Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.8□□□□□ -2.28
NKX6-2Q9C056 CST2P1-201ENST00000425770 87 ntBASIC0.8□□□□□ -2.28
NKX6-2Q9C056 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC0.8□□□□□ -2.28
NKX6-2Q9C056 AL133217.1-201ENST00000450980 425 ntBASIC0.8□□□□□ -2.28
NKX6-2Q9C056 AC016925.1-201ENST00000458303 298 ntBASIC0.8□□□□□ -2.28
NKX6-2Q9C056 snoU13.27-201ENST00000459278 104 ntBASIC0.8□□□□□ -2.28
NKX6-2Q9C056 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.8□□□□□ -2.28
NKX6-2Q9C056 RNU6-1041P-201ENST00000516254 102 ntBASIC0.8□□□□□ -2.28
NKX6-2Q9C056 AL512310.8-201ENST00000550183 120 ntBASIC0.8□□□□□ -2.28
NKX6-2Q9C056 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC0.8□□□□□ -2.28
NKX6-2Q9C056 AC078795.3-201ENST00000602913 472 ntBASIC0.8□□□□□ -2.28
NKX6-2Q9C056 AC138749.5-201ENST00000611461 208 ntBASIC0.8□□□□□ -2.28
NKX6-2Q9C056 AC116165.2-201ENST00000616705 206 ntBASIC0.8□□□□□ -2.28
NKX6-2Q9C056 AC012676.2-201ENST00000619258 186 ntBASIC0.8□□□□□ -2.28
NKX6-2Q9C056 MIR6852-201ENST00000621699 66 ntBASIC0.8□□□□□ -2.28
NKX6-2Q9C056 AP002371.2-201ENST00000624450 503 ntBASIC0.8□□□□□ -2.28
NKX6-2Q9C056 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.8□□□□□ -2.28
NKX6-2Q9C056 AC099654.13-201ENST00000639774 207 ntBASIC0.8□□□□□ -2.28
NKX6-2Q9C056 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
NKX6-2Q9C056 MTND4P14-201ENST00000435799 1354 ntBASIC0.8□□□□□ -2.28
NKX6-2Q9C056 AL391516.1-201ENST00000554380 2449 ntBASIC0.79□□□□□ -2.28
NKX6-2Q9C056 SNORD31B-201ENST00000364977 69 ntBASIC0.79□□□□□ -2.28
NKX6-2Q9C056 RNU6-715P-201ENST00000365204 103 ntBASIC0.79□□□□□ -2.28
NKX6-2Q9C056 SNORD115-7-201ENST00000365306 82 ntBASIC0.79□□□□□ -2.28
NKX6-2Q9C056 SNORA20.2-201ENST00000383922 131 ntBASIC0.79□□□□□ -2.28
NKX6-2Q9C056 RNU6-550P-201ENST00000391057 101 ntBASIC0.79□□□□□ -2.28
NKX6-2Q9C056 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.79□□□□□ -2.28
NKX6-2Q9C056 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.79□□□□□ -2.28
NKX6-2Q9C056 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.79□□□□□ -2.28
NKX6-2Q9C056 ARL5AP1-201ENST00000418991 388 ntBASIC0.79□□□□□ -2.28
NKX6-2Q9C056 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.79□□□□□ -2.28
NKX6-2Q9C056 AL163195.1-201ENST00000496941 348 ntBASIC0.79□□□□□ -2.28
NKX6-2Q9C056 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.79□□□□□ -2.28
NKX6-2Q9C056 Y_RNA.672-201ENST00000516289 104 ntBASIC0.79□□□□□ -2.28
NKX6-2Q9C056 RNU6-1178P-201ENST00000516674 107 ntBASIC0.79□□□□□ -2.28
NKX6-2Q9C056 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.79□□□□□ -2.28
NKX6-2Q9C056 AC023050.3-201ENST00000541142 333 ntBASIC0.79□□□□□ -2.28
NKX6-2Q9C056 RAB11AP2-201ENST00000545905 639 ntBASIC0.79□□□□□ -2.28
NKX6-2Q9C056 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.79□□□□□ -2.28
NKX6-2Q9C056 MIR3923-201ENST00000579521 83 ntBASIC0.79□□□□□ -2.28
NKX6-2Q9C056 AC005771.1-201ENST00000585581 349 ntBASIC0.79□□□□□ -2.28
NKX6-2Q9C056 AC009977.1-201ENST00000586015 570 ntBASIC0.79□□□□□ -2.28
NKX6-2Q9C056 BNIP3P16-201ENST00000589779 534 ntBASIC0.79□□□□□ -2.28
NKX6-2Q9C056 MTCO2P2-201ENST00000591258 225 ntBASIC0.79□□□□□ -2.28
NKX6-2Q9C056 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.79□□□□□ -2.28
NKX6-2Q9C056 AC013244.2-201ENST00000603396 103 ntBASIC0.79□□□□□ -2.28
NKX6-2Q9C056 MZT1P2-201ENST00000604387 248 ntBASIC0.79□□□□□ -2.28
NKX6-2Q9C056 AC027807.2-201ENST00000616099 408 ntBASIC0.79□□□□□ -2.28
NKX6-2Q9C056 MIR8065-201ENST00000620577 100 ntBASIC0.79□□□□□ -2.28
NKX6-2Q9C056 AP000720.1-201ENST00000625091 483 ntBASIC0.79□□□□□ -2.28
NKX6-2Q9C056 AC007671.2-201ENST00000637344 619 ntBASIC0.79□□□□□ -2.28
NKX6-2Q9C056 RNY1P12-201ENST00000364251 105 ntBASIC0.78□□□□□ -2.28
NKX6-2Q9C056 SNORD32A-201ENST00000364805 84 ntBASIC0.78□□□□□ -2.28
NKX6-2Q9C056 SNORA4.2-201ENST00000365313 147 ntBASIC0.78□□□□□ -2.28
NKX6-2Q9C056 RNU6-378P-201ENST00000384324 107 ntBASIC0.78□□□□□ -2.28
NKX6-2Q9C056 MIR513B-201ENST00000385136 84 ntBASIC0.78□□□□□ -2.28
NKX6-2Q9C056 MIR146A-201ENST00000385201 99 ntBASIC0.78□□□□□ -2.28
NKX6-2Q9C056 AL356776.1-201ENST00000406574 447 ntBASIC0.78□□□□□ -2.28
NKX6-2Q9C056 HIGD1AP15-201ENST00000416198 280 ntBASIC0.78□□□□□ -2.28
NKX6-2Q9C056 CYCSP49-201ENST00000420810 319 ntBASIC0.78□□□□□ -2.28
NKX6-2Q9C056 SNX2P2-201ENST00000424553 323 ntBASIC0.78□□□□□ -2.28
NKX6-2Q9C056 MTCO3P29-201ENST00000432119 779 ntBASIC0.78□□□□□ -2.28
NKX6-2Q9C056 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.78□□□□□ -2.28
NKX6-2Q9C056 AC009474.2-201ENST00000451383 136 ntBASIC0.78□□□□□ -2.28
NKX6-2Q9C056 AC114982.1-201ENST00000469402 321 ntBASIC0.78□□□□□ -2.28
NKX6-2Q9C056 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.78□□□□□ -2.28
NKX6-2Q9C056 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.78□□□□□ -2.28
NKX6-2Q9C056 RN7SKP88-201ENST00000516847 250 ntBASIC0.78□□□□□ -2.28
NKX6-2Q9C056 RNA5SP404-201ENST00000517118 132 ntBASIC0.78□□□□□ -2.28
NKX6-2Q9C056 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.78□□□□□ -2.28
NKX6-2Q9C056 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.78□□□□□ -2.28
NKX6-2Q9C056 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.78□□□□□ -2.28
NKX6-2Q9C056 AC027807.1-201ENST00000559921 996 ntBASIC0.78□□□□□ -2.28
NKX6-2Q9C056 AC090517.1-201ENST00000569307 266 ntBASIC0.78□□□□□ -2.28
NKX6-2Q9C056 AC112191.3-201ENST00000604371 277 ntBASIC0.78□□□□□ -2.28
NKX6-2Q9C056 7SK.8-201ENST00000612110 250 ntBASIC0.78□□□□□ -2.28
NKX6-2Q9C056 PCGEM1.1-201ENST00000613431 131 ntBASIC0.78□□□□□ -2.28
NKX6-2Q9C056 7SK.11-201ENST00000615477 250 ntBASIC0.78□□□□□ -2.28
NKX6-2Q9C056 7SK.13-201ENST00000622040 250 ntBASIC0.78□□□□□ -2.28
NKX6-2Q9C056 AC099654.5-201ENST00000636479 350 ntBASIC0.78□□□□□ -2.28
NKX6-2Q9C056 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
NKX6-2Q9C056 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
NKX6-2Q9C056 RNU6-552P-201ENST00000362869 119 ntBASIC0.77□□□□□ -2.29
NKX6-2Q9C056 U3.4-201ENST00000363352 213 ntBASIC0.77□□□□□ -2.29
NKX6-2Q9C056 RNU6-877P-201ENST00000383868 107 ntBASIC0.77□□□□□ -2.29
NKX6-2Q9C056 MIR194-1-201ENST00000384892 85 ntBASIC0.77□□□□□ -2.29
NKX6-2Q9C056 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.77□□□□□ -2.29
NKX6-2Q9C056 RN7SKP61-201ENST00000410642 295 ntBASIC0.77□□□□□ -2.29
NKX6-2Q9C056 RNU2-8P-201ENST00000410727 190 ntBASIC0.77□□□□□ -2.29
NKX6-2Q9C056 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.77□□□□□ -2.29
NKX6-2Q9C056 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.77□□□□□ -2.29
NKX6-2Q9C056 AL356583.2-201ENST00000426536 280 ntBASIC0.77□□□□□ -2.29
NKX6-2Q9C056 AC104850.1-201ENST00000435940 476 ntBASIC0.77□□□□□ -2.29
NKX6-2Q9C056 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.77□□□□□ -2.29
NKX6-2Q9C056 AC073910.1-201ENST00000445047 438 ntBASIC0.77□□□□□ -2.29
NKX6-2Q9C056 AL606662.1-201ENST00000445763 553 ntBASIC0.77□□□□□ -2.29
NKX6-2Q9C056 AL031274.1-201ENST00000450334 232 ntBASIC0.77□□□□□ -2.29
NKX6-2Q9C056 USP9YP12-201ENST00000450481 570 ntBASIC0.77□□□□□ -2.29
NKX6-2Q9C056 AL162395.1-201ENST00000457882 422 ntBASIC0.77□□□□□ -2.29
NKX6-2Q9C056 RN7SKP210-201ENST00000459176 261 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms