Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 CYCSP23-201ENST00000519781 313 ntBASIC0.74□□□□□ -2.29
TRIM4Q9C037 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.74□□□□□ -2.29
TRIM4Q9C037 AL138889.2-201ENST00000603883 242 ntBASIC0.74□□□□□ -2.29
TRIM4Q9C037 AC069114.2-201ENST00000604699 304 ntBASIC0.74□□□□□ -2.29
TRIM4Q9C037 AL512506.1-201ENST00000613918 449 ntBASIC0.74□□□□□ -2.29
TRIM4Q9C037 MIR2909-201ENST00000617113 69 ntBASIC0.74□□□□□ -2.29
TRIM4Q9C037 AC243829.3-201ENST00000622177 108 ntBASIC0.74□□□□□ -2.29
TRIM4Q9C037 OR4G3P-201ENST00000633500 913 ntBASIC0.74□□□□□ -2.29
TRIM4Q9C037 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.74□□□□□ -2.29
TRIM4Q9C037 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.73□□□□□ -2.29
TRIM4Q9C037 RNU6-560P-201ENST00000364007 108 ntBASIC0.73□□□□□ -2.29
TRIM4Q9C037 Y_RNA.412-201ENST00000384001 104 ntBASIC0.73□□□□□ -2.29
TRIM4Q9C037 RNU6-331P-201ENST00000384724 107 ntBASIC0.73□□□□□ -2.29
TRIM4Q9C037 MIR194-1-201ENST00000384892 85 ntBASIC0.73□□□□□ -2.29
TRIM4Q9C037 SNORA12-201ENST00000391162 147 ntBASIC0.73□□□□□ -2.29
TRIM4Q9C037 ELOCP17-201ENST00000414751 326 ntBASIC0.73□□□□□ -2.29
TRIM4Q9C037 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.73□□□□□ -2.29
TRIM4Q9C037 ELOCP9-201ENST00000418624 239 ntBASIC0.73□□□□□ -2.29
TRIM4Q9C037 RPS25P9-201ENST00000435591 252 ntBASIC0.73□□□□□ -2.29
TRIM4Q9C037 HMGN2P9-201ENST00000476875 229 ntBASIC0.73□□□□□ -2.29
TRIM4Q9C037 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.73□□□□□ -2.29
TRIM4Q9C037 AC005741.1-201ENST00000511094 432 ntBASIC0.73□□□□□ -2.29
TRIM4Q9C037 AC112206.3-201ENST00000514578 389 ntBASIC0.73□□□□□ -2.29
TRIM4Q9C037 SCARNA16.2-201ENST00000516520 172 ntBASIC0.73□□□□□ -2.29
TRIM4Q9C037 Y_RNA.689-201ENST00000516589 107 ntBASIC0.73□□□□□ -2.29
TRIM4Q9C037 RNA5SP481-201ENST00000516814 122 ntBASIC0.73□□□□□ -2.29
TRIM4Q9C037 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.73□□□□□ -2.29
TRIM4Q9C037 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.73□□□□□ -2.29
TRIM4Q9C037 AC008088.1-201ENST00000580993 280 ntBASIC0.73□□□□□ -2.29
TRIM4Q9C037 AC008507.2-201ENST00000588402 1176 ntBASIC0.73□□□□□ -2.29
TRIM4Q9C037 AC174048.1-201ENST00000603389 144 ntBASIC0.73□□□□□ -2.29
TRIM4Q9C037 AL596327.1-201ENST00000603629 213 ntBASIC0.73□□□□□ -2.29
TRIM4Q9C037 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
TRIM4Q9C037 RNU6-462P-201ENST00000362659 105 ntBASIC0.72□□□□□ -2.29
TRIM4Q9C037 RNU6-946P-201ENST00000383878 107 ntBASIC0.72□□□□□ -2.29
TRIM4Q9C037 RPS3AP36-201ENST00000398190 775 ntBASIC0.72□□□□□ -2.29
TRIM4Q9C037 RNU2-64P-201ENST00000411315 191 ntBASIC0.72□□□□□ -2.29
TRIM4Q9C037 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.72□□□□□ -2.29
TRIM4Q9C037 SNRPEP8-201ENST00000442866 260 ntBASIC0.72□□□□□ -2.29
TRIM4Q9C037 RPL31P3-201ENST00000458430 332 ntBASIC0.72□□□□□ -2.29
TRIM4Q9C037 RNU5F-2P-201ENST00000516066 82 ntBASIC0.72□□□□□ -2.29
TRIM4Q9C037 AP003049.1-201ENST00000529418 457 ntBASIC0.72□□□□□ -2.29
TRIM4Q9C037 CYP4A27P-201ENST00000567218 190 ntBASIC0.72□□□□□ -2.29
TRIM4Q9C037 AL031775.1-201ENST00000607014 887 ntBASIC0.72□□□□□ -2.29
TRIM4Q9C037 AC024060.1-201ENST00000607052 494 ntBASIC0.72□□□□□ -2.29
TRIM4Q9C037 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.72□□□□□ -2.29
TRIM4Q9C037 AL512427.1-201ENST00000618593 349 ntBASIC0.72□□□□□ -2.29
TRIM4Q9C037 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.72□□□□□ -2.29
TRIM4Q9C037 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.72□□□□□ -2.29
TRIM4Q9C037 MIR6866-201ENST00000638146 69 ntBASIC0.72□□□□□ -2.29
TRIM4Q9C037 AL442644.1-201ENST00000454390 3105 ntBASIC0.71□□□□□ -2.3
TRIM4Q9C037 RNU5E-6P-201ENST00000365574 115 ntBASIC0.71□□□□□ -2.3
TRIM4Q9C037 AL356776.1-201ENST00000406574 447 ntBASIC0.71□□□□□ -2.3
TRIM4Q9C037 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.71□□□□□ -2.3
TRIM4Q9C037 AC000111.3-201ENST00000433478 193 ntBASIC0.71□□□□□ -2.3
TRIM4Q9C037 AC006026.2-201ENST00000457376 180 ntBASIC0.71□□□□□ -2.3
TRIM4Q9C037 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.71□□□□□ -2.3
TRIM4Q9C037 AC079395.1-201ENST00000510981 262 ntBASIC0.71□□□□□ -2.3
TRIM4Q9C037 AC079140.3-201ENST00000511111 550 ntBASIC0.71□□□□□ -2.3
TRIM4Q9C037 LRRC34P2-201ENST00000514850 553 ntBASIC0.71□□□□□ -2.3
TRIM4Q9C037 SNORD60.2-201ENST00000516883 86 ntBASIC0.71□□□□□ -2.3
TRIM4Q9C037 RNA5SP503-201ENST00000517047 117 ntBASIC0.71□□□□□ -2.3
TRIM4Q9C037 AC004812.1-201ENST00000540773 146 ntBASIC0.71□□□□□ -2.3
TRIM4Q9C037 MIR3664-201ENST00000579074 99 ntBASIC0.71□□□□□ -2.3
TRIM4Q9C037 AL353778.1-201ENST00000603149 408 ntBASIC0.71□□□□□ -2.3
TRIM4Q9C037 AL451064.1-201ENST00000607718 471 ntBASIC0.71□□□□□ -2.3
TRIM4Q9C037 AL021879.1-201ENST00000611756 288 ntBASIC0.71□□□□□ -2.3
TRIM4Q9C037 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.71□□□□□ -2.3
TRIM4Q9C037 FRG1KP-201ENST00000623592 341 ntBASIC0.71□□□□□ -2.3
TRIM4Q9C037 RNA5SP347-201ENST00000362445 119 ntBASIC0.7□□□□□ -2.3
TRIM4Q9C037 RNU6-511P-201ENST00000363496 107 ntBASIC0.7□□□□□ -2.3
TRIM4Q9C037 SNORA4.1-201ENST00000364263 144 ntBASIC0.7□□□□□ -2.3
TRIM4Q9C037 SNORA63D-201ENST00000364359 132 ntBASIC0.7□□□□□ -2.3
TRIM4Q9C037 RNY3P13-201ENST00000365542 102 ntBASIC0.7□□□□□ -2.3
TRIM4Q9C037 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.7□□□□□ -2.3
TRIM4Q9C037 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.7□□□□□ -2.3
TRIM4Q9C037 ART2BP-201ENST00000453501 499 ntBASIC0.7□□□□□ -2.3
TRIM4Q9C037 RNA5SP216-201ENST00000516111 123 ntBASIC0.7□□□□□ -2.3
TRIM4Q9C037 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.7□□□□□ -2.3
TRIM4Q9C037 MIR3976-201ENST00000606807 139 ntBASIC0.7□□□□□ -2.3
TRIM4Q9C037 RNU6-87P-201ENST00000607561 108 ntBASIC0.7□□□□□ -2.3
TRIM4Q9C037 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.7□□□□□ -2.3
TRIM4Q9C037 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.7□□□□□ -2.3
TRIM4Q9C037 AC068647.2-201ENST00000637380 353 ntBASIC0.7□□□□□ -2.3
TRIM4Q9C037 MTND4P12-201ENST00000498999 1377 ntBASIC0.7□□□□□ -2.3
TRIM4Q9C037 RNU4-15P-201ENST00000362613 141 ntBASIC0.69□□□□□ -2.3
TRIM4Q9C037 RNU6-862P-201ENST00000362804 105 ntBASIC0.69□□□□□ -2.3
TRIM4Q9C037 RNU6-1019P-201ENST00000364424 107 ntBASIC0.69□□□□□ -2.3
TRIM4Q9C037 MTCO3P41-201ENST00000414801 328 ntBASIC0.69□□□□□ -2.3
TRIM4Q9C037 AC007969.2-201ENST00000441891 191 ntBASIC0.69□□□□□ -2.3
TRIM4Q9C037 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.69□□□□□ -2.3
TRIM4Q9C037 AC117454.1-201ENST00000491120 168 ntBASIC0.69□□□□□ -2.3
TRIM4Q9C037 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
TRIM4Q9C037 PSMC1P5-201ENST00000512850 177 ntBASIC0.69□□□□□ -2.3
TRIM4Q9C037 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.69□□□□□ -2.3
TRIM4Q9C037 LRRC6P1-201ENST00000532188 885 ntBASIC0.69□□□□□ -2.3
TRIM4Q9C037 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.69□□□□□ -2.3
TRIM4Q9C037 AC004817.2-201ENST00000561794 651 ntBASIC0.69□□□□□ -2.3
TRIM4Q9C037 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.69□□□□□ -2.3
TRIM4Q9C037 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 368.9 ms