9 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
LIN7CQ9NUP9 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
LIN7CQ9NUP9 RNA5SP274-201ENST00000410484 108 ntBASIC2.61□□□□□ -1.99
LIN7CQ9NUP9 RN7SKP58-201ENST00000411010 305 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms