Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC009161.2-201ENST00000624626 138 ntBASIC1.71□□□□□ -2.14
TM9SF3Q9HD45 AC090582.1-201ENST00000636321 199 ntBASIC1.71□□□□□ -2.14
TM9SF3Q9HD45 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
TM9SF3Q9HD45 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
TM9SF3Q9HD45 ZNF680P1-201ENST00000436625 1469 ntBASIC1.7□□□□□ -2.14
TM9SF3Q9HD45 snoU2_19.1-201ENST00000362361 80 ntBASIC1.7□□□□□ -2.14
TM9SF3Q9HD45 RNU4-48P-201ENST00000365559 182 ntBASIC1.7□□□□□ -2.14
TM9SF3Q9HD45 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.7□□□□□ -2.14
TM9SF3Q9HD45 RNU6-321P-201ENST00000410912 106 ntBASIC1.7□□□□□ -2.14
TM9SF3Q9HD45 RNU6-607P-201ENST00000411283 108 ntBASIC1.7□□□□□ -2.14
TM9SF3Q9HD45 RNU6-387P-201ENST00000411331 105 ntBASIC1.7□□□□□ -2.14
TM9SF3Q9HD45 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.7□□□□□ -2.14
TM9SF3Q9HD45 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.7□□□□□ -2.14
TM9SF3Q9HD45 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.7□□□□□ -2.14
TM9SF3Q9HD45 MTCYBP8-201ENST00000422855 651 ntBASIC1.7□□□□□ -2.14
TM9SF3Q9HD45 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.7□□□□□ -2.14
TM9SF3Q9HD45 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.7□□□□□ -2.14
TM9SF3Q9HD45 TPT1P7-201ENST00000458300 517 ntBASIC1.7□□□□□ -2.14
TM9SF3Q9HD45 MTND2P33-201ENST00000506452 1031 ntBASIC1.7□□□□□ -2.14
TM9SF3Q9HD45 MTCYBP40-201ENST00000509390 1135 ntBASIC1.7□□□□□ -2.14
TM9SF3Q9HD45 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.7□□□□□ -2.14
TM9SF3Q9HD45 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.7□□□□□ -2.14
TM9SF3Q9HD45 AC074344.1-201ENST00000512823 224 ntBASIC1.7□□□□□ -2.14
TM9SF3Q9HD45 Y_RNA.688-201ENST00000516565 95 ntBASIC1.7□□□□□ -2.14
TM9SF3Q9HD45 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.7□□□□□ -2.14
TM9SF3Q9HD45 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.7□□□□□ -2.14
TM9SF3Q9HD45 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.7□□□□□ -2.14
TM9SF3Q9HD45 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.7□□□□□ -2.14
TM9SF3Q9HD45 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.7□□□□□ -2.14
TM9SF3Q9HD45 MTATP6P3-201ENST00000581686 676 ntBASIC1.7□□□□□ -2.14
TM9SF3Q9HD45 AC078795.2-201ENST00000602835 1252 ntBASIC1.7□□□□□ -2.14
TM9SF3Q9HD45 AL391646.1-201ENST00000603860 190 ntBASIC1.7□□□□□ -2.14
TM9SF3Q9HD45 AC008945.2-201ENST00000606056 604 ntBASIC1.7□□□□□ -2.14
TM9SF3Q9HD45 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.7□□□□□ -2.14
TM9SF3Q9HD45 RMST_4.1-201ENST00000616886 107 ntBASIC1.7□□□□□ -2.14
TM9SF3Q9HD45 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.7□□□□□ -2.14
TM9SF3Q9HD45 SNORD48-201ENST00000364953 64 ntBASIC1.69□□□□□ -2.14
TM9SF3Q9HD45 Y_RNA.324-201ENST00000365165 102 ntBASIC1.69□□□□□ -2.14
TM9SF3Q9HD45 RNU6-1127P-201ENST00000384580 107 ntBASIC1.69□□□□□ -2.14
TM9SF3Q9HD45 RNY3P9-201ENST00000384727 106 ntBASIC1.69□□□□□ -2.14
TM9SF3Q9HD45 SNORA16.2-201ENST00000390991 127 ntBASIC1.69□□□□□ -2.14
TM9SF3Q9HD45 SNORD70.1-201ENST00000391007 85 ntBASIC1.69□□□□□ -2.14
TM9SF3Q9HD45 DEFB108C-201ENST00000400154 252 ntBASIC1.69□□□□□ -2.14
TM9SF3Q9HD45 RPS20P15-201ENST00000412792 311 ntBASIC1.69□□□□□ -2.14
TM9SF3Q9HD45 BTF3L4P1-201ENST00000413813 468 ntBASIC1.69□□□□□ -2.14
TM9SF3Q9HD45 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.69□□□□□ -2.14
TM9SF3Q9HD45 RPL30P1-201ENST00000488676 339 ntBASIC1.69□□□□□ -2.14
TM9SF3Q9HD45 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.69□□□□□ -2.14
TM9SF3Q9HD45 AC093259.1-201ENST00000509755 300 ntBASIC1.69□□□□□ -2.14
TM9SF3Q9HD45 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.69□□□□□ -2.14
TM9SF3Q9HD45 MTCO2P4-201ENST00000517968 247 ntBASIC1.69□□□□□ -2.14
TM9SF3Q9HD45 AP005435.4-201ENST00000529514 284 ntBASIC1.69□□□□□ -2.14
TM9SF3Q9HD45 AL356057.1-201ENST00000533798 831 ntBASIC1.69□□□□□ -2.14
TM9SF3Q9HD45 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.69□□□□□ -2.14
TM9SF3Q9HD45 MTND1P15-201ENST00000579262 949 ntBASIC1.69□□□□□ -2.14
TM9SF3Q9HD45 MIR3618-201ENST00000580330 88 ntBASIC1.69□□□□□ -2.14
TM9SF3Q9HD45 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.69□□□□□ -2.14
TM9SF3Q9HD45 RN7SKP299-201ENST00000606679 301 ntBASIC1.69□□□□□ -2.14
TM9SF3Q9HD45 AC104073.3-201ENST00000610942 955 ntBASIC1.69□□□□□ -2.14
TM9SF3Q9HD45 AC072046.2-201ENST00000618366 268 ntBASIC1.69□□□□□ -2.14
TM9SF3Q9HD45 AC009509.4-201ENST00000619202 509 ntBASIC1.69□□□□□ -2.14
TM9SF3Q9HD45 AC130454.1-201ENST00000622948 401 ntBASIC1.69□□□□□ -2.14
TM9SF3Q9HD45 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.69□□□□□ -2.14
TM9SF3Q9HD45 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.69□□□□□ -2.14
TM9SF3Q9HD45 Y_RNA.226-201ENST00000364337 114 ntBASIC1.68□□□□□ -2.14
TM9SF3Q9HD45 RNU5E-7P-201ENST00000365290 117 ntBASIC1.68□□□□□ -2.14
TM9SF3Q9HD45 RNU6-160P-201ENST00000384591 107 ntBASIC1.68□□□□□ -2.14
TM9SF3Q9HD45 SNORA48.1-201ENST00000390879 135 ntBASIC1.68□□□□□ -2.14
TM9SF3Q9HD45 Y_RNA.597-201ENST00000410463 100 ntBASIC1.68□□□□□ -2.14
TM9SF3Q9HD45 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
TM9SF3Q9HD45 MTATP6P18-201ENST00000417994 673 ntBASIC1.68□□□□□ -2.14
TM9SF3Q9HD45 NCOR1P3-201ENST00000420479 303 ntBASIC1.68□□□□□ -2.14
TM9SF3Q9HD45 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.68□□□□□ -2.14
TM9SF3Q9HD45 AL353193.1-201ENST00000421444 268 ntBASIC1.68□□□□□ -2.14
TM9SF3Q9HD45 IFNA20P-201ENST00000436840 528 ntBASIC1.68□□□□□ -2.14
TM9SF3Q9HD45 MTND1P18-201ENST00000448191 573 ntBASIC1.68□□□□□ -2.14
TM9SF3Q9HD45 AL353752.1-201ENST00000454946 260 ntBASIC1.68□□□□□ -2.14
TM9SF3Q9HD45 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.68□□□□□ -2.14
TM9SF3Q9HD45 AL163540.1-201ENST00000485382 386 ntBASIC1.68□□□□□ -2.14
TM9SF3Q9HD45 AC079140.3-201ENST00000511111 550 ntBASIC1.68□□□□□ -2.14
TM9SF3Q9HD45 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
TM9SF3Q9HD45 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.68□□□□□ -2.14
TM9SF3Q9HD45 AC073648.5-201ENST00000603502 305 ntBASIC1.68□□□□□ -2.14
TM9SF3Q9HD45 AC016925.2-201ENST00000605108 242 ntBASIC1.68□□□□□ -2.14
TM9SF3Q9HD45 AL359821.1-201ENST00000605519 182 ntBASIC1.68□□□□□ -2.14
TM9SF3Q9HD45 AC002044.1-201ENST00000606707 158 ntBASIC1.68□□□□□ -2.14
TM9SF3Q9HD45 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
TM9SF3Q9HD45 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.68□□□□□ -2.14
TM9SF3Q9HD45 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
TM9SF3Q9HD45 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.67□□□□□ -2.14
TM9SF3Q9HD45 RNU6-428P-201ENST00000362942 107 ntBASIC1.67□□□□□ -2.14
TM9SF3Q9HD45 Y_RNA.77-201ENST00000362962 107 ntBASIC1.67□□□□□ -2.14
TM9SF3Q9HD45 RNU6-23P-201ENST00000363283 107 ntBASIC1.67□□□□□ -2.14
TM9SF3Q9HD45 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
TM9SF3Q9HD45 RPS15AP10-201ENST00000432472 382 ntBASIC1.67□□□□□ -2.14
TM9SF3Q9HD45 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.67□□□□□ -2.14
TM9SF3Q9HD45 AC098826.2-201ENST00000452011 651 ntBASIC1.67□□□□□ -2.14
TM9SF3Q9HD45 AL122001.1-201ENST00000457027 370 ntBASIC1.67□□□□□ -2.14
TM9SF3Q9HD45 SCARNA18-201ENST00000459004 134 ntBASIC1.67□□□□□ -2.14
TM9SF3Q9HD45 MTCO3P7-201ENST00000510008 774 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms