Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC080128.1-201ENST00000474389 1917 ntBASIC3.27□□□□□ -1.89
RTFDC1Q9BY42 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
RTFDC1Q9BY42 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RTFDC1Q9BY42 RNU6-797P-201ENST00000363101 109 ntBASIC3.26□□□□□ -1.89
RTFDC1Q9BY42 Y_RNA.123-201ENST00000363338 102 ntBASIC3.26□□□□□ -1.89
RTFDC1Q9BY42 MIR181A2-201ENST00000384863 110 ntBASIC3.26□□□□□ -1.89
RTFDC1Q9BY42 CBX3P9-201ENST00000402326 552 ntBASIC3.26□□□□□ -1.89
RTFDC1Q9BY42 RNU6-370P-201ENST00000411008 104 ntBASIC3.26□□□□□ -1.89
RTFDC1Q9BY42 AL590556.1-201ENST00000423231 483 ntBASIC3.26□□□□□ -1.89
RTFDC1Q9BY42 Z82205.1-201ENST00000428456 297 ntBASIC3.26□□□□□ -1.89
RTFDC1Q9BY42 GPM6BP3-201ENST00000442797 145 ntBASIC3.26□□□□□ -1.89
RTFDC1Q9BY42 AL031659.1-201ENST00000447075 539 ntBASIC3.26□□□□□ -1.89
RTFDC1Q9BY42 MTND4P17-201ENST00000470444 350 ntBASIC3.26□□□□□ -1.89
RTFDC1Q9BY42 AIG1P1-201ENST00000503376 148 ntBASIC3.26□□□□□ -1.89
RTFDC1Q9BY42 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.26□□□□□ -1.89
RTFDC1Q9BY42 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.26□□□□□ -1.89
RTFDC1Q9BY42 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.26□□□□□ -1.89
RTFDC1Q9BY42 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.26□□□□□ -1.89
RTFDC1Q9BY42 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.26□□□□□ -1.89
RTFDC1Q9BY42 AL117336.2-201ENST00000602435 335 ntBASIC3.26□□□□□ -1.89
RTFDC1Q9BY42 AC137590.2-201ENST00000619709 240 ntBASIC3.26□□□□□ -1.89
RTFDC1Q9BY42 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
RTFDC1Q9BY42 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.26□□□□□ -1.89
RTFDC1Q9BY42 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.26□□□□□ -1.89
RTFDC1Q9BY42 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
RTFDC1Q9BY42 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RTFDC1Q9BY42 RNU4-73P-201ENST00000363164 141 ntBASIC3.25□□□□□ -1.89
RTFDC1Q9BY42 RNU6-461P-201ENST00000364195 107 ntBASIC3.25□□□□□ -1.89
RTFDC1Q9BY42 RNU6-968P-201ENST00000384076 107 ntBASIC3.25□□□□□ -1.89
RTFDC1Q9BY42 Y_RNA.504-201ENST00000384481 104 ntBASIC3.25□□□□□ -1.89
RTFDC1Q9BY42 SNORA26.3-201ENST00000391119 136 ntBASIC3.25□□□□□ -1.89
RTFDC1Q9BY42 RNU6-1140P-201ENST00000410517 106 ntBASIC3.25□□□□□ -1.89
RTFDC1Q9BY42 AL451074.5-201ENST00000415894 435 ntBASIC3.25□□□□□ -1.89
RTFDC1Q9BY42 USMG5P1-201ENST00000425964 177 ntBASIC3.25□□□□□ -1.89
RTFDC1Q9BY42 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.25□□□□□ -1.89
RTFDC1Q9BY42 AL121594.1-201ENST00000475906 575 ntBASIC3.25□□□□□ -1.89
RTFDC1Q9BY42 AP004217.1-201ENST00000480579 346 ntBASIC3.25□□□□□ -1.89
RTFDC1Q9BY42 AC026782.1-201ENST00000512952 449 ntBASIC3.25□□□□□ -1.89
RTFDC1Q9BY42 Y_RNA.675-201ENST00000516389 149 ntBASIC3.25□□□□□ -1.89
RTFDC1Q9BY42 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.25□□□□□ -1.89
RTFDC1Q9BY42 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.25□□□□□ -1.89
RTFDC1Q9BY42 AL359198.2-201ENST00000611836 194 ntBASIC3.25□□□□□ -1.89
RTFDC1Q9BY42 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RTFDC1Q9BY42 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
RTFDC1Q9BY42 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RTFDC1Q9BY42 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RTFDC1Q9BY42 AC108206.1-201ENST00000570186 4159 ntBASIC3.24□□□□□ -1.89
RTFDC1Q9BY42 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
RTFDC1Q9BY42 Y_RNA.259-201ENST00000364619 101 ntBASIC3.24□□□□□ -1.89
RTFDC1Q9BY42 U3.13-201ENST00000364804 214 ntBASIC3.24□□□□□ -1.89
RTFDC1Q9BY42 Y_RNA.431-201ENST00000384086 102 ntBASIC3.24□□□□□ -1.89
RTFDC1Q9BY42 Y_RNA.490-201ENST00000384413 102 ntBASIC3.24□□□□□ -1.89
RTFDC1Q9BY42 Y_RNA.594-201ENST00000410373 140 ntBASIC3.24□□□□□ -1.89
RTFDC1Q9BY42 RNU6-174P-201ENST00000410406 106 ntBASIC3.24□□□□□ -1.89
RTFDC1Q9BY42 RPL30P4-201ENST00000429309 333 ntBASIC3.24□□□□□ -1.89
RTFDC1Q9BY42 USP9YP30-201ENST00000430729 455 ntBASIC3.24□□□□□ -1.89
RTFDC1Q9BY42 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.24□□□□□ -1.89
RTFDC1Q9BY42 CYP2C59P-201ENST00000457790 269 ntBASIC3.24□□□□□ -1.89
RTFDC1Q9BY42 snoU13.15-201ENST00000459407 104 ntBASIC3.24□□□□□ -1.89
RTFDC1Q9BY42 snoU13.26-201ENST00000459452 105 ntBASIC3.24□□□□□ -1.89
RTFDC1Q9BY42 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.24□□□□□ -1.89
RTFDC1Q9BY42 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.24□□□□□ -1.89
RTFDC1Q9BY42 MTCO3P13-201ENST00000577757 781 ntBASIC3.24□□□□□ -1.89
RTFDC1Q9BY42 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.24□□□□□ -1.89
RTFDC1Q9BY42 AC060766.3-201ENST00000591442 263 ntBASIC3.24□□□□□ -1.89
RTFDC1Q9BY42 AC011494.1-201ENST00000596454 237 ntBASIC3.24□□□□□ -1.89
RTFDC1Q9BY42 AL356280.1-201ENST00000603614 379 ntBASIC3.24□□□□□ -1.89
RTFDC1Q9BY42 AP000654.2-201ENST00000605633 586 ntBASIC3.24□□□□□ -1.89
RTFDC1Q9BY42 AL359697.1-201ENST00000624879 587 ntBASIC3.24□□□□□ -1.89
RTFDC1Q9BY42 AC112487.2-201ENST00000637950 304 ntBASIC3.24□□□□□ -1.89
RTFDC1Q9BY42 MTND5P9-201ENST00000503854 1755 ntBASIC3.24□□□□□ -1.89
RTFDC1Q9BY42 KPNA2P1-201ENST00000458289 1591 ntBASIC3.24□□□□□ -1.89
RTFDC1Q9BY42 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.23□□□□□ -1.89
RTFDC1Q9BY42 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RTFDC1Q9BY42 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RTFDC1Q9BY42 RNA5SP240-201ENST00000365355 128 ntBASIC3.23□□□□□ -1.89
RTFDC1Q9BY42 RNU6-1286P-201ENST00000383871 107 ntBASIC3.23□□□□□ -1.89
RTFDC1Q9BY42 MIR29B2-201ENST00000385055 81 ntBASIC3.23□□□□□ -1.89
RTFDC1Q9BY42 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.23□□□□□ -1.89
RTFDC1Q9BY42 Y_RNA.653-201ENST00000459091 95 ntBASIC3.23□□□□□ -1.89
RTFDC1Q9BY42 ANXA2P1-201ENST00000505539 926 ntBASIC3.23□□□□□ -1.89
RTFDC1Q9BY42 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.23□□□□□ -1.89
RTFDC1Q9BY42 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.23□□□□□ -1.89
RTFDC1Q9BY42 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.23□□□□□ -1.89
RTFDC1Q9BY42 RPL30P11-203ENST00000598995 310 ntBASIC3.23□□□□□ -1.89
RTFDC1Q9BY42 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.23□□□□□ -1.89
RTFDC1Q9BY42 AC008121.3-201ENST00000618726 433 ntBASIC3.23□□□□□ -1.89
RTFDC1Q9BY42 MIR5739-201ENST00000619803 80 ntBASIC3.23□□□□□ -1.89
RTFDC1Q9BY42 AC233981.2-201ENST00000611524 1614 ntBASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 Y_RNA.2-201ENST00000362330 96 ntBASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 RNA5SP289-201ENST00000362332 137 ntBASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 SNORA51.4-201ENST00000364993 124 ntBASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 MIR218-1-201ENST00000384999 110 ntBASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 SNORA75.4-201ENST00000391278 119 ntBASIC3.22□□□□□ -1.89
RTFDC1Q9BY42 RNU6-1328P-201ENST00000410938 106 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms