Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 SNORA31.16-201ENST00000516773 139 ntBASIC2.5□□□□□ -2.01
SLC6A13Q9NSD5 RNU6-826P-201ENST00000516827 104 ntBASIC2.5□□□□□ -2.01
SLC6A13Q9NSD5 AL138963.2-201ENST00000605137 226 ntBASIC2.5□□□□□ -2.01
SLC6A13Q9NSD5 AC009994.1-201ENST00000606889 253 ntBASIC2.5□□□□□ -2.01
SLC6A13Q9NSD5 AC008121.3-201ENST00000618726 433 ntBASIC2.5□□□□□ -2.01
SLC6A13Q9NSD5 AL450472.1-202ENST00000637286 180 ntBASIC2.5□□□□□ -2.01
SLC6A13Q9NSD5 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.5□□□□□ -2.01
SLC6A13Q9NSD5 AC135776.4-201ENST00000624300 1904 ntBASIC2.5□□□□□ -2.01
SLC6A13Q9NSD5 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.5□□□□□ -2.01
SLC6A13Q9NSD5 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
SLC6A13Q9NSD5 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SLC6A13Q9NSD5 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.49□□□□□ -2.01
SLC6A13Q9NSD5 RNU4-56P-201ENST00000364700 142 ntBASIC2.49□□□□□ -2.01
SLC6A13Q9NSD5 RNA5SP125-201ENST00000364843 120 ntBASIC2.49□□□□□ -2.01
SLC6A13Q9NSD5 MIR29B2-201ENST00000385055 81 ntBASIC2.49□□□□□ -2.01
SLC6A13Q9NSD5 MIR95-201ENST00000385072 81 ntBASIC2.49□□□□□ -2.01
SLC6A13Q9NSD5 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
SLC6A13Q9NSD5 AL591034.2-201ENST00000402839 359 ntBASIC2.49□□□□□ -2.01
SLC6A13Q9NSD5 EIF4EP2-201ENST00000422816 654 ntBASIC2.49□□□□□ -2.01
SLC6A13Q9NSD5 AC093019.1-201ENST00000443135 252 ntBASIC2.49□□□□□ -2.01
SLC6A13Q9NSD5 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.49□□□□□ -2.01
SLC6A13Q9NSD5 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.49□□□□□ -2.01
SLC6A13Q9NSD5 Y_RNA.635-201ENST00000459041 101 ntBASIC2.49□□□□□ -2.01
SLC6A13Q9NSD5 AC008571.1-201ENST00000467232 300 ntBASIC2.49□□□□□ -2.01
SLC6A13Q9NSD5 MTND4P17-201ENST00000470444 350 ntBASIC2.49□□□□□ -2.01
SLC6A13Q9NSD5 CKS1BP2-201ENST00000497342 240 ntBASIC2.49□□□□□ -2.01
SLC6A13Q9NSD5 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.49□□□□□ -2.01
SLC6A13Q9NSD5 RNU6-507P-201ENST00000516045 100 ntBASIC2.49□□□□□ -2.01
SLC6A13Q9NSD5 RNU6-567P-201ENST00000516746 107 ntBASIC2.49□□□□□ -2.01
SLC6A13Q9NSD5 FGF7P1-201ENST00000582820 288 ntBASIC2.49□□□□□ -2.01
SLC6A13Q9NSD5 AC018462.2-201ENST00000605375 395 ntBASIC2.49□□□□□ -2.01
SLC6A13Q9NSD5 AC090517.3-201ENST00000625170 141 ntBASIC2.49□□□□□ -2.01
SLC6A13Q9NSD5 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SLC6A13Q9NSD5 snoU2_19.1-201ENST00000362361 80 ntBASIC2.48□□□□□ -2.01
SLC6A13Q9NSD5 SNORD50.1-201ENST00000362987 71 ntBASIC2.48□□□□□ -2.01
SLC6A13Q9NSD5 RNU6-1286P-201ENST00000383871 107 ntBASIC2.48□□□□□ -2.01
SLC6A13Q9NSD5 RNU6-968P-201ENST00000384076 107 ntBASIC2.48□□□□□ -2.01
SLC6A13Q9NSD5 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SLC6A13Q9NSD5 RNA5SP21-201ENST00000410917 96 ntBASIC2.48□□□□□ -2.01
SLC6A13Q9NSD5 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.48□□□□□ -2.01
SLC6A13Q9NSD5 USP9YP30-201ENST00000430729 455 ntBASIC2.48□□□□□ -2.01
SLC6A13Q9NSD5 AC107083.1-201ENST00000439643 279 ntBASIC2.48□□□□□ -2.01
SLC6A13Q9NSD5 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.48□□□□□ -2.01
SLC6A13Q9NSD5 AL161788.1-201ENST00000441805 169 ntBASIC2.48□□□□□ -2.01
SLC6A13Q9NSD5 FTH1P25-201ENST00000447665 469 ntBASIC2.48□□□□□ -2.01
SLC6A13Q9NSD5 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.48□□□□□ -2.01
SLC6A13Q9NSD5 AC090096.1-201ENST00000489168 390 ntBASIC2.48□□□□□ -2.01
SLC6A13Q9NSD5 RNU6-586P-201ENST00000517265 104 ntBASIC2.48□□□□□ -2.01
SLC6A13Q9NSD5 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.48□□□□□ -2.01
SLC6A13Q9NSD5 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.48□□□□□ -2.01
SLC6A13Q9NSD5 MIR4513-201ENST00000581077 86 ntBASIC2.48□□□□□ -2.01
SLC6A13Q9NSD5 AL078605.1-201ENST00000603529 500 ntBASIC2.48□□□□□ -2.01
SLC6A13Q9NSD5 AL033523.1-201ENST00000605153 153 ntBASIC2.48□□□□□ -2.01
SLC6A13Q9NSD5 AC009318.2-201ENST00000610917 651 ntBASIC2.48□□□□□ -2.01
SLC6A13Q9NSD5 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.48□□□□□ -2.01
SLC6A13Q9NSD5 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
SLC6A13Q9NSD5 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
SLC6A13Q9NSD5 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.47□□□□□ -2.01
SLC6A13Q9NSD5 SNORA5B-201ENST00000363786 132 ntBASIC2.47□□□□□ -2.01
SLC6A13Q9NSD5 Y_RNA.263-201ENST00000364659 114 ntBASIC2.47□□□□□ -2.01
SLC6A13Q9NSD5 RNU1-138P-201ENST00000384093 164 ntBASIC2.47□□□□□ -2.01
SLC6A13Q9NSD5 RNU6-1032P-201ENST00000384100 107 ntBASIC2.47□□□□□ -2.01
SLC6A13Q9NSD5 SNORA36A-201ENST00000384221 132 ntBASIC2.47□□□□□ -2.01
SLC6A13Q9NSD5 Y_RNA.474-201ENST00000384341 102 ntBASIC2.47□□□□□ -2.01
SLC6A13Q9NSD5 RNU6-174P-201ENST00000410406 106 ntBASIC2.47□□□□□ -2.01
SLC6A13Q9NSD5 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.47□□□□□ -2.01
SLC6A13Q9NSD5 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.47□□□□□ -2.01
SLC6A13Q9NSD5 AC079354.2-201ENST00000453523 154 ntBASIC2.47□□□□□ -2.01
SLC6A13Q9NSD5 AP000705.1-201ENST00000454567 350 ntBASIC2.47□□□□□ -2.01
SLC6A13Q9NSD5 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.47□□□□□ -2.01
SLC6A13Q9NSD5 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.47□□□□□ -2.01
SLC6A13Q9NSD5 RPL23AP94-201ENST00000512518 302 ntBASIC2.47□□□□□ -2.01
SLC6A13Q9NSD5 AC026782.1-201ENST00000512952 449 ntBASIC2.47□□□□□ -2.01
SLC6A13Q9NSD5 RNA5SP282-201ENST00000516355 108 ntBASIC2.47□□□□□ -2.01
SLC6A13Q9NSD5 SNORA48.11-201ENST00000517015 89 ntBASIC2.47□□□□□ -2.01
SLC6A13Q9NSD5 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.47□□□□□ -2.01
SLC6A13Q9NSD5 AC109446.1-201ENST00000566172 220 ntBASIC2.47□□□□□ -2.01
SLC6A13Q9NSD5 Z98751.3-201ENST00000604447 521 ntBASIC2.47□□□□□ -2.01
SLC6A13Q9NSD5 AC113139.1-201ENST00000605049 239 ntBASIC2.47□□□□□ -2.01
SLC6A13Q9NSD5 AL132765.2-201ENST00000610812 351 ntBASIC2.47□□□□□ -2.01
SLC6A13Q9NSD5 AC063943.3-201ENST00000615562 356 ntBASIC2.47□□□□□ -2.01
SLC6A13Q9NSD5 FO624990.1-201ENST00000636373 85 ntBASIC2.47□□□□□ -2.01
SLC6A13Q9NSD5 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.47□□□□□ -2.01
SLC6A13Q9NSD5 AC007336.1-201ENST00000576365 3828 ntBASIC2.47□□□□□ -2.01
SLC6A13Q9NSD5 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 RNU4-15P-201ENST00000362613 141 ntBASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 Y_RNA.70-201ENST00000362886 110 ntBASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 RNU6-1059P-201ENST00000363752 98 ntBASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 RNU6-1274P-201ENST00000384557 107 ntBASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 AL590556.1-201ENST00000423231 483 ntBASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 AC087499.2-201ENST00000432861 149 ntBASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 AC011816.1-201ENST00000441346 546 ntBASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 AL513124.1-201ENST00000450410 614 ntBASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 RNU7-26P-201ENST00000458980 63 ntBASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.46□□□□□ -2.02
SLC6A13Q9NSD5 FGF7P4-201ENST00000509595 295 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms