Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PRDM9Q9NQV7 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PRDM9Q9NQV7 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
PRDM9Q9NQV7 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PRDM9Q9NQV7 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
PRDM9Q9NQV7 Z98745.1-201ENST00000402553 494 ntBASIC4.44□□□□□ -1.7
PRDM9Q9NQV7 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.44□□□□□ -1.7
PRDM9Q9NQV7 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.44□□□□□ -1.7
PRDM9Q9NQV7 Y_RNA.685-201ENST00000516532 108 ntBASIC4.44□□□□□ -1.7
PRDM9Q9NQV7 RNU6-113P-201ENST00000516653 101 ntBASIC4.44□□□□□ -1.7
PRDM9Q9NQV7 HIGD1AP1-201ENST00000550979 275 ntBASIC4.44□□□□□ -1.7
PRDM9Q9NQV7 MIR4662B-201ENST00000579498 81 ntBASIC4.44□□□□□ -1.7
PRDM9Q9NQV7 RNU6-94P-201ENST00000607728 107 ntBASIC4.44□□□□□ -1.7
PRDM9Q9NQV7 AL136164.3-201ENST00000624429 3978 ntBASIC4.44□□□□□ -1.7
PRDM9Q9NQV7 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PRDM9Q9NQV7 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
PRDM9Q9NQV7 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
PRDM9Q9NQV7 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PRDM9Q9NQV7 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
PRDM9Q9NQV7 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.43□□□□□ -1.7
PRDM9Q9NQV7 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.43□□□□□ -1.7
PRDM9Q9NQV7 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PRDM9Q9NQV7 RNU6-50P-201ENST00000362356 103 ntBASIC4.43□□□□□ -1.7
PRDM9Q9NQV7 Y_RNA.49-201ENST00000362714 112 ntBASIC4.43□□□□□ -1.7
PRDM9Q9NQV7 RNU6-655P-201ENST00000362858 107 ntBASIC4.43□□□□□ -1.7
PRDM9Q9NQV7 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.43□□□□□ -1.7
PRDM9Q9NQV7 RNVU1-6-201ENST00000364688 164 ntBASIC4.43□□□□□ -1.7
PRDM9Q9NQV7 Y_RNA.323-201ENST00000365157 109 ntBASIC4.43□□□□□ -1.7
PRDM9Q9NQV7 RPL37P18-201ENST00000411602 243 ntBASIC4.43□□□□□ -1.7
PRDM9Q9NQV7 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.43□□□□□ -1.7
PRDM9Q9NQV7 AC108751.2-201ENST00000469993 231 ntBASIC4.43□□□□□ -1.7
PRDM9Q9NQV7 IGLV2-34-201ENST00000490007 283 ntBASIC4.43□□□□□ -1.7
PRDM9Q9NQV7 COX6CP6-201ENST00000490840 228 ntBASIC4.43□□□□□ -1.7
PRDM9Q9NQV7 AC010598.1-201ENST00000510378 103 ntBASIC4.43□□□□□ -1.7
PRDM9Q9NQV7 RNA5SP281-201ENST00000516504 135 ntBASIC4.43□□□□□ -1.7
PRDM9Q9NQV7 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.43□□□□□ -1.7
PRDM9Q9NQV7 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.43□□□□□ -1.7
PRDM9Q9NQV7 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.43□□□□□ -1.7
PRDM9Q9NQV7 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.43□□□□□ -1.7
PRDM9Q9NQV7 AC105129.1-201ENST00000560250 297 ntBASIC4.43□□□□□ -1.7
PRDM9Q9NQV7 MIR6780A-201ENST00000615089 68 ntBASIC4.43□□□□□ -1.7
PRDM9Q9NQV7 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
PRDM9Q9NQV7 AL596211.1-201ENST00000569873 2277 ntBASIC4.43□□□□□ -1.7
PRDM9Q9NQV7 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
PRDM9Q9NQV7 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.42□□□□□ -1.7
PRDM9Q9NQV7 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
PRDM9Q9NQV7 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PRDM9Q9NQV7 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
PRDM9Q9NQV7 AC006971.1-201ENST00000407916 4486 ntBASIC4.42□□□□□ -1.7
PRDM9Q9NQV7 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PRDM9Q9NQV7 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
PRDM9Q9NQV7 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PRDM9Q9NQV7 RNA5SP443-201ENST00000363083 132 ntBASIC4.42□□□□□ -1.7
PRDM9Q9NQV7 SNORA51.4-201ENST00000364993 124 ntBASIC4.42□□□□□ -1.7
PRDM9Q9NQV7 AL139095.1-201ENST00000404326 391 ntBASIC4.42□□□□□ -1.7
PRDM9Q9NQV7 MIR1263-201ENST00000408324 86 ntBASIC4.42□□□□□ -1.7
PRDM9Q9NQV7 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.42□□□□□ -1.7
PRDM9Q9NQV7 AL590139.1-201ENST00000416267 400 ntBASIC4.42□□□□□ -1.7
PRDM9Q9NQV7 RPS29P22-201ENST00000472363 168 ntBASIC4.42□□□□□ -1.7
PRDM9Q9NQV7 RN7SKP43-201ENST00000516173 320 ntBASIC4.42□□□□□ -1.7
PRDM9Q9NQV7 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PRDM9Q9NQV7 TRAV8-5-201ENST00000537369 341 ntBASIC4.42□□□□□ -1.7
PRDM9Q9NQV7 AC062037.1-201ENST00000605302 128 ntBASIC4.42□□□□□ -1.7
PRDM9Q9NQV7 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC4.42□□□□□ -1.7
PRDM9Q9NQV7 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PRDM9Q9NQV7 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PRDM9Q9NQV7 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PRDM9Q9NQV7 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.42□□□□□ -1.7
PRDM9Q9NQV7 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PRDM9Q9NQV7 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PRDM9Q9NQV7 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.42□□□□□ -1.7
PRDM9Q9NQV7 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.42□□□□□ -1.7
PRDM9Q9NQV7 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.42□□□□□ -1.7
PRDM9Q9NQV7 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PRDM9Q9NQV7 AC000403.1-201ENST00000613696 3585 ntBASIC4.42□□□□□ -1.7
PRDM9Q9NQV7 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
PRDM9Q9NQV7 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRDM9Q9NQV7 AL356292.1-201ENST00000283110 373 ntBASIC4.41□□□□□ -1.7
PRDM9Q9NQV7 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.41□□□□□ -1.7
PRDM9Q9NQV7 RNU6-1014P-201ENST00000383940 103 ntBASIC4.41□□□□□ -1.7
PRDM9Q9NQV7 MIR708-201ENST00000390708 88 ntBASIC4.41□□□□□ -1.7
PRDM9Q9NQV7 RN7SKP216-201ENST00000411050 312 ntBASIC4.41□□□□□ -1.7
PRDM9Q9NQV7 CALM2P4-201ENST00000430810 426 ntBASIC4.41□□□□□ -1.7
PRDM9Q9NQV7 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4.41□□□□□ -1.7
PRDM9Q9NQV7 AL353705.1-201ENST00000433468 480 ntBASIC4.41□□□□□ -1.7
PRDM9Q9NQV7 AC073264.2-201ENST00000448886 166 ntBASIC4.41□□□□□ -1.7
PRDM9Q9NQV7 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.41□□□□□ -1.7
PRDM9Q9NQV7 AC010618.1-201ENST00000469924 477 ntBASIC4.41□□□□□ -1.7
PRDM9Q9NQV7 AC078817.1-201ENST00000492623 435 ntBASIC4.41□□□□□ -1.7
PRDM9Q9NQV7 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.41□□□□□ -1.7
PRDM9Q9NQV7 AC015912.2-201ENST00000571053 181 ntBASIC4.41□□□□□ -1.7
PRDM9Q9NQV7 RN7SL690P-201ENST00000582087 240 ntBASIC4.41□□□□□ -1.7
PRDM9Q9NQV7 AL020997.2-201ENST00000602607 184 ntBASIC4.41□□□□□ -1.7
PRDM9Q9NQV7 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.41□□□□□ -1.7
PRDM9Q9NQV7 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRDM9Q9NQV7 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PRDM9Q9NQV7 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PRDM9Q9NQV7 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.41□□□□□ -1.7
PRDM9Q9NQV7 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PRDM9Q9NQV7 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms