Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 RNU6-181P-201ENST00000363225 107 ntBASIC1.72□□□□□ -2.13
RPAP1Q9BWH6 RNU6-105P-201ENST00000363909 104 ntBASIC1.72□□□□□ -2.13
RPAP1Q9BWH6 RNU6-743P-201ENST00000364151 106 ntBASIC1.72□□□□□ -2.13
RPAP1Q9BWH6 RNU6-1303P-201ENST00000364841 107 ntBASIC1.72□□□□□ -2.13
RPAP1Q9BWH6 RNU4-48P-201ENST00000365559 182 ntBASIC1.72□□□□□ -2.13
RPAP1Q9BWH6 MIR7-2-201ENST00000384970 110 ntBASIC1.72□□□□□ -2.13
RPAP1Q9BWH6 RNU11-3P-201ENST00000391111 133 ntBASIC1.72□□□□□ -2.13
RPAP1Q9BWH6 RN7SKP51-201ENST00000410781 304 ntBASIC1.72□□□□□ -2.13
RPAP1Q9BWH6 SRIP3-201ENST00000413200 219 ntBASIC1.72□□□□□ -2.13
RPAP1Q9BWH6 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.72□□□□□ -2.13
RPAP1Q9BWH6 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.72□□□□□ -2.13
RPAP1Q9BWH6 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.72□□□□□ -2.13
RPAP1Q9BWH6 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.72□□□□□ -2.13
RPAP1Q9BWH6 AC009646.1-201ENST00000510455 318 ntBASIC1.72□□□□□ -2.13
RPAP1Q9BWH6 LRRC34P2-201ENST00000514850 553 ntBASIC1.72□□□□□ -2.13
RPAP1Q9BWH6 RNU5F-2P-201ENST00000516066 82 ntBASIC1.72□□□□□ -2.13
RPAP1Q9BWH6 RNU6-970P-201ENST00000516312 107 ntBASIC1.72□□□□□ -2.13
RPAP1Q9BWH6 RNU6-445P-201ENST00000516949 107 ntBASIC1.72□□□□□ -2.13
RPAP1Q9BWH6 AC022880.1-201ENST00000534017 973 ntBASIC1.72□□□□□ -2.13
RPAP1Q9BWH6 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.72□□□□□ -2.13
RPAP1Q9BWH6 AC145350.1-201ENST00000567426 208 ntBASIC1.72□□□□□ -2.13
RPAP1Q9BWH6 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.72□□□□□ -2.13
RPAP1Q9BWH6 RMST_2.1-201ENST00000617263 136 ntBASIC1.72□□□□□ -2.13
RPAP1Q9BWH6 uc_338.11-201ENST00000619132 160 ntBASIC1.72□□□□□ -2.13
RPAP1Q9BWH6 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
RPAP1Q9BWH6 SNORD14D-201ENST00000384390 87 ntBASIC1.71□□□□□ -2.14
RPAP1Q9BWH6 RNA5SP212-201ENST00000391223 107 ntBASIC1.71□□□□□ -2.14
RPAP1Q9BWH6 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.71□□□□□ -2.14
RPAP1Q9BWH6 CBX3P6-201ENST00000430257 527 ntBASIC1.71□□□□□ -2.14
RPAP1Q9BWH6 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.71□□□□□ -2.14
RPAP1Q9BWH6 AC243964.1-201ENST00000441814 261 ntBASIC1.71□□□□□ -2.14
RPAP1Q9BWH6 KATNBL1P3-201ENST00000443475 909 ntBASIC1.71□□□□□ -2.14
RPAP1Q9BWH6 AC244505.5-201ENST00000443639 207 ntBASIC1.71□□□□□ -2.14
RPAP1Q9BWH6 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.71□□□□□ -2.14
RPAP1Q9BWH6 RNU1-98P-201ENST00000458992 160 ntBASIC1.71□□□□□ -2.14
RPAP1Q9BWH6 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.71□□□□□ -2.14
RPAP1Q9BWH6 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.71□□□□□ -2.14
RPAP1Q9BWH6 AP001893.2-201ENST00000526949 202 ntBASIC1.71□□□□□ -2.14
RPAP1Q9BWH6 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.71□□□□□ -2.14
RPAP1Q9BWH6 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.71□□□□□ -2.14
RPAP1Q9BWH6 Z94722.1-201ENST00000604328 474 ntBASIC1.71□□□□□ -2.14
RPAP1Q9BWH6 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.71□□□□□ -2.14
RPAP1Q9BWH6 AL353770.2-201ENST00000620024 78 ntBASIC1.71□□□□□ -2.14
RPAP1Q9BWH6 MIR1248-201ENST00000629190 106 ntBASIC1.71□□□□□ -2.14
RPAP1Q9BWH6 RNU6-1285P-201ENST00000363480 105 ntBASIC1.7□□□□□ -2.14
RPAP1Q9BWH6 Y_RNA.201-201ENST00000364052 96 ntBASIC1.7□□□□□ -2.14
RPAP1Q9BWH6 RNU6-1164P-201ENST00000364428 107 ntBASIC1.7□□□□□ -2.14
RPAP1Q9BWH6 RNU6-393P-201ENST00000384475 107 ntBASIC1.7□□□□□ -2.14
RPAP1Q9BWH6 BTF3L4P2-201ENST00000392798 346 ntBASIC1.7□□□□□ -2.14
RPAP1Q9BWH6 RNU4-46P-201ENST00000410818 138 ntBASIC1.7□□□□□ -2.14
RPAP1Q9BWH6 RNU6-1245P-201ENST00000411130 106 ntBASIC1.7□□□□□ -2.14
RPAP1Q9BWH6 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.7□□□□□ -2.14
RPAP1Q9BWH6 AC244636.1-201ENST00000421152 228 ntBASIC1.7□□□□□ -2.14
RPAP1Q9BWH6 AC133104.1-201ENST00000429100 218 ntBASIC1.7□□□□□ -2.14
RPAP1Q9BWH6 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.7□□□□□ -2.14
RPAP1Q9BWH6 MTND2P29-201ENST00000438595 412 ntBASIC1.7□□□□□ -2.14
RPAP1Q9BWH6 AL360221.1-201ENST00000445989 335 ntBASIC1.7□□□□□ -2.14
RPAP1Q9BWH6 MTND1P18-201ENST00000448191 573 ntBASIC1.7□□□□□ -2.14
RPAP1Q9BWH6 AC022364.2-201ENST00000457963 554 ntBASIC1.7□□□□□ -2.14
RPAP1Q9BWH6 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.7□□□□□ -2.14
RPAP1Q9BWH6 AC023790.1-201ENST00000482174 347 ntBASIC1.7□□□□□ -2.14
RPAP1Q9BWH6 ATP5EP1-201ENST00000510257 156 ntBASIC1.7□□□□□ -2.14
RPAP1Q9BWH6 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.7□□□□□ -2.14
RPAP1Q9BWH6 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.7□□□□□ -2.14
RPAP1Q9BWH6 AC115990.1-201ENST00000526957 301 ntBASIC1.7□□□□□ -2.14
RPAP1Q9BWH6 AC023050.3-201ENST00000541142 333 ntBASIC1.7□□□□□ -2.14
RPAP1Q9BWH6 AP005136.1-201ENST00000579765 429 ntBASIC1.7□□□□□ -2.14
RPAP1Q9BWH6 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.7□□□□□ -2.14
RPAP1Q9BWH6 AC009161.2-201ENST00000624626 138 ntBASIC1.7□□□□□ -2.14
RPAP1Q9BWH6 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.7□□□□□ -2.14
RPAP1Q9BWH6 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
RPAP1Q9BWH6 Y_RNA.112-201ENST00000363250 102 ntBASIC1.69□□□□□ -2.14
RPAP1Q9BWH6 RNU6-53P-201ENST00000365367 106 ntBASIC1.69□□□□□ -2.14
RPAP1Q9BWH6 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
RPAP1Q9BWH6 SNORA8-201ENST00000384574 139 ntBASIC1.69□□□□□ -2.14
RPAP1Q9BWH6 SNORD70.1-201ENST00000391007 85 ntBASIC1.69□□□□□ -2.14
RPAP1Q9BWH6 RNA5SP465-201ENST00000391195 109 ntBASIC1.69□□□□□ -2.14
RPAP1Q9BWH6 AL049545.1-201ENST00000401856 572 ntBASIC1.69□□□□□ -2.14
RPAP1Q9BWH6 RNU6-293P-201ENST00000411259 106 ntBASIC1.69□□□□□ -2.14
RPAP1Q9BWH6 AL590556.1-201ENST00000423231 483 ntBASIC1.69□□□□□ -2.14
RPAP1Q9BWH6 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.69□□□□□ -2.14
RPAP1Q9BWH6 RPS6P15-201ENST00000431996 751 ntBASIC1.69□□□□□ -2.14
RPAP1Q9BWH6 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.69□□□□□ -2.14
RPAP1Q9BWH6 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.69□□□□□ -2.14
RPAP1Q9BWH6 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.69□□□□□ -2.14
RPAP1Q9BWH6 AC068338.1-201ENST00000565567 176 ntBASIC1.69□□□□□ -2.14
RPAP1Q9BWH6 MIR4703-201ENST00000577728 79 ntBASIC1.69□□□□□ -2.14
RPAP1Q9BWH6 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.69□□□□□ -2.14
RPAP1Q9BWH6 MIR3660-201ENST00000584845 100 ntBASIC1.69□□□□□ -2.14
RPAP1Q9BWH6 AC063944.3-201ENST00000609969 533 ntBASIC1.69□□□□□ -2.14
RPAP1Q9BWH6 AC104073.3-201ENST00000610942 955 ntBASIC1.69□□□□□ -2.14
RPAP1Q9BWH6 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
RPAP1Q9BWH6 RNU6-434P-201ENST00000384376 107 ntBASIC1.68□□□□□ -2.14
RPAP1Q9BWH6 AC068050.1-201ENST00000394891 380 ntBASIC1.68□□□□□ -2.14
RPAP1Q9BWH6 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.68□□□□□ -2.14
RPAP1Q9BWH6 AL031667.1-201ENST00000440222 725 ntBASIC1.68□□□□□ -2.14
RPAP1Q9BWH6 PRPS1P1-201ENST00000445305 876 ntBASIC1.68□□□□□ -2.14
RPAP1Q9BWH6 AC093259.1-201ENST00000509755 300 ntBASIC1.68□□□□□ -2.14
RPAP1Q9BWH6 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.68□□□□□ -2.14
RPAP1Q9BWH6 MTND3P5-201ENST00000512798 333 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms