Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 MAPK10-263ENST00000641052 4307 ntBASIC7.9□□□□□ -1.15
SENP3Q9H4L4 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
SENP3Q9H4L4 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
SENP3Q9H4L4 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
SENP3Q9H4L4 RNA5SP467-201ENST00000391274 118 ntBASIC7.89□□□□□ -1.15
SENP3Q9H4L4 HMGN2P8-201ENST00000391458 268 ntBASIC7.89□□□□□ -1.15
SENP3Q9H4L4 MIR1267-201ENST00000408723 78 ntBASIC7.89□□□□□ -1.15
SENP3Q9H4L4 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC7.89□□□□□ -1.15
SENP3Q9H4L4 HMGN2P18-201ENST00000450680 270 ntBASIC7.89□□□□□ -1.15
SENP3Q9H4L4 RNU6-856P-201ENST00000516959 98 ntBASIC7.89□□□□□ -1.15
SENP3Q9H4L4 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC7.89□□□□□ -1.15
SENP3Q9H4L4 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
SENP3Q9H4L4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC7.89□□□□□ -1.15
SENP3Q9H4L4 IGKV2OR2-2-201ENST00000605025 300 ntBASIC7.89□□□□□ -1.15
SENP3Q9H4L4 AC105081.1-201ENST00000617727 106 ntBASIC7.89□□□□□ -1.15
SENP3Q9H4L4 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
SENP3Q9H4L4 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SENP3Q9H4L4 AC006971.1-201ENST00000407916 4486 ntBASIC7.89□□□□□ -1.15
SENP3Q9H4L4 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
SENP3Q9H4L4 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC7.89□□□□□ -1.15
SENP3Q9H4L4 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
SENP3Q9H4L4 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC7.88□□□□□ -1.15
SENP3Q9H4L4 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC7.88□□□□□ -1.15
SENP3Q9H4L4 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC7.88□□□□□ -1.15
SENP3Q9H4L4 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SENP3Q9H4L4 RNA5SP326-201ENST00000363209 110 ntBASIC7.88□□□□□ -1.15
SENP3Q9H4L4 RNU6-342P-201ENST00000384521 104 ntBASIC7.88□□□□□ -1.15
SENP3Q9H4L4 MIR23B-201ENST00000384832 97 ntBASIC7.88□□□□□ -1.15
SENP3Q9H4L4 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.88□□□□□ -1.15
SENP3Q9H4L4 ATP6V0E1P2-201ENST00000441771 245 ntBASIC7.88□□□□□ -1.15
SENP3Q9H4L4 RNU7-181P-201ENST00000517234 74 ntBASIC7.88□□□□□ -1.15
SENP3Q9H4L4 DNAJC19P9-201ENST00000555084 351 ntBASIC7.88□□□□□ -1.15
SENP3Q9H4L4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC7.88□□□□□ -1.15
SENP3Q9H4L4 uc_338.25-201ENST00000613756 156 ntBASIC7.88□□□□□ -1.15
SENP3Q9H4L4 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC7.88□□□□□ -1.15
SENP3Q9H4L4 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
SENP3Q9H4L4 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
SENP3Q9H4L4 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC7.88□□□□□ -1.15
SENP3Q9H4L4 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
SENP3Q9H4L4 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SENP3Q9H4L4 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC7.87□□□□□ -1.15
SENP3Q9H4L4 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SENP3Q9H4L4 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SENP3Q9H4L4 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SENP3Q9H4L4 RNU1-146P-201ENST00000364015 165 ntBASIC7.87□□□□□ -1.15
SENP3Q9H4L4 RNU6-1019P-201ENST00000364424 107 ntBASIC7.87□□□□□ -1.15
SENP3Q9H4L4 SNORD45A-201ENST00000384512 84 ntBASIC7.87□□□□□ -1.15
SENP3Q9H4L4 RNU6-1274P-201ENST00000384557 107 ntBASIC7.87□□□□□ -1.15
SENP3Q9H4L4 MIR942-201ENST00000401111 86 ntBASIC7.87□□□□□ -1.15
SENP3Q9H4L4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC7.87□□□□□ -1.15
SENP3Q9H4L4 HMGB1P40-201ENST00000525121 540 ntBASIC7.87□□□□□ -1.15
SENP3Q9H4L4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC7.87□□□□□ -1.15
SENP3Q9H4L4 AC093249.4-201ENST00000564755 259 ntBASIC7.87□□□□□ -1.15
SENP3Q9H4L4 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC7.87□□□□□ -1.15
SENP3Q9H4L4 AL360270.2-201ENST00000562952 5985 ntBASIC7.87□□□□□ -1.15
SENP3Q9H4L4 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC7.87□□□□□ -1.15
SENP3Q9H4L4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SENP3Q9H4L4 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SENP3Q9H4L4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
SENP3Q9H4L4 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC7.86□□□□□ -1.15
SENP3Q9H4L4 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC7.86□□□□□ -1.15
SENP3Q9H4L4 AC000123.3-201ENST00000624029 4975 ntBASIC7.86□□□□□ -1.15
SENP3Q9H4L4 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
SENP3Q9H4L4 AC010266.2-201ENST00000564741 3255 ntBASIC7.86□□□□□ -1.15
SENP3Q9H4L4 SNORD56.6-201ENST00000384569 71 ntBASIC7.86□□□□□ -1.15
SENP3Q9H4L4 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC7.86□□□□□ -1.15
SENP3Q9H4L4 RNU7-48P-201ENST00000458875 63 ntBASIC7.86□□□□□ -1.15
SENP3Q9H4L4 RN7SL447P-201ENST00000494711 245 ntBASIC7.86□□□□□ -1.15
SENP3Q9H4L4 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC7.86□□□□□ -1.15
SENP3Q9H4L4 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
SENP3Q9H4L4 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
SENP3Q9H4L4 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
SENP3Q9H4L4 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
SENP3Q9H4L4 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
SENP3Q9H4L4 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC7.85□□□□□ -1.15
SENP3Q9H4L4 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
SENP3Q9H4L4 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC7.85□□□□□ -1.15
SENP3Q9H4L4 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
SENP3Q9H4L4 DNM1P47-203ENST00000571780 12667 ntBASIC7.85□□□□□ -1.15
SENP3Q9H4L4 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SENP3Q9H4L4 MIR337-201ENST00000362281 93 ntBASIC7.85□□□□□ -1.15
SENP3Q9H4L4 snoU2-30.2-201ENST00000362805 70 ntBASIC7.85□□□□□ -1.15
SENP3Q9H4L4 Y_RNA.98-201ENST00000363109 102 ntBASIC7.85□□□□□ -1.15
SENP3Q9H4L4 RNVU1-6-201ENST00000364688 164 ntBASIC7.85□□□□□ -1.15
SENP3Q9H4L4 MIR551A-201ENST00000385042 96 ntBASIC7.85□□□□□ -1.15
SENP3Q9H4L4 SNORA48.7-201ENST00000391302 135 ntBASIC7.85□□□□□ -1.15
SENP3Q9H4L4 AC006483.1-201ENST00000487308 313 ntBASIC7.85□□□□□ -1.15
SENP3Q9H4L4 RNU7-35P-201ENST00000517174 62 ntBASIC7.85□□□□□ -1.15
SENP3Q9H4L4 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC7.85□□□□□ -1.15
SENP3Q9H4L4 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
SENP3Q9H4L4 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
SENP3Q9H4L4 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
SENP3Q9H4L4 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SENP3Q9H4L4 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SENP3Q9H4L4 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SENP3Q9H4L4 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SENP3Q9H4L4 DOCK11P1-201ENST00000553480 5932 ntBASIC7.85□□□□□ -1.15
SENP3Q9H4L4 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SENP3Q9H4L4 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
SENP3Q9H4L4 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms