Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
SND1-IT1Q9HBX3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 AL390237.1-201ENST00000404226 1415 ntBASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 Y_RNA.67-201ENST00000362870 100 ntBASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 RNU6-414P-201ENST00000363705 104 ntBASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 RNU6-296P-201ENST00000384608 107 ntBASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 MIR9-3-201ENST00000385084 90 ntBASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 SNORA3.2-201ENST00000408221 125 ntBASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 MIR1267-201ENST00000408723 78 ntBASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 MTCO1P21-201ENST00000416634 589 ntBASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 BX295541.1-201ENST00000417774 250 ntBASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 AC139712.2-201ENST00000424302 339 ntBASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 FTH1P12-201ENST00000432137 551 ntBASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 AL445567.1-201ENST00000439121 144 ntBASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 AC244505.5-201ENST00000443639 207 ntBASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 AC245517.4-201ENST00000448601 281 ntBASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 MTND1P27-201ENST00000451117 902 ntBASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 RPS27AP8-201ENST00000452665 445 ntBASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 C1DP4-201ENST00000455429 424 ntBASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 SNRPFP3-201ENST00000457792 225 ntBASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 AC008628.2-201ENST00000502605 298 ntBASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 AC016256.1-201ENST00000547971 354 ntBASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 AC110588.1-201ENST00000559699 137 ntBASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 AC012414.6-201ENST00000568241 401 ntBASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 MIR3913-1-201ENST00000577744 102 ntBASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 AC009994.1-201ENST00000606889 253 ntBASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 AC064807.4-201ENST00000607201 407 ntBASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 AC068944.2-201ENST00000610373 403 ntBASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 U2.17-201ENST00000611454 95 ntBASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 AC087241.4-201ENST00000612441 480 ntBASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 AL590808.1-201ENST00000618696 141 ntBASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 AL450472.1-202ENST00000637286 180 ntBASIC1.09□□□□□ -2.23
SND1-IT1Q9HBX3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.24
SND1-IT1Q9HBX3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
SND1-IT1Q9HBX3 RNU6-1120P-201ENST00000362988 108 ntBASIC1.08□□□□□ -2.24
SND1-IT1Q9HBX3 Y_RNA.255-201ENST00000364581 97 ntBASIC1.08□□□□□ -2.24
SND1-IT1Q9HBX3 RNU6-517P-201ENST00000384362 110 ntBASIC1.08□□□□□ -2.24
SND1-IT1Q9HBX3 MIR520A-201ENST00000384862 85 ntBASIC1.08□□□□□ -2.24
SND1-IT1Q9HBX3 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.08□□□□□ -2.24
SND1-IT1Q9HBX3 EBAG9P1-201ENST00000418955 543 ntBASIC1.08□□□□□ -2.24
SND1-IT1Q9HBX3 SNRPEP8-201ENST00000442866 260 ntBASIC1.08□□□□□ -2.24
SND1-IT1Q9HBX3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.08□□□□□ -2.24
SND1-IT1Q9HBX3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SND1-IT1Q9HBX3 AC007395.1-201ENST00000451333 677 ntBASIC1.08□□□□□ -2.24
SND1-IT1Q9HBX3 TOMM22P6-201ENST00000465035 409 ntBASIC1.08□□□□□ -2.24
SND1-IT1Q9HBX3 AC005908.1-201ENST00000468701 347 ntBASIC1.08□□□□□ -2.24
SND1-IT1Q9HBX3 HMGN1P13-201ENST00000505795 138 ntBASIC1.08□□□□□ -2.24
SND1-IT1Q9HBX3 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.08□□□□□ -2.24
SND1-IT1Q9HBX3 RNA5SP445-201ENST00000515889 115 ntBASIC1.08□□□□□ -2.24
SND1-IT1Q9HBX3 RNA5SP182-201ENST00000516064 82 ntBASIC1.08□□□□□ -2.24
SND1-IT1Q9HBX3 RNU5F-4P-201ENST00000516581 114 ntBASIC1.08□□□□□ -2.24
SND1-IT1Q9HBX3 RN7SKP219-201ENST00000516825 296 ntBASIC1.08□□□□□ -2.24
SND1-IT1Q9HBX3 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.08□□□□□ -2.24
SND1-IT1Q9HBX3 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
SND1-IT1Q9HBX3 AP003034.1-201ENST00000534621 422 ntBASIC1.08□□□□□ -2.24
SND1-IT1Q9HBX3 AC103996.1-201ENST00000555468 102 ntBASIC1.08□□□□□ -2.24
SND1-IT1Q9HBX3 SUB1P2-201ENST00000556401 297 ntBASIC1.08□□□□□ -2.24
SND1-IT1Q9HBX3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.08□□□□□ -2.24
SND1-IT1Q9HBX3 MIR5094-201ENST00000578766 85 ntBASIC1.08□□□□□ -2.24
SND1-IT1Q9HBX3 MIR4672-201ENST00000583126 81 ntBASIC1.08□□□□□ -2.24
SND1-IT1Q9HBX3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
SND1-IT1Q9HBX3 uc_338.5-201ENST00000611839 155 ntBASIC1.08□□□□□ -2.24
SND1-IT1Q9HBX3 AC064859.1-201ENST00000624741 174 ntBASIC1.08□□□□□ -2.24
SND1-IT1Q9HBX3 AC005609.4-201ENST00000625071 447 ntBASIC1.08□□□□□ -2.24
SND1-IT1Q9HBX3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.08□□□□□ -2.24
SND1-IT1Q9HBX3 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
SND1-IT1Q9HBX3 RNU6-1026P-201ENST00000384465 108 ntBASIC1.07□□□□□ -2.24
SND1-IT1Q9HBX3 Y_RNA.504-201ENST00000384481 104 ntBASIC1.07□□□□□ -2.24
SND1-IT1Q9HBX3 RNU1-78P-201ENST00000391248 165 ntBASIC1.07□□□□□ -2.24
SND1-IT1Q9HBX3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
SND1-IT1Q9HBX3 RNU2-41P-201ENST00000410991 178 ntBASIC1.07□□□□□ -2.24
SND1-IT1Q9HBX3 RN7SKP101-201ENST00000411376 320 ntBASIC1.07□□□□□ -2.24
SND1-IT1Q9HBX3 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.07□□□□□ -2.24
SND1-IT1Q9HBX3 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.07□□□□□ -2.24
SND1-IT1Q9HBX3 MTATP6P18-201ENST00000417994 673 ntBASIC1.07□□□□□ -2.24
SND1-IT1Q9HBX3 RPL21P111-201ENST00000418453 477 ntBASIC1.07□□□□□ -2.24
SND1-IT1Q9HBX3 MTCO2P34-201ENST00000421994 607 ntBASIC1.07□□□□□ -2.24
SND1-IT1Q9HBX3 MTCO2P3-201ENST00000442543 421 ntBASIC1.07□□□□□ -2.24
SND1-IT1Q9HBX3 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.07□□□□□ -2.24
SND1-IT1Q9HBX3 AC132479.1-201ENST00000449160 144 ntBASIC1.07□□□□□ -2.24
SND1-IT1Q9HBX3 ATP5J2P3-201ENST00000451550 258 ntBASIC1.07□□□□□ -2.24
SND1-IT1Q9HBX3 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.07□□□□□ -2.24
SND1-IT1Q9HBX3 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.07□□□□□ -2.24
SND1-IT1Q9HBX3 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms