Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 snoU109.2-201ENST00000459316 135 ntBASIC0.48□□□□□ -2.33
LRTM1Q9HBL6 RPS27P22-201ENST00000478056 241 ntBASIC0.48□□□□□ -2.33
LRTM1Q9HBL6 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.48□□□□□ -2.33
LRTM1Q9HBL6 AC074344.1-201ENST00000512823 224 ntBASIC0.48□□□□□ -2.33
LRTM1Q9HBL6 DEFB130C-202ENST00000530001 230 ntBASIC0.48□□□□□ -2.33
LRTM1Q9HBL6 AC091135.1-201ENST00000585943 307 ntBASIC0.48□□□□□ -2.33
LRTM1Q9HBL6 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
LRTM1Q9HBL6 AC068790.6-201ENST00000602558 258 ntBASIC0.48□□□□□ -2.33
LRTM1Q9HBL6 MIR412-201ENST00000362142 91 ntBASIC0.47□□□□□ -2.33
LRTM1Q9HBL6 SNORD32B-201ENST00000364460 84 ntBASIC0.47□□□□□ -2.33
LRTM1Q9HBL6 Y_RNA.274-201ENST00000364714 101 ntBASIC0.47□□□□□ -2.33
LRTM1Q9HBL6 BTF3L4P1-201ENST00000413813 468 ntBASIC0.47□□□□□ -2.33
LRTM1Q9HBL6 AC114482.1-201ENST00000418010 247 ntBASIC0.47□□□□□ -2.33
LRTM1Q9HBL6 MTCO3P29-201ENST00000432119 779 ntBASIC0.47□□□□□ -2.33
LRTM1Q9HBL6 EEF1E1P1-201ENST00000446998 430 ntBASIC0.47□□□□□ -2.33
LRTM1Q9HBL6 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.47□□□□□ -2.33
LRTM1Q9HBL6 AL139824.2-201ENST00000458731 1095 ntBASIC0.47□□□□□ -2.33
LRTM1Q9HBL6 HMGN1P10-201ENST00000474557 553 ntBASIC0.47□□□□□ -2.33
LRTM1Q9HBL6 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.47□□□□□ -2.33
LRTM1Q9HBL6 RNA5SP285-201ENST00000516619 119 ntBASIC0.47□□□□□ -2.33
LRTM1Q9HBL6 AP003355.1-201ENST00000518956 587 ntBASIC0.47□□□□□ -2.33
LRTM1Q9HBL6 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.47□□□□□ -2.33
LRTM1Q9HBL6 AL132657.2-201ENST00000564417 358 ntBASIC0.47□□□□□ -2.33
LRTM1Q9HBL6 AL353778.1-201ENST00000603149 408 ntBASIC0.47□□□□□ -2.33
LRTM1Q9HBL6 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.47□□□□□ -2.33
LRTM1Q9HBL6 MIR6086-201ENST00000638065 55 ntBASIC0.47□□□□□ -2.33
LRTM1Q9HBL6 RNA5SP499-201ENST00000363982 119 ntBASIC0.46□□□□□ -2.34
LRTM1Q9HBL6 MIR605-201ENST00000385078 83 ntBASIC0.46□□□□□ -2.34
LRTM1Q9HBL6 AL356776.1-201ENST00000406574 447 ntBASIC0.46□□□□□ -2.34
LRTM1Q9HBL6 RPS3AP1-201ENST00000413190 320 ntBASIC0.46□□□□□ -2.34
LRTM1Q9HBL6 MTCO3P41-201ENST00000414801 328 ntBASIC0.46□□□□□ -2.34
LRTM1Q9HBL6 COX6CP10-201ENST00000416832 224 ntBASIC0.46□□□□□ -2.34
LRTM1Q9HBL6 RPS26P5-201ENST00000418544 335 ntBASIC0.46□□□□□ -2.34
LRTM1Q9HBL6 AC063976.4-201ENST00000421971 163 ntBASIC0.46□□□□□ -2.34
LRTM1Q9HBL6 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.46□□□□□ -2.34
LRTM1Q9HBL6 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.46□□□□□ -2.34
LRTM1Q9HBL6 AC099677.2-201ENST00000436385 175 ntBASIC0.46□□□□□ -2.34
LRTM1Q9HBL6 NDUFB1P2-201ENST00000449477 176 ntBASIC0.46□□□□□ -2.34
LRTM1Q9HBL6 MTND2P3-201ENST00000452458 470 ntBASIC0.46□□□□□ -2.34
LRTM1Q9HBL6 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.46□□□□□ -2.34
LRTM1Q9HBL6 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.46□□□□□ -2.34
LRTM1Q9HBL6 SNORA31.4-201ENST00000516049 129 ntBASIC0.46□□□□□ -2.34
LRTM1Q9HBL6 RNU5F-2P-201ENST00000516066 82 ntBASIC0.46□□□□□ -2.34
LRTM1Q9HBL6 AL136520.1-202ENST00000555494 763 ntBASIC0.46□□□□□ -2.34
LRTM1Q9HBL6 AC105129.3-201ENST00000605455 485 ntBASIC0.46□□□□□ -2.34
LRTM1Q9HBL6 MIR3976-201ENST00000606807 139 ntBASIC0.46□□□□□ -2.34
LRTM1Q9HBL6 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.46□□□□□ -2.34
LRTM1Q9HBL6 MIR340-201ENST00000362125 95 ntBASIC0.45□□□□□ -2.34
LRTM1Q9HBL6 RNU6-105P-201ENST00000363909 104 ntBASIC0.45□□□□□ -2.34
LRTM1Q9HBL6 RNU6-777P-201ENST00000364265 104 ntBASIC0.45□□□□□ -2.34
LRTM1Q9HBL6 SNORA75B-201ENST00000384053 137 ntBASIC0.45□□□□□ -2.34
LRTM1Q9HBL6 RNU6-110P-201ENST00000384508 104 ntBASIC0.45□□□□□ -2.34
LRTM1Q9HBL6 SNORD12-201ENST00000391002 90 ntBASIC0.45□□□□□ -2.34
LRTM1Q9HBL6 ARL5AP1-201ENST00000418991 388 ntBASIC0.45□□□□□ -2.34
LRTM1Q9HBL6 AC114737.2-201ENST00000421583 173 ntBASIC0.45□□□□□ -2.34
LRTM1Q9HBL6 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.45□□□□□ -2.34
LRTM1Q9HBL6 AL008629.1-201ENST00000438615 184 ntBASIC0.45□□□□□ -2.34
LRTM1Q9HBL6 AC093899.1-201ENST00000457984 376 ntBASIC0.45□□□□□ -2.34
LRTM1Q9HBL6 SNORD124-201ENST00000459577 104 ntBASIC0.45□□□□□ -2.34
LRTM1Q9HBL6 BET1P1-201ENST00000482276 359 ntBASIC0.45□□□□□ -2.34
LRTM1Q9HBL6 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.45□□□□□ -2.34
LRTM1Q9HBL6 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.45□□□□□ -2.34
LRTM1Q9HBL6 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.45□□□□□ -2.34
LRTM1Q9HBL6 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.45□□□□□ -2.34
LRTM1Q9HBL6 AL355816.2-201ENST00000610049 647 ntBASIC0.45□□□□□ -2.34
LRTM1Q9HBL6 AC104465.1-201ENST00000611365 139 ntBASIC0.45□□□□□ -2.34
LRTM1Q9HBL6 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.45□□□□□ -2.34
LRTM1Q9HBL6 AC073544.1-201ENST00000600110 1595 ntBASIC0.45□□□□□ -2.34
LRTM1Q9HBL6 snoZ40.1-201ENST00000364540 72 ntBASIC0.44□□□□□ -2.34
LRTM1Q9HBL6 RNA5SP259-201ENST00000365541 109 ntBASIC0.44□□□□□ -2.34
LRTM1Q9HBL6 VTRNA1-3-201ENST00000365645 89 ntBASIC0.44□□□□□ -2.34
LRTM1Q9HBL6 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.44□□□□□ -2.34
LRTM1Q9HBL6 MIR10A-201ENST00000385043 110 ntBASIC0.44□□□□□ -2.34
LRTM1Q9HBL6 MIR320C1-201ENST00000408566 88 ntBASIC0.44□□□□□ -2.34
LRTM1Q9HBL6 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.44□□□□□ -2.34
LRTM1Q9HBL6 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.44□□□□□ -2.34
LRTM1Q9HBL6 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.44□□□□□ -2.34
LRTM1Q9HBL6 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.44□□□□□ -2.34
LRTM1Q9HBL6 RNA5SP168-201ENST00000516642 112 ntBASIC0.44□□□□□ -2.34
LRTM1Q9HBL6 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.44□□□□□ -2.34
LRTM1Q9HBL6 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.44□□□□□ -2.34
LRTM1Q9HBL6 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.44□□□□□ -2.34
LRTM1Q9HBL6 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.44□□□□□ -2.34
LRTM1Q9HBL6 MIR4514-201ENST00000581410 57 ntBASIC0.44□□□□□ -2.34
LRTM1Q9HBL6 AC174048.1-201ENST00000603389 144 ntBASIC0.44□□□□□ -2.34
LRTM1Q9HBL6 AL138889.2-201ENST00000603883 242 ntBASIC0.44□□□□□ -2.34
LRTM1Q9HBL6 AC099785.1-201ENST00000605697 437 ntBASIC0.44□□□□□ -2.34
LRTM1Q9HBL6 AL451064.1-201ENST00000607718 471 ntBASIC0.44□□□□□ -2.34
LRTM1Q9HBL6 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC0.44□□□□□ -2.34
LRTM1Q9HBL6 FRG1KP-201ENST00000623592 341 ntBASIC0.44□□□□□ -2.34
LRTM1Q9HBL6 RNU6-862P-201ENST00000362804 105 ntBASIC0.43□□□□□ -2.34
LRTM1Q9HBL6 SNORD56.1-201ENST00000362913 68 ntBASIC0.43□□□□□ -2.34
LRTM1Q9HBL6 RNU6-438P-201ENST00000365561 103 ntBASIC0.43□□□□□ -2.34
LRTM1Q9HBL6 SNORA50A-201ENST00000384225 134 ntBASIC0.43□□□□□ -2.34
LRTM1Q9HBL6 RNA5SP63-201ENST00000391225 112 ntBASIC0.43□□□□□ -2.34
LRTM1Q9HBL6 MTCO1P21-201ENST00000416634 589 ntBASIC0.43□□□□□ -2.34
LRTM1Q9HBL6 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.43□□□□□ -2.34
LRTM1Q9HBL6 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.43□□□□□ -2.34
LRTM1Q9HBL6 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.43□□□□□ -2.34
LRTM1Q9HBL6 SNRPEP8-201ENST00000442866 260 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms