Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-1Q9BYQ7 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
KRTAP4-1Q9BYQ7 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC1.1□□□□□ -2.23
KRTAP4-1Q9BYQ7 AC100821.1-201ENST00000523153 2479 ntBASIC1.1□□□□□ -2.23
KRTAP4-1Q9BYQ7 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
KRTAP4-1Q9BYQ7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC1.1□□□□□ -2.23
KRTAP4-1Q9BYQ7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
KRTAP4-1Q9BYQ7 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 RNU6-562P-201ENST00000362731 107 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 RNU6-1252P-201ENST00000363054 104 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 RNU6-1066P-201ENST00000363573 105 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 RNU6-270P-201ENST00000364131 105 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 Y_RNA.215-201ENST00000364204 112 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 RNY1P12-201ENST00000364251 105 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 RNU6-777P-201ENST00000364265 104 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 Y_RNA.272-201ENST00000364696 102 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 RNU6-1130P-201ENST00000365434 107 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 Y_RNA.367-201ENST00000365544 101 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 RNU6-128P-201ENST00000383976 107 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 RNU1-138P-201ENST00000384093 164 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 RNU6-80P-201ENST00000384195 107 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 RNU6-429P-201ENST00000384582 108 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 MIR569-201ENST00000385228 96 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 SNORA40-201ENST00000388090 126 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 SNORD115-46-201ENST00000390982 71 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 SNORD65-201ENST00000391079 73 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 AL513475.1-201ENST00000406602 315 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 RNU6-1064P-201ENST00000410626 104 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 RNY4P29-201ENST00000410801 97 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 RNU6-130P-201ENST00000411112 103 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 POLHP1-201ENST00000411806 470 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 AL138785.1-201ENST00000425821 331 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 HIGD1AP11-201ENST00000438361 280 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 AL138799.3-201ENST00000438968 350 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 RPEP5-201ENST00000441137 268 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 RPS26P30-201ENST00000443431 335 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 AL157827.1-201ENST00000447622 132 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 FABP5P13-201ENST00000452144 328 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 AL137159.1-201ENST00000452808 512 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 TRGVB-201ENST00000453257 471 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 TRBV26-201ENST00000456572 344 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 AP000893.1-201ENST00000474462 794 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 RNU6-397P-201ENST00000516226 104 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 RNU6-416P-201ENST00000516265 103 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 RNU6-426P-201ENST00000516464 97 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 RNU6-589P-201ENST00000516485 107 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 RNU6-911P-201ENST00000516523 104 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 Y_RNA.686-201ENST00000516548 134 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 RNU1-54P-201ENST00000517181 120 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 AC083923.1-201ENST00000523708 376 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 DEFB108E-201ENST00000524692 240 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 AC027288.2-201ENST00000553028 243 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 AMZ2P1-203ENST00000565833 850 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 MIR3186-201ENST00000577404 85 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 LRRC37A5P-203ENST00000580181 585 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 MIR4775-201ENST00000581168 75 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 MIR5002-201ENST00000584713 97 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 AC105224.1-201ENST00000587055 421 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 AC008521.1-201ENST00000587471 187 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 VN1R91P-201ENST00000594377 169 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 AP001486.3-201ENST00000615334 372 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 uc_338.34-201ENST00000617467 174 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 AC103705.1-201ENST00000619013 241 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 AC002064.3-201ENST00000623448 346 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 AC091953.2-201ENST00000623979 160 ntBASIC1.09□□□□□ -2.23
KRTAP4-1Q9BYQ7 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC1.09□□□□□ -2.24
KRTAP4-1Q9BYQ7 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
KRTAP4-1Q9BYQ7 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
KRTAP4-1Q9BYQ7 AL606537.1-201ENST00000607258 2011 ntBASIC1.08□□□□□ -2.24
KRTAP4-1Q9BYQ7 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.08□□□□□ -2.24
KRTAP4-1Q9BYQ7 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.08□□□□□ -2.24
KRTAP4-1Q9BYQ7 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
KRTAP4-1Q9BYQ7 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
KRTAP4-1Q9BYQ7 RNU6-28P-201ENST00000362378 107 ntBASIC1.08□□□□□ -2.24
KRTAP4-1Q9BYQ7 Y_RNA.25-201ENST00000362528 102 ntBASIC1.08□□□□□ -2.24
KRTAP4-1Q9BYQ7 Y_RNA.44-201ENST00000362676 108 ntBASIC1.08□□□□□ -2.24
KRTAP4-1Q9BYQ7 RNU6-227P-201ENST00000362865 103 ntBASIC1.08□□□□□ -2.24
KRTAP4-1Q9BYQ7 Y_RNA.226-201ENST00000364337 114 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms