Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 HAUS6P2-201ENST00000433254 2404 ntBASIC2.95□□□□□ -1.94
USP29Q9HBJ7 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.95□□□□□ -1.94
USP29Q9HBJ7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.95□□□□□ -1.94
USP29Q9HBJ7 RNU6-858P-201ENST00000362436 107 ntBASIC2.95□□□□□ -1.94
USP29Q9HBJ7 Y_RNA.123-201ENST00000363338 102 ntBASIC2.95□□□□□ -1.94
USP29Q9HBJ7 RNU6-99P-201ENST00000364721 107 ntBASIC2.95□□□□□ -1.94
USP29Q9HBJ7 RNU1-115P-201ENST00000365329 160 ntBASIC2.95□□□□□ -1.94
USP29Q9HBJ7 RNU6-487P-201ENST00000365430 104 ntBASIC2.95□□□□□ -1.94
USP29Q9HBJ7 Y_RNA.577-201ENST00000384794 101 ntBASIC2.95□□□□□ -1.94
USP29Q9HBJ7 RNU6-750P-201ENST00000390946 107 ntBASIC2.95□□□□□ -1.94
USP29Q9HBJ7 RNA5SP354-201ENST00000391247 136 ntBASIC2.95□□□□□ -1.94
USP29Q9HBJ7 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.95□□□□□ -1.94
USP29Q9HBJ7 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.95□□□□□ -1.94
USP29Q9HBJ7 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.95□□□□□ -1.94
USP29Q9HBJ7 RPL23AP95-201ENST00000426806 265 ntBASIC2.95□□□□□ -1.94
USP29Q9HBJ7 AL160004.2-201ENST00000432935 350 ntBASIC2.95□□□□□ -1.94
USP29Q9HBJ7 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.95□□□□□ -1.94
USP29Q9HBJ7 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
USP29Q9HBJ7 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.95□□□□□ -1.94
USP29Q9HBJ7 AC091874.1-201ENST00000511402 339 ntBASIC2.95□□□□□ -1.94
USP29Q9HBJ7 RNA5SP356-201ENST00000515972 94 ntBASIC2.95□□□□□ -1.94
USP29Q9HBJ7 Y_RNA.661-201ENST00000516003 99 ntBASIC2.95□□□□□ -1.94
USP29Q9HBJ7 RN7SKP282-201ENST00000516824 299 ntBASIC2.95□□□□□ -1.94
USP29Q9HBJ7 CKS1BP7-201ENST00000522230 235 ntBASIC2.95□□□□□ -1.94
USP29Q9HBJ7 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.95□□□□□ -1.94
USP29Q9HBJ7 AC010653.1-201ENST00000571108 881 ntBASIC2.95□□□□□ -1.94
USP29Q9HBJ7 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.95□□□□□ -1.94
USP29Q9HBJ7 AC060766.3-201ENST00000591442 263 ntBASIC2.95□□□□□ -1.94
USP29Q9HBJ7 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.95□□□□□ -1.94
USP29Q9HBJ7 AC019159.1-201ENST00000605094 187 ntBASIC2.95□□□□□ -1.94
USP29Q9HBJ7 AC110079.1-202ENST00000635213 138 ntBASIC2.95□□□□□ -1.94
USP29Q9HBJ7 MIR3529-201ENST00000637713 78 ntBASIC2.95□□□□□ -1.94
USP29Q9HBJ7 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
USP29Q9HBJ7 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
USP29Q9HBJ7 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
USP29Q9HBJ7 AC010889.1-201ENST00000566193 2666 ntBASIC2.95□□□□□ -1.94
USP29Q9HBJ7 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
USP29Q9HBJ7 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
USP29Q9HBJ7 SNORA9.2-201ENST00000365361 133 ntBASIC2.94□□□□□ -1.94
USP29Q9HBJ7 Y_RNA.428-201ENST00000384078 102 ntBASIC2.94□□□□□ -1.94
USP29Q9HBJ7 MIR512-1-201ENST00000384913 84 ntBASIC2.94□□□□□ -1.94
USP29Q9HBJ7 BTF3L4P2-201ENST00000392798 346 ntBASIC2.94□□□□□ -1.94
USP29Q9HBJ7 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.94□□□□□ -1.94
USP29Q9HBJ7 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.94□□□□□ -1.94
USP29Q9HBJ7 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.94□□□□□ -1.94
USP29Q9HBJ7 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.94□□□□□ -1.94
USP29Q9HBJ7 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.94□□□□□ -1.94
USP29Q9HBJ7 AC124916.1-201ENST00000444020 547 ntBASIC2.94□□□□□ -1.94
USP29Q9HBJ7 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.94□□□□□ -1.94
USP29Q9HBJ7 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.94□□□□□ -1.94
USP29Q9HBJ7 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.94□□□□□ -1.94
USP29Q9HBJ7 AC105758.1-201ENST00000506038 399 ntBASIC2.94□□□□□ -1.94
USP29Q9HBJ7 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.94□□□□□ -1.94
USP29Q9HBJ7 SNORD116.3-201ENST00000517176 78 ntBASIC2.94□□□□□ -1.94
USP29Q9HBJ7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
USP29Q9HBJ7 GTF3AP2-201ENST00000557014 266 ntBASIC2.94□□□□□ -1.94
USP29Q9HBJ7 AC023043.3-201ENST00000593113 385 ntBASIC2.94□□□□□ -1.94
USP29Q9HBJ7 AC006157.1-201ENST00000611750 366 ntBASIC2.94□□□□□ -1.94
USP29Q9HBJ7 AC024581.2-201ENST00000619986 252 ntBASIC2.94□□□□□ -1.94
USP29Q9HBJ7 MTND4P1-201ENST00000457501 1466 ntBASIC2.94□□□□□ -1.94
USP29Q9HBJ7 AC108206.1-201ENST00000570186 4159 ntBASIC2.94□□□□□ -1.94
USP29Q9HBJ7 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
USP29Q9HBJ7 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.94□□□□□ -1.94
USP29Q9HBJ7 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
USP29Q9HBJ7 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
USP29Q9HBJ7 RBBP8P1-201ENST00000449447 1844 ntBASIC2.93□□□□□ -1.94
USP29Q9HBJ7 AC092593.1-201ENST00000515413 1815 ntBASIC2.93□□□□□ -1.94
USP29Q9HBJ7 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.93□□□□□ -1.94
USP29Q9HBJ7 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
USP29Q9HBJ7 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.93□□□□□ -1.94
USP29Q9HBJ7 RNU6-639P-201ENST00000384074 107 ntBASIC2.93□□□□□ -1.94
USP29Q9HBJ7 MRPL42P3-201ENST00000401492 326 ntBASIC2.93□□□□□ -1.94
USP29Q9HBJ7 SNORD88.1-201ENST00000408684 91 ntBASIC2.93□□□□□ -1.94
USP29Q9HBJ7 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.93□□□□□ -1.94
USP29Q9HBJ7 AC096649.2-201ENST00000416186 393 ntBASIC2.93□□□□□ -1.94
USP29Q9HBJ7 PTGES3P4-201ENST00000426243 356 ntBASIC2.93□□□□□ -1.94
USP29Q9HBJ7 AC004383.1-201ENST00000438135 289 ntBASIC2.93□□□□□ -1.94
USP29Q9HBJ7 AC099799.1-201ENST00000439809 192 ntBASIC2.93□□□□□ -1.94
USP29Q9HBJ7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.93□□□□□ -1.94
USP29Q9HBJ7 CHEK2P4-201ENST00000450340 246 ntBASIC2.93□□□□□ -1.94
USP29Q9HBJ7 RPS27P26-201ENST00000494583 239 ntBASIC2.93□□□□□ -1.94
USP29Q9HBJ7 AC091826.1-201ENST00000514065 313 ntBASIC2.93□□□□□ -1.94
USP29Q9HBJ7 RNU6-1045P-201ENST00000516321 107 ntBASIC2.93□□□□□ -1.94
USP29Q9HBJ7 RNU4-77P-201ENST00000516692 156 ntBASIC2.93□□□□□ -1.94
USP29Q9HBJ7 AC090897.2-201ENST00000581715 130 ntBASIC2.93□□□□□ -1.94
USP29Q9HBJ7 AL391813.1-201ENST00000603098 260 ntBASIC2.93□□□□□ -1.94
USP29Q9HBJ7 AC092447.9-201ENST00000603395 144 ntBASIC2.93□□□□□ -1.94
USP29Q9HBJ7 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.93□□□□□ -1.94
USP29Q9HBJ7 AL356157.2-201ENST00000605122 111 ntBASIC2.93□□□□□ -1.94
USP29Q9HBJ7 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.93□□□□□ -1.94
USP29Q9HBJ7 SNORA43.4-201ENST00000629559 138 ntBASIC2.93□□□□□ -1.94
USP29Q9HBJ7 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.93□□□□□ -1.94
USP29Q9HBJ7 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
USP29Q9HBJ7 AC009541.1-201ENST00000438279 2662 ntBASIC2.92□□□□□ -1.94
USP29Q9HBJ7 Y_RNA.158-201ENST00000363651 101 ntBASIC2.92□□□□□ -1.94
USP29Q9HBJ7 RNA5SP390-201ENST00000410191 113 ntBASIC2.92□□□□□ -1.94
USP29Q9HBJ7 RNU6-1156P-201ENST00000410365 100 ntBASIC2.92□□□□□ -1.94
USP29Q9HBJ7 AC113618.1-201ENST00000416747 285 ntBASIC2.92□□□□□ -1.94
USP29Q9HBJ7 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.92□□□□□ -1.94
USP29Q9HBJ7 AC105272.1-201ENST00000438604 198 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 158.4 ms