Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 RNA5SP229-201ENST00000410809 99 ntBASIC3.03□□□□□ -1.92
AMBRA1Q9C0C7 RPL32P35-201ENST00000415214 394 ntBASIC3.03□□□□□ -1.92
AMBRA1Q9C0C7 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.03□□□□□ -1.92
AMBRA1Q9C0C7 AC078809.1-201ENST00000427601 140 ntBASIC3.03□□□□□ -1.92
AMBRA1Q9C0C7 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.03□□□□□ -1.92
AMBRA1Q9C0C7 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.03□□□□□ -1.92
AMBRA1Q9C0C7 DYNLT3P2-201ENST00000442517 295 ntBASIC3.03□□□□□ -1.92
AMBRA1Q9C0C7 RPL39P29-201ENST00000447779 157 ntBASIC3.03□□□□□ -1.92
AMBRA1Q9C0C7 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.03□□□□□ -1.92
AMBRA1Q9C0C7 AC008155.2-201ENST00000464337 397 ntBASIC3.03□□□□□ -1.92
AMBRA1Q9C0C7 TOMM22P6-201ENST00000465035 409 ntBASIC3.03□□□□□ -1.92
AMBRA1Q9C0C7 AC093663.1-201ENST00000497190 394 ntBASIC3.03□□□□□ -1.92
AMBRA1Q9C0C7 SNORA31.1-201ENST00000515993 133 ntBASIC3.03□□□□□ -1.92
AMBRA1Q9C0C7 SNORA31.5-201ENST00000516190 133 ntBASIC3.03□□□□□ -1.92
AMBRA1Q9C0C7 MIR2355-201ENST00000517199 87 ntBASIC3.03□□□□□ -1.92
AMBRA1Q9C0C7 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.03□□□□□ -1.92
AMBRA1Q9C0C7 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.03□□□□□ -1.92
AMBRA1Q9C0C7 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.03□□□□□ -1.92
AMBRA1Q9C0C7 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.03□□□□□ -1.92
AMBRA1Q9C0C7 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.03□□□□□ -1.92
AMBRA1Q9C0C7 AC091152.3-201ENST00000604227 325 ntBASIC3.03□□□□□ -1.92
AMBRA1Q9C0C7 RMST_6.1-201ENST00000611980 203 ntBASIC3.03□□□□□ -1.92
AMBRA1Q9C0C7 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.03□□□□□ -1.92
AMBRA1Q9C0C7 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
AMBRA1Q9C0C7 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.93
AMBRA1Q9C0C7 RBBP8P1-201ENST00000449447 1844 ntBASIC3.03□□□□□ -1.93
AMBRA1Q9C0C7 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.02□□□□□ -1.93
AMBRA1Q9C0C7 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
AMBRA1Q9C0C7 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.02□□□□□ -1.93
AMBRA1Q9C0C7 AL353743.1-202ENST00000431724 1695 ntBASIC3.02□□□□□ -1.93
AMBRA1Q9C0C7 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
AMBRA1Q9C0C7 Y_RNA.214-201ENST00000364201 112 ntBASIC3.02□□□□□ -1.93
AMBRA1Q9C0C7 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.02□□□□□ -1.93
AMBRA1Q9C0C7 RNU6-708P-201ENST00000384217 107 ntBASIC3.02□□□□□ -1.93
AMBRA1Q9C0C7 RNU6-17P-201ENST00000384245 107 ntBASIC3.02□□□□□ -1.93
AMBRA1Q9C0C7 RNU6-622P-201ENST00000384272 103 ntBASIC3.02□□□□□ -1.93
AMBRA1Q9C0C7 Y_RNA.504-201ENST00000384481 104 ntBASIC3.02□□□□□ -1.93
AMBRA1Q9C0C7 RNU6-18P-201ENST00000384527 107 ntBASIC3.02□□□□□ -1.93
AMBRA1Q9C0C7 Y_RNA.556-201ENST00000384677 113 ntBASIC3.02□□□□□ -1.93
AMBRA1Q9C0C7 MIR490-201ENST00000384865 128 ntBASIC3.02□□□□□ -1.93
AMBRA1Q9C0C7 MIR32-201ENST00000384965 70 ntBASIC3.02□□□□□ -1.93
AMBRA1Q9C0C7 SNORA48.5-201ENST00000391143 135 ntBASIC3.02□□□□□ -1.93
AMBRA1Q9C0C7 RPL21P1-201ENST00000399532 476 ntBASIC3.02□□□□□ -1.93
AMBRA1Q9C0C7 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.02□□□□□ -1.93
AMBRA1Q9C0C7 RNU6-1077P-201ENST00000410506 102 ntBASIC3.02□□□□□ -1.93
AMBRA1Q9C0C7 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.02□□□□□ -1.93
AMBRA1Q9C0C7 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.02□□□□□ -1.93
AMBRA1Q9C0C7 FCF1P4-201ENST00000448326 183 ntBASIC3.02□□□□□ -1.93
AMBRA1Q9C0C7 RPL30P12-201ENST00000474666 353 ntBASIC3.02□□□□□ -1.93
AMBRA1Q9C0C7 AC016632.1-201ENST00000503994 196 ntBASIC3.02□□□□□ -1.93
AMBRA1Q9C0C7 ANXA2P1-201ENST00000505539 926 ntBASIC3.02□□□□□ -1.93
AMBRA1Q9C0C7 AC109329.1-201ENST00000518744 317 ntBASIC3.02□□□□□ -1.93
AMBRA1Q9C0C7 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.02□□□□□ -1.93
AMBRA1Q9C0C7 AL390123.1-201ENST00000603216 237 ntBASIC3.02□□□□□ -1.93
AMBRA1Q9C0C7 AL355877.2-201ENST00000603670 358 ntBASIC3.02□□□□□ -1.93
AMBRA1Q9C0C7 SNORA43.4-201ENST00000629559 138 ntBASIC3.02□□□□□ -1.93
AMBRA1Q9C0C7 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
AMBRA1Q9C0C7 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
AMBRA1Q9C0C7 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
AMBRA1Q9C0C7 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
AMBRA1Q9C0C7 Y_RNA.27-201ENST00000362540 103 ntBASIC3.01□□□□□ -1.93
AMBRA1Q9C0C7 SNORD115-32-201ENST00000364079 82 ntBASIC3.01□□□□□ -1.93
AMBRA1Q9C0C7 Y_RNA.276-201ENST00000364732 109 ntBASIC3.01□□□□□ -1.93
AMBRA1Q9C0C7 Y_RNA.471-201ENST00000384312 102 ntBASIC3.01□□□□□ -1.93
AMBRA1Q9C0C7 RNU6-505P-201ENST00000384427 107 ntBASIC3.01□□□□□ -1.93
AMBRA1Q9C0C7 Y_RNA.512-201ENST00000384518 102 ntBASIC3.01□□□□□ -1.93
AMBRA1Q9C0C7 RPL21P75-201ENST00000396599 483 ntBASIC3.01□□□□□ -1.93
AMBRA1Q9C0C7 RPL21P28-201ENST00000401418 483 ntBASIC3.01□□□□□ -1.93
AMBRA1Q9C0C7 RN7SKP61-201ENST00000410642 295 ntBASIC3.01□□□□□ -1.93
AMBRA1Q9C0C7 AL590556.1-201ENST00000423231 483 ntBASIC3.01□□□□□ -1.93
AMBRA1Q9C0C7 PTGES3P4-201ENST00000426243 356 ntBASIC3.01□□□□□ -1.93
AMBRA1Q9C0C7 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.01□□□□□ -1.93
AMBRA1Q9C0C7 AL731563.1-201ENST00000442202 214 ntBASIC3.01□□□□□ -1.93
AMBRA1Q9C0C7 GPM6BP3-201ENST00000442797 145 ntBASIC3.01□□□□□ -1.93
AMBRA1Q9C0C7 UQCRHP3-201ENST00000451503 251 ntBASIC3.01□□□□□ -1.93
AMBRA1Q9C0C7 RPL21P39-201ENST00000463605 483 ntBASIC3.01□□□□□ -1.93
AMBRA1Q9C0C7 AC087477.1-201ENST00000465747 340 ntBASIC3.01□□□□□ -1.93
AMBRA1Q9C0C7 AC087190.1-201ENST00000484462 480 ntBASIC3.01□□□□□ -1.93
AMBRA1Q9C0C7 AC107032.1-201ENST00000485945 480 ntBASIC3.01□□□□□ -1.93
AMBRA1Q9C0C7 AC132942.1-201ENST00000486753 483 ntBASIC3.01□□□□□ -1.93
AMBRA1Q9C0C7 AC093591.1-201ENST00000491435 481 ntBASIC3.01□□□□□ -1.93
AMBRA1Q9C0C7 RPL21P16-201ENST00000495531 483 ntBASIC3.01□□□□□ -1.93
AMBRA1Q9C0C7 AL442163.3-201ENST00000554110 156 ntBASIC3.01□□□□□ -1.93
AMBRA1Q9C0C7 AC090617.3-201ENST00000573670 475 ntBASIC3.01□□□□□ -1.93
AMBRA1Q9C0C7 AC090897.2-201ENST00000581715 130 ntBASIC3.01□□□□□ -1.93
AMBRA1Q9C0C7 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.01□□□□□ -1.93
AMBRA1Q9C0C7 MIR8057-201ENST00000620957 69 ntBASIC3.01□□□□□ -1.93
AMBRA1Q9C0C7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
AMBRA1Q9C0C7 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
AMBRA1Q9C0C7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
AMBRA1Q9C0C7 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
AMBRA1Q9C0C7 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3□□□□□ -1.93
AMBRA1Q9C0C7 AC010889.1-201ENST00000566193 2666 ntBASIC3□□□□□ -1.93
AMBRA1Q9C0C7 AC233263.6-201ENST00000631132 1963 ntBASIC3□□□□□ -1.93
AMBRA1Q9C0C7 RNU5B-2P-201ENST00000363036 113 ntBASIC3□□□□□ -1.93
AMBRA1Q9C0C7 RNU6-770P-201ENST00000363929 105 ntBASIC3□□□□□ -1.93
AMBRA1Q9C0C7 RNU6-750P-201ENST00000390946 107 ntBASIC3□□□□□ -1.93
AMBRA1Q9C0C7 ELOCP20-201ENST00000422460 345 ntBASIC3□□□□□ -1.93
AMBRA1Q9C0C7 AC244505.4-201ENST00000434905 287 ntBASIC3□□□□□ -1.93
AMBRA1Q9C0C7 AC244670.1-201ENST00000436879 112 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 168.4 ms