Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 MTND5P9-201ENST00000503854 1755 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 RNU1-72P-201ENST00000362976 153 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 RNU6-968P-201ENST00000384076 107 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 SNORA36A-201ENST00000384221 132 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 RNU6-310P-201ENST00000384655 107 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 MIR592-201ENST00000384959 97 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
HINT3Q9NQE9 RNY4P36-201ENST00000391116 96 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 RPL21P75-201ENST00000396599 483 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 RPL21P28-201ENST00000401418 483 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 MTCYBP4-201ENST00000401524 249 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 CBX3P9-201ENST00000402326 552 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 Y_RNA.646-201ENST00000410980 101 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 RNA5SP492-201ENST00000411330 114 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 USMG5P1-201ENST00000425964 177 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 AC236972.2-201ENST00000434979 310 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.47□□□□□ -2.01
HINT3Q9NQE9 UBBP3-201ENST00000445497 241 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.47□□□□□ -2.01
HINT3Q9NQE9 AC080013.2-201ENST00000460866 323 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 RPL21P39-201ENST00000463605 483 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 RPS29P26-201ENST00000477483 171 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 AC090525.1-201ENST00000479116 478 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 AC087190.1-201ENST00000484462 480 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 AC093591.1-201ENST00000491435 481 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 RPL21P16-201ENST00000495531 483 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.47□□□□□ -2.01
HINT3Q9NQE9 HMGB1P35-201ENST00000503360 598 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 AC022447.4-201ENST00000504053 364 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 RNA5SP384-201ENST00000516615 116 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 SCARNA13-201ENST00000516672 275 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 SNORA31.16-201ENST00000516773 139 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.47□□□□□ -2.01
HINT3Q9NQE9 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.47□□□□□ -2.01
HINT3Q9NQE9 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.47□□□□□ -2.01
HINT3Q9NQE9 AC016256.1-201ENST00000547971 354 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.47□□□□□ -2.01
HINT3Q9NQE9 EIF4BP1-201ENST00000554881 351 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 MIR5696-201ENST00000578474 85 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.47□□□□□ -2.01
HINT3Q9NQE9 MIR3117-201ENST00000584034 78 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 AC060766.3-201ENST00000591442 263 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 AL356280.1-201ENST00000603614 379 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 HMGB1P24-202ENST00000615653 685 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 SNORD98-201ENST00000636377 67 ntBASIC2.47□□□□□ -2.01
HINT3Q9NQE9 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.47□□□□□ -2.01
HINT3Q9NQE9 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
HINT3Q9NQE9 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
HINT3Q9NQE9 Y_RNA.48-201ENST00000362710 103 ntBASIC2.46□□□□□ -2.02
HINT3Q9NQE9 RNU6-1180P-201ENST00000364935 107 ntBASIC2.46□□□□□ -2.02
HINT3Q9NQE9 RNU6-1286P-201ENST00000383871 107 ntBASIC2.46□□□□□ -2.02
HINT3Q9NQE9 Y_RNA.533-201ENST00000384596 114 ntBASIC2.46□□□□□ -2.02
HINT3Q9NQE9 RNU6-331P-201ENST00000384724 107 ntBASIC2.46□□□□□ -2.02
HINT3Q9NQE9 MTCO2P27-201ENST00000420740 428 ntBASIC2.46□□□□□ -2.02
HINT3Q9NQE9 AL139132.1-201ENST00000431587 344 ntBASIC2.46□□□□□ -2.02
HINT3Q9NQE9 AC107083.1-201ENST00000439643 279 ntBASIC2.46□□□□□ -2.02
HINT3Q9NQE9 AL513124.1-201ENST00000450410 614 ntBASIC2.46□□□□□ -2.02
HINT3Q9NQE9 RPL30P15-201ENST00000457129 321 ntBASIC2.46□□□□□ -2.02
HINT3Q9NQE9 Y_RNA.653-201ENST00000459091 95 ntBASIC2.46□□□□□ -2.02
HINT3Q9NQE9 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.46□□□□□ -2.02
HINT3Q9NQE9 AC097473.1-201ENST00000508142 408 ntBASIC2.46□□□□□ -2.02
HINT3Q9NQE9 RNA5SP367-201ENST00000516557 118 ntBASIC2.46□□□□□ -2.02
HINT3Q9NQE9 AC021231.3-201ENST00000558497 370 ntBASIC2.46□□□□□ -2.02
HINT3Q9NQE9 MIR5571-201ENST00000577998 113 ntBASIC2.46□□□□□ -2.02
HINT3Q9NQE9 MIR3136-201ENST00000583498 78 ntBASIC2.46□□□□□ -2.02
HINT3Q9NQE9 MIR3616-201ENST00000584070 92 ntBASIC2.46□□□□□ -2.02
HINT3Q9NQE9 AL158827.2-201ENST00000602494 330 ntBASIC2.46□□□□□ -2.02
HINT3Q9NQE9 AL078605.1-201ENST00000603529 500 ntBASIC2.46□□□□□ -2.02
HINT3Q9NQE9 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.46□□□□□ -2.02
HINT3Q9NQE9 AC084781.2-201ENST00000615568 161 ntBASIC2.46□□□□□ -2.02
HINT3Q9NQE9 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.46□□□□□ -2.02
HINT3Q9NQE9 AL691447.3-201ENST00000635020 330 ntBASIC2.46□□□□□ -2.02
HINT3Q9NQE9 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
HINT3Q9NQE9 MTND4P29-201ENST00000503122 1372 ntBASIC2.46□□□□□ -2.02
HINT3Q9NQE9 AC233981.2-201ENST00000611524 1614 ntBASIC2.46□□□□□ -2.02
HINT3Q9NQE9 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.46□□□□□ -2.02
HINT3Q9NQE9 SNORA29-201ENST00000384183 140 ntBASIC2.45□□□□□ -2.02
HINT3Q9NQE9 RNU6-220P-201ENST00000390919 107 ntBASIC2.45□□□□□ -2.02
HINT3Q9NQE9 FO393413.1-201ENST00000402892 195 ntBASIC2.45□□□□□ -2.02
HINT3Q9NQE9 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.45□□□□□ -2.02
HINT3Q9NQE9 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.45□□□□□ -2.02
HINT3Q9NQE9 AC092427.1-202ENST00000430569 476 ntBASIC2.45□□□□□ -2.02
HINT3Q9NQE9 AC112220.1-201ENST00000434628 355 ntBASIC2.45□□□□□ -2.02
HINT3Q9NQE9 AL445687.1-201ENST00000439946 251 ntBASIC2.45□□□□□ -2.02
HINT3Q9NQE9 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.45□□□□□ -2.02
HINT3Q9NQE9 AL353752.1-201ENST00000454946 260 ntBASIC2.45□□□□□ -2.02
HINT3Q9NQE9 MTCO3P10-201ENST00000455912 772 ntBASIC2.45□□□□□ -2.02
HINT3Q9NQE9 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.45□□□□□ -2.02
HINT3Q9NQE9 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.45□□□□□ -2.02
HINT3Q9NQE9 SCARNA16.2-201ENST00000516520 172 ntBASIC2.45□□□□□ -2.02
HINT3Q9NQE9 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.45□□□□□ -2.02
HINT3Q9NQE9 CBX3P8-201ENST00000532412 525 ntBASIC2.45□□□□□ -2.02
HINT3Q9NQE9 AC093249.1-201ENST00000567049 203 ntBASIC2.45□□□□□ -2.02
HINT3Q9NQE9 AL034555.1-201ENST00000604816 211 ntBASIC2.45□□□□□ -2.02
HINT3Q9NQE9 MIR7106-201ENST00000612419 65 ntBASIC2.45□□□□□ -2.02
HINT3Q9NQE9 AC126177.8-201ENST00000618339 1015 ntBASIC2.45□□□□□ -2.02
HINT3Q9NQE9 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
HINT3Q9NQE9 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
HINT3Q9NQE9 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 163.8 ms